Mock Version: 1.2.17
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target armv7hl --nodeps /builddir/build/SPECS/lammps.spec'], chrootPath='/var/lib/mock/epel-1-armhfp-45df28d0a1aa9d8e97b148c9ac1d20e4879af938/root'shell=FalseprintOutput=Falseenv={'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'HOSTNAME': 'mock'}gid=135user='mockbuild'timeout=0logger=<mockbuild.trace_decorator.getLog object at 0x34a970>uid=996)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target armv7hl --nodeps /builddir/build/SPECS/lammps.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'HOSTNAME': 'mock'} and shell False
Building target platforms: armv7hl
Building for target armv7hl
Wrote: /builddir/build/SRPMS/lammps-20180117-1.el7.src.rpm
Child return code was: 0
ENTER ['do'](['bash', '--login', '-c', u'/usr/bin/rpmbuild -bb --target armv7hl --nodeps /builddir/build/SPECS/lammps.spec'], chrootPath='/var/lib/mock/epel-1-armhfp-45df28d0a1aa9d8e97b148c9ac1d20e4879af938/root'shell=Falseuid=996env={'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'HOSTNAME': 'mock'}gid=135user='mockbuild'timeout=0private_network=Truelogger=<mockbuild.trace_decorator.getLog object at 0x34a970>printOutput=False)
Executing command: ['bash', '--login', '-c', u'/usr/bin/rpmbuild -bb --target armv7hl --nodeps /builddir/build/SPECS/lammps.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'HOSTNAME': 'mock'} and shell False
Building target platforms: armv7hl
Building for target armv7hl
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.e3F5iu
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf lammps-patch_17Jan2018
+ /usr/bin/gzip -dc /builddir/build/SOURCES/lammps-patch_17Jan2018.tar.gz
+ /usr/bin/tar -xf -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd lammps-patch_17Jan2018
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.XuhQRk
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_17Jan2018
+ mkdir -p serial mpich openmpi
+ cd openmpi
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 18790 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module load mpi/openmpi-arm
++ /usr/bin/modulecmd sh load mpi/openmpi-arm
+ eval LD_LIBRARY_PATH=/usr/lib/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-arm' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-arm:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-arm' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-arm' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-arm' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-arm' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-arm' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-arm' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=mpi/openmpi-arm
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/openmpi-arm:/usr/share/man:/usr/local/share/man
++ export MANPATH
++ MPI_BIN=/usr/lib/openmpi/bin
++ export MPI_BIN
++ MPI_COMPILER=openmpi-arm
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-arm
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib/openmpi
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/openmpi-arm
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib/openmpi/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/openmpi-arm
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-arm
++ export MPI_SYSCONFIG
++ PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/mpi/openmpi-arm
++ export _LMFILES_
+ export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro '
+ export LDFLAGS
+ /usr/bin/cmake3 -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=ON -DENABLE_ALL=ON -DLAMMPS_XDR=ON -DENABLE_PYTHON=ON -DENABLE_VORONOI=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.4/site-packages -DENABLE_GPU=ON -DGPU_API=OpenCL -DFFT=FFTW3 -DENABLE_MPI=ON -DENABLE_MPIIO=ON -DCMAKE_INSTALL_BINDIR=/usr/lib/openmpi/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib/openmpi/lib '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags' '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags' ../cmake
-- The C compiler identification is GNU 4.8.5
-- The CXX compiler identification is GNU 4.8.5
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found MPI_C: /usr/lib/openmpi/lib/libmpi.so  
-- Found MPI_CXX: /usr/lib/openmpi/lib/libmpi_cxx.so;/usr/lib/openmpi/lib/libmpi.so  
-- The Fortran compiler identification is GNU 4.8.5
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Performing Test FC_HAS_NO_SECOND_UNDERSCORE
-- Performing Test FC_HAS_NO_SECOND_UNDERSCORE - Success
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.27.1") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.3
-- Found FFTW3: /usr/lib/libfftw3.so  
-- Found PythonInterp: /usr/bin/python (found version "2.7.5") 
-- Found PythonLibs: /usr/lib/libpython3.4m.so (found version "3.4.5") 
-- Found JPEG: /usr/lib/libjpeg.so  
-- Found ZLIB: /usr/lib/libz.so (found version "1.2.7") 
-- Found PNG: /usr/lib/libpng.so (found version "1.5.13") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing:  FFMPEG_EXECUTABLE) 
-- Found VORO: /usr/lib/libvoro++.so  
-- Looking for math.h
-- Looking for math.h - found
-- Looking for sin in m
-- Looking for sin in m - found
-- Looking for cos in m
-- Looking for cos in m - found
-- Looking for CL_VERSION_2_0
-- Looking for CL_VERSION_2_0 - found
-- Found OpenCL: /usr/lib/libOpenCL.so (found version "2.0") 
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/atom_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/beck_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/born_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/born_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/born_coul_wolf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/buck_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/buck_coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/buck_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/charmm_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/colloid_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/coul_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/device_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/dipole_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/dipole_lj_sf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/dpd_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/eam_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/ellipsoid_nbor_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/gauss_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj96_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj_class2_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj_coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj_coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj_coul_msm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj_cubic_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj_expand_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj_gromacs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj_sdk_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/lj_sdk_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/mie_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/morse_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/neighbor_cpu_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/neighbor_gpu_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/pppm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/re_squared_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/re_squared_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/soft_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/sw_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/table_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/tersoff_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/tersoff_mod_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/tersoff_zbl_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/vashishta_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/yukawa_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/yukawa_colloid_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/zbl_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/gayberne_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu/gayberne_lj_cl.h...
-- Generating style_angle.h...
-- Generating style_atom.h...
-- Generating style_body.h...
-- Generating style_bond.h...
-- Generating style_command.h...
-- Generating style_compute.h...
-- Generating style_dihedral.h...
-- Generating style_dump.h...
-- Generating style_fix.h...
-- Generating style_improper.h...
-- Generating style_integrate.h...
-- Generating style_kspace.h...
-- Generating style_minimize.h...
-- Generating style_nbin.h...
-- Generating style_npair.h...
-- Generating style_nstencil.h...
-- Generating style_ntopo.h...
-- Generating style_pair.h...
-- Generating style_reader.h...
-- Generating style_region.h...
-- Building package: ASPHERE
-- Building package: BODY
-- Building package: CLASS2
-- Building package: COLLOID
-- Building package: COMPRESS
-- Building package: CORESHELL
-- Building package: DIPOLE
-- Building package: GRANULAR
-- Building package: KSPACE
-- Building package: MANYBODY
-- Building package: MC
-- Building package: MEAM
-- Building package: MISC
-- Building package: MOLECULE
-- Building package: PERI
-- Building package: QEQ
-- Building package: REAX
-- Building package: REPLICA
-- Building package: RIGID
-- Building package: SHOCK
-- Building package: SNAP
-- Building package: SRD
-- Building package: PYTHON
-- Building package: MPIIO
-- Building package: VORONOI
-- Building package: GPU
-- <<< Build configuration >>>
   Build type       
   Install path     /usr
   Compilers and Flags:
   C++ Compiler     /usr/bin/c++
       Type         GNU
   C++ Flags        -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  
-- Fortran Compiler /usr/bin/gfortran 
           Type     GNU
   Fortran Flags    -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  
-- Linker flags:
   Executable      -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags
-- Shared libries  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags
-- Link libraries: /usr/lib/openmpi/lib/libmpi_cxx.so;/usr/lib/openmpi/lib/libmpi.so;/usr/lib/libfftw3.so;/usr/lib/libpython3.4m.so;/usr/lib/libjpeg.so;/usr/lib/libpng.so;/usr/lib/libz.so;/usr/lib/libz.so;/usr/lib/libvoro++.so;m;reax;meam;gpu
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi
+ /usr/bin/make -j4
/usr/bin/cmake3 -H/builddir/build/BUILD/lammps-patch_17Jan2018/cmake -B/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
make[1]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/make -f CMakeFiles/reax.dir/build.make CMakeFiles/reax.dir/depend
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make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles/meam.dir/DependInfo.cmake --color=
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles/reax.dir/DependInfo.cmake --color=
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles/gpu.dir/DependInfo.cmake --color=
Scanning dependencies of target meam
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
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                                                            1
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[  0%] Building Fortran object CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/openmpi-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/small.blk:3.7:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:29:
     $       na_local                                                   
       1
Warning: Nonconforming tab character at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:94.48:
      dimension nmolo2(nat),iseen(nmolmax),isee2(nmolmax)               
                                                1
Warning: Unused variable 'isee2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:94.33:
      dimension nmolo2(nat),iseen(nmolmax),isee2(nmolmax)               
                                 1
Warning: Unused variable 'iseen' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:94.22:
      dimension nmolo2(nat),iseen(nmolmax),isee2(nmolmax)               
                      1
Warning: Unused variable 'nmolo2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:989.17:
      dimension a(3),b(3),j(3)                                          
                 1
Warning: Unused variable 'a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:989.22:
      dimension a(3),b(3),j(3)                                          
                      1
Warning: Unused variable 'b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:989.27:
      dimension a(3),b(3),j(3)                                          
                           1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
[  1%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/openmpi-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:224.14:
      real*8 G,Gbar,gam,shp(3)                                          
              1
Warning: Unused variable 'g' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:224.23:
      real*8 G,Gbar,gam,shp(3)                                          
                       1
Warning: Unused variable 'gam' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:224.19:
      real*8 G,Gbar,gam,shp(3)                                          
                   1
Warning: Unused variable 'gbar' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:224.30:
      real*8 G,Gbar,gam,shp(3)                                          
                              1
Warning: Unused variable 'shp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:89.19:
      real*8 coef1a,coef1b,coef2a,coef2b                                
                   1
Warning: Unused variable 'coef1a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:89.26:
      real*8 coef1a,coef1b,coef2a,coef2b                                
                          1
Warning: Unused variable 'coef1b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:89.33:
      real*8 coef1a,coef1b,coef2a,coef2b                                
                                 1
Warning: Unused variable 'coef2a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:89.40:
      real*8 coef1a,coef1b,coef2a,coef2b                                
                                        1
Warning: Unused variable 'coef2b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:91.17:
      real*8 dC1a,dC1b,dC2a,dC2b                                        
                 1
Warning: Unused variable 'dc1a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:91.22:
      real*8 dC1a,dC1b,dC2a,dC2b                                        
                      1
Warning: Unused variable 'dc1b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:91.27:
      real*8 dC1a,dC1b,dC2a,dC2b                                        
                           1
Warning: Unused variable 'dc2a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:91.32:
      real*8 dC1a,dC1b,dC2a,dC2b                                        
                                1
Warning: Unused variable 'dc2b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:88.34:
      real*8 Cmin,Cmax,delc,ebound,rbound,a,coef1,coef2                 
                                  1
Warning: Unused variable 'ebound' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:85.60:
      real*8 xjtmp,yjtmp,zjtmp,delxik,delyik,delzik,rik2,rik            
                                                            1
Warning: Unused variable 'rik' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:86.60:
      real*8 xktmp,yktmp,zktmp,delxjk,delyjk,delzjk,rjk2,rjk            
                                                            1
Warning: Unused variable 'rjk' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:348.54:
      real*8 riksq,rjksq,xik,xjk,cikj,a,delc,sikj,fcij,rij              
                                                      1
Warning: Unused variable 'fcij' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:337.29:
      integer i,j,nmax,k,nk,m                                           
                             1
Warning: Unused variable 'm' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:348.58:
      real*8 riksq,rjksq,xik,xjk,cikj,a,delc,sikj,fcij,rij              
                                                          1
Warning: Unused variable 'rij' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:35.15:
      integer j,jn                                                      
               1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:35.18:
      integer j,jn                                                      
                  1
Warning: Unused variable 'jn' declared at (1)
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ucl_get_devices.cpp:25:0:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  1%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/openmpi-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:122.19:
              kk = pp                                                   
                   1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:61.38:
      real*8 B,r,recip,phi,phip,rhop,a                                  
                                      1
Warning: Unused variable 'a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:63.15:
      real*8 a0,a1,a1i,a1j,a2,a2i,a2j                                   
               1
Warning: Unused variable 'a0' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:64.25:
      real*8 a3i,a3j,a3i1,a3i2,a3j1,a3j2                                
                         1
Warning: Unused variable 'a3i1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:64.30:
      real*8 a3i,a3j,a3i1,a3i2,a3j1,a3j2                                
                              1
Warning: Unused variable 'a3i2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:64.35:
      real*8 a3i,a3j,a3i1,a3i2,a3j1,a3j2                                
                                   1
Warning: Unused variable 'a3j1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:64.40:
      real*8 a3i,a3j,a3i1,a3i2,a3j1,a3j2                                
                                        1
Warning: Unused variable 'a3j2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:82.21:
      real*8 arg,arg1,arg2                                              
                     1
Warning: Unused variable 'arg1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:82.26:
      real*8 arg,arg1,arg2                                              
                          1
Warning: Unused variable 'arg2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:83.47:
      real*8 arg1i1,arg1j1,arg1i2,arg1j2,arg2i2,arg2j2                  
                                               1
Warning: Unused variable 'arg2i2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:84.33:
      real*8 arg1i3,arg1j3,arg2i3,arg2j3,arg3i3,arg3j3                  
                                 1
Warning: Unused variable 'arg2i3' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:83.54:
      real*8 arg1i1,arg1j1,arg1i2,arg1j2,arg2i2,arg2j2                  
                                                      1
Warning: Unused variable 'arg2j2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:84.40:
      real*8 arg1i3,arg1j3,arg2i3,arg2j3,arg3i3,arg3j3                  
                                        1
Warning: Unused variable 'arg2j3' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:59.21:
      real*8 Eu,astar,astarp,third,sixth                                
                     1
Warning: Unused variable 'astar' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:59.28:
      real*8 Eu,astar,astarp,third,sixth                                
                            1
Warning: Unused variable 'astarp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:61.14:
      real*8 B,r,recip,phi,phip,rhop,a                                  
              1
Warning: Unused variable 'b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:67.15:
      real*8 b0,rhoa0j,drhoa0j,rhoa0i,drhoa0i                           
               1
Warning: Unused variable 'b0' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:68.15:
      real*8 b1,rhoa1j,drhoa1j,rhoa1i,drhoa1i                           
               1
Warning: Unused variable 'b1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:69.15:
      real*8 b2,rhoa2j,drhoa2j,rhoa2i,drhoa2i                           
               1
Warning: Unused variable 'b2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:70.22:
      real*8 a3,a3a,b3,rhoa3j,drhoa3j,rhoa3i,drhoa3i                    
                      1
Warning: Unused variable 'b3' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:57.49:
      real*8 xitmp,yitmp,zitmp,delij(3),delref(3),rij2,rij,rij3         
                                                 1
Warning: Unused variable 'delref' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.56:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                                                        1
Warning: Unused variable 'denom' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:62.27:
      real*8 sij,fcij,dfcij,ds(3)                                       
                           1
Warning: Unused variable 'dfcij' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.17:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                 1
Warning: Unused variable 'dg' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.28:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                            1
Warning: Unused variable 'dgbar' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:62.33:
      real*8 sij,fcij,dfcij,ds(3)                                       
                                 1
Warning: Unused variable 'ds' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:59.15:
      real*8 Eu,astar,astarp,third,sixth                                
               1
Warning: Unused variable 'eu' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:62.21:
      real*8 sij,fcij,dfcij,ds(3)                                       
                     1
Warning: Unused variable 'fcij' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.14:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
              1
Warning: Unused variable 'g' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.32:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                                1
Warning: Unused variable 'gam' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.22:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                      1
Warning: Unused variable 'gbar' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:60.24:
      real*8 pp,phiforce,dUdrij,dUdsij,dUdrijm(3),force,forcem          
                        1
Warning: Unused variable 'phiforce' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:61.36:
      real*8 B,r,recip,phi,phip,rhop,a                                  
                                    1
Warning: Unused variable 'rhop' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.50:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                                                  1
Warning: Unused variable 'z' declared at (1)
[  2%] Linking CXX executable ocl_get_devices
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/c++   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard   -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/openmpi/lib -Wl,--enable-new-dtags CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ucl_get_devices.cpp.o  -o ocl_get_devices -rdynamic -lOpenCL 
Scanning dependencies of target gpu
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
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make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
[  2%] Built target ocl_get_devices
[  2%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/openmpi-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F.o
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F: In function 'srthb':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1529:0: warning: 'k1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ihb(nhb,6)=k1
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1530:0: warning: 'k2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ihb(nhb,7)=k2
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1531:0: warning: 'k3' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ihb(nhb,8)=k3
 ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:557.12:
        Z = Z_meam(a)                                                   
            1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:1031.11:
      kk = pp                                                           
           1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:179.31:
      real*8 phiaa,phibb,phitmp                                         
                               1
Warning: Unused variable 'phitmp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:174.20:
      real*8 r, temp                                                    
                    1
Warning: Unused variable 'temp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:343.15:
      real*8 a1,a2,a12                                                  
               1
Warning: Unused variable 'a1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:343.22:
      real*8 a1,a2,a12                                                  
                      1
Warning: Unused variable 'a12' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:343.18:
      real*8 a1,a2,a12                                                  
                  1
Warning: Unused variable 'a2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:357.29:
      character*3 latta,lattb                                           
                             1
Warning: Unused variable 'lattb' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:348.19:
      real*8 rhoa01,rhoa11,rhoa21,rhoa31                                
                   1
Warning: Unused variable 'rhoa01' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:349.19:
      real*8 rhoa02,rhoa12,rhoa22,rhoa32                                
                   1
Warning: Unused variable 'rhoa02' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:348.26:
      real*8 rhoa01,rhoa11,rhoa21,rhoa31                                
                          1
Warning: Unused variable 'rhoa11' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:349.26:
      real*8 rhoa02,rhoa12,rhoa22,rhoa32                                
                          1
Warning: Unused variable 'rhoa12' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:348.33:
      real*8 rhoa01,rhoa11,rhoa21,rhoa31                                
                                 1
Warning: Unused variable 'rhoa21' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:349.33:
      real*8 rhoa02,rhoa12,rhoa22,rhoa32                                
                                 1
Warning: Unused variable 'rhoa22' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:348.40:
      real*8 rhoa01,rhoa11,rhoa21,rhoa31                                
                                        1
Warning: Unused variable 'rhoa31' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:349.40:
      real*8 rhoa02,rhoa12,rhoa22,rhoa32                                
                                        1
Warning: Unused variable 'rhoa32' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:345.37:
      real*8 G1,G2,s1(3),s2(3),s12(3),rho0_1,rho0_2                     
                                     1
Warning: Unused variable 's12' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:354.28:
      real*8 arat,scrn,scrn2                                            
                            1
Warning: Unused variable 'scrn2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:711.19:
      real*8 rratio,C,x,sijk                                            
                   1
Warning: Unused variable 'rratio' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:631.44:
      real*8 rhoa01,rhoa02,a1,a2,rho01,rho02                            
                                            1
Warning: Unused variable 'rho02' declared at (1)
[  2%] Building Fortran object CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/openmpi-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F.o
[  2%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/openmpi-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F:16.63:
      subroutine meam_setup_global(nelt, lat, z, ielement, atwt, alpha, 
                                                               1
Warning: Unused dummy argument 'atwt' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/small.blk:3.7:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:308:
     $       na_local                                                   
       1
Warning: Nonconforming tab character at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F: In function 'get_zij2':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:760:0: warning: 'numscr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       S = sijk**numscr
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:732.5:
 3500 format ('END')                                                    
     1
Warning: Label 3500 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:731.5:
 3400 format ('ENERGY',5x,f14.6)                                        
     1
Warning: Label 3400 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:730.5:
 3300 format ('UNIT ENERGY   kcal')                                     
     1
Warning: Label 3300 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:729.5:
 3200 format ('CONECT',12i6)                                            
     1
Warning: Label 3200 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:728.5:
 3100 format ('FORMAT CONECT (a6,12i6)')                                
     1
Warning: Label 3100 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:726.5:
 3000 format ('HETATM',1x,i5,1x,a5,1x,a3,1x,a1,1x,a5,3f10.5,1x,         
     1
Warning: Label 3000 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:724.5:
 2900 format ('FORMAT ATOM   (a6,1x,i5,1x,a5,1x,a3,1x,a1,1x,a5,',       
     1
Warning: Label 2900 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:723.5:
 2800 format ('TORSION RESTRAINT ',4i4,2f8.2,f8.4,f9.6)                 
     1
Warning: Label 2800 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:721.5:
 2700 format ('#                 At1 At2 At3 At3 Angle   Force1  ',     
     1
Warning: Label 2700 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:720.5:
 2600 format ('ANGLE RESTRAINT ',3i4,2f8.2,f8.4,f9.6)                   
     1
Warning: Label 2600 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:718.5:
 2500 format ('#               At1 At2 At3 Angle   Force1  Force2',     
     1
Warning: Label 2500 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:717.5:
 2400 format ('BOND RESTRAINT ',2i4,f8.4,f8.2,f8.5,f10.7)               
     1
Warning: Label 2400 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:715.5:
 2300 format ('#              At1 At2   R12    Force1  Force2  ',       
     1
Warning: Label 2300 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:714.5:
 2200 format ('CELLS ',6i5)                                             
     1
Warning: Label 2200 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:713.5:
 2100 format ('CRYSTX ',6f11.5)                                         
     1
Warning: Label 2100 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:712.5:
 2000 format ('RUTYPE ',a40)                                            
     1
Warning: Label 2000 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:711.5:
 1900 format ('FFIELD ',a40)                                            
     1
Warning: Label 1900 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:710.5:
 1800 format ('REMARK ',a60)                                            
     1
Warning: Label 1800 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:709.5:
 1700 format ('DESCRP ',a60)                                            
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Warning: Label 1700 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:708.5:
 1600 format ('XTLGRF',i4)                                              
     1
Warning: Label 1600 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:707.5:
 1500 format ('BIOGRF',i4)                                              
     1
Warning: Label 1500 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:702.5:
 1100 format (8i3,8f8.4)                                                
     1
Warning: Label 1100 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:689.5:
  320 format (3f10.4)                                                   
     1
Warning: Label 320 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:688.5:
  310 format (2x,a1,1x,a60)                                             
     1
Warning: Label 310 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:687.5:
  302 format (2x,a1,1x,2f6.2,a60)                                       
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Warning: Label 302 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:686.5:
  301 format (2x,a1,1x,f6.2,a60)                                        
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Warning: Label 301 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3297.5:
 2200 format ('CELLS ',6i5)                                             
     1
Warning: Label 2200 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3284.5:
 1900 format ('FFIELD ',a40)                                            
     1
Warning: Label 1900 at (1) defined but not used
[  2%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/openmpi-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1019.5:
 1070 format (f7.5)                                                     
     1
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1018.5:
 1060 format (i8)                                                       
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1017.5:
 1056 format (f9.4)                                                     
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1016.5:
 1055 format (f7.4)                                                     
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1015.5:
 1050 format (f7.3)                                                     
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1007.5:
   30 continue                                                          
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:861.20:
      ishock_type = 0.0d0 ! shock type. 0: simple impact; 1: compressing
                    1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1074.5:
   12 C(1,1)=ZERO                                                       
     1
Warning: Label 12 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1540.72:
      qfile(nprob)=qmol                                                 
                                                                        1
Warning: CHARACTER expression will be truncated in assignment (25/60) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2777.72:
      qvtype(nvrc,i1)=qstrana2                                          
                                                                        1
Warning: CHARACTER expression will be truncated in assignment (5/40) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2857.72:
      qetype(nerc,i1)=qstrana2                                          
                                                                        1
Warning: CHARACTER expression will be truncated in assignment (5/40) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:135.26:
        nn2_meam(i1,i2) = value                                         
                          1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:159.16:
        augt1 = value                                                   
                1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:173.17:
        ialloy = value                                                  
                 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:177.20:
        mix_ref_t = value                                               
                    1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:181.21:
        erose_form = value                                              
                     1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:189.26:
        zbl_meam(i1,i2) = value                                         
                          1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:193.22:
        emb_lin_neg = value                                             
                      1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:197.19:
        bkgd_dyn = value                                                
                   1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3867.5:
  400 format (8i3,8f8.4)                                                
     1
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1869:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1893.25:
      character*25 qfileh                                               
                         1
Warning: Unused variable 'qfileh' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1869:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1869:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1890.22:
      character*2 qrom                                                  
                      1
Warning: Unused variable 'qrom' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1869:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3154.20:
      character*2 qt                                                    
                    1
Warning: Unused variable 'qt' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:285.27:
      subroutine mdsav(node)                                            
                           1
Warning: Unused dummy argument 'node' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:309.49:
      dimension idum(mbond+3),bodum(mbond+3),qat2(2)                    
                                                 1
Warning: Unused variable 'qat2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:312.22:
      character*4 qext                                                  
                      1
Warning: Unused variable 'qext' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:753.24:
      character*20 qhulp                                                
                        1
Warning: Unused variable 'qhulp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:752.24:
      character*6 qident                                                
                        1
Warning: Unused variable 'qident' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3328.44:
     $sumtt,tmax,eaver,eav2,eav3,etot2,ediff)                           
                                            1
Warning: Unused dummy argument 'ediff' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3328.38:
     $sumtt,tmax,eaver,eav2,eav3,etot2,ediff)                           
                                      1
Warning: Unused dummy argument 'etot2' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3328.11:
     $sumtt,tmax,eaver,eav2,eav3,etot2,ediff)                           
           1
Warning: Unused dummy argument 'sumtt' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
[  2%] Building Fortran object CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/openmpi-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F: In function 'phi_meam':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:477:0: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
         rhobar2 = rho02/rho_bkgd2*G2
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:476:0: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
         rhobar1 = rho01/rho_bkgd1*G1
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building C object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/fm_exp.c.o
/usr/bin/cc  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/fm_exp.c.o   -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/fm_exp.c
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'stranal':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3675:0: warning: 'istart2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       qstrana2=qstrana1(istart2:iend-1)
 ^
[  2%] Building Fortran object CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/openmpi-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:313:16:   required from here
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable]
   int ii, vstart=0, iend=_inum;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/small.blk:3.7:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:220:
     $       na_local                                                   
       1
Warning: Nonconforming tab character at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:588.5:
   15 continue                                                          
     1
Warning: Label 15 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1111.5:
   25 ea=zero                                                           
     1
Warning: Label 25 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3887.5:
   10 continue                                                          
     1
Warning: Label 10 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2873.5:
    1 continue                                                          
     1
Warning: Label 1 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3800.5:
   10 continue                                                          
     1
Warning: Label 10 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3725.27:
      dimension a(3),b(3),j(3),dradc(3,3),drbdc(3,3),dtdc(3,3),         
                           1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3807.41:
      subroutine calvalhb (ja1,ja2,ja3,ix,iy,iz,arg,hr,dhrdc,dargdc)    
                                         1
Warning: Unused dummy argument 'ix' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3807.44:
      subroutine calvalhb (ja1,ja2,ja3,ix,iy,iz,arg,hr,dhrdc,dargdc)    
                                            1
Warning: Unused dummy argument 'iy' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3807.47:
      subroutine calvalhb (ja1,ja2,ja3,ix,iy,iz,arg,hr,dhrdc,dargdc)    
                                               1
Warning: Unused dummy argument 'iz' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3812.27:
      dimension a(3),b(3),j(3),dradc(3,3),drbdc(3,3),dtdc(3,3),         
                           1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3275.23:
      dimension a(3),da(6)                                              
                       1
Warning: Unused variable 'da' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3902.18:
      DIMENSION  A(3),DRDA(3),DADC(4),DRADC(3,4),DRBDC(3,4),            
                  1
Warning: Unused variable 'a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3904.10:
     $DNDC(3,4)                                                         
          1
Warning: Unused variable 'dndc' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3902.26:
      DIMENSION  A(3),DRDA(3),DADC(4),DRADC(3,4),DRBDC(3,4),            
                          1
Warning: Unused variable 'drda' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3903.44:
     $DRCDC(3,4),DHDDC(3,4),DHEDC(3,4),DRVDC(3,4),DTDC(3,4),            
                                            1
Warning: Unused variable 'drvdc' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3903.54:
     $DRCDC(3,4),DHDDC(3,4),DHEDC(3,4),DRVDC(3,4),DTDC(3,4),            
                                                      1
Warning: Unused variable 'dtdc' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3905.17:
      dimension j(4),dvdc1(3,3),dargdc1(3,3),dvdc2(3,3),dargdc2(3,3)    
                 1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
[  2%] Linking Fortran static library libmeam.a
/usr/bin/cmake3 -P CMakeFiles/meam.dir/cmake_clean_target.cmake
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/meam.dir/link.txt --verbose=1
/usr/bin/ar qc libmeam.a  CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_cleanup.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_data.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_final.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/fm_exp.c.o
/usr/bin/ranlib libmeam.a
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
[  2%] Built target meam
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F: In function 'boncor':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:474:0: warning: 'exphu4' may be used uninitialized in this function [-Wmaybe-uninitialized]
      $vp132*vp131*exphu4*2.0*bopio
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:481:0: warning: 'exphu3' may be used uninitialized in this function [-Wmaybe-uninitialized]
      $vp132*vp131*exphu4*2.0*bopi2o
 ^
[  2%] Building Fortran object CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/openmpi-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'staint':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1123:0: warning: 'pi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T1=HALF*PI
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1128:0: warning: 'two' may be used uninitialized in this function [-Wmaybe-uninitialized]
       IF (C(I,1).GE.ZERO.AND.C(I,2).LT.ZERO) T1=TWO*PI-T1
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/small.blk:3.7:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:46:
     $       na_local                                                   
       1
Warning: Nonconforming tab character at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:285.5:
   40 format ('    Iter.     a             b          c        px',     
     1
Warning: Label 40 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:284.5:
   30 format ('   Iter.  Tsys    Tzone1  Tset1   Tzone2  Tset2')        
     1
Warning: Label 30 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:281.5:
   20 format ('  Iter.      Ebond       Eatom       Elp        Emol',   
     1
Warning: Label 20 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:277.5:
   10 format ('   Iter. Nmol    Epot         Ekin      Etot ',          
     1
Warning: Label 10 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'molanal':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3596:0: warning: 'iend' may be used uninitialized in this function [-Wmaybe-uninitialized]
       iend=istart+5
 ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'readc':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:993:0: warning: 'nmmsav' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (mdstep.gt.0.or.nit.gt.0) nmm=nmmsav
 ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'writeen':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3398:0: warning: 'ittr' may be used uninitialized in this function [-Wmaybe-uninitialized]
      $trstra(i2),thg(ittr)
 ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F: In function 'efield':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3454:0: warning: 'vfieldx' may be used uninitialized in this function [-Wmaybe-uninitialized]
       efih=vfieldx*c1*c1c*ch(i1)*c(i1,1)
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F: In function 'restraint':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3662:0: warning: 'dist' may be used uninitialized in this function [-Wmaybe-uninitialized]
       dist=dist-rmstra1(i1)
 ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.cpp
[  3%] Linking Fortran static library libreax.a
/usr/bin/cmake3 -P CMakeFiles/reax.dir/cmake_clean_target.cmake
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/reax.dir/link.txt --verbose=1
/usr/bin/ar qc libreax.a  CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_charges.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F.o
/usr/bin/ranlib libreax.a
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
[  3%] Built target reax
[  3%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.cpp
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long_ext.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_ext.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp:533:16:   required from here
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
   int eflag, vflag;
              ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_alloy_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_fs_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne_ext.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.cpp.o
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[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long_ext.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye_ext.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long_ext.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand_ext.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_ext.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs_ext.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long_ext.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse_ext.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_kernel.h:27:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm_ext.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_ext.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod_ext.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl_ext.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta_ext.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_ext.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Linking CXX static library libgpu.a
/usr/bin/cmake3 -P CMakeFiles/gpu.dir/cmake_clean_target.cmake
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CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp.o 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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/angle.cpp
[ 16%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp
[ 17%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp:133:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp:338:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp:347:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp:350:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp: In member function 'int LAMMPS_NS::Atom::memcheck(const char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp:2261:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (strlen(memstr) + n >= memlength) {
                             ^
[ 17%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom_map.cpp.o
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[ 17%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom_vec.cpp.o
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[ 17%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom_vec_atomic.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, int, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp:925:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) |
                                                ^
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp
[ 18%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/change_box.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/change_box.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/citeme.cpp.o
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp:331:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp:334:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/citeme.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/citeme.cpp
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/comm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp:131:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute.cpp
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_aggregate_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_aggregate_atom.cpp
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp:715:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp:1503:17: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += dir;
                 ^
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angmom_chunk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angmom_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angmom_chunk.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp:821:9: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
         for (i = atom->nlocal; i < nlast; i++) {
         ^
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp:169:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp:167:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp:208:22: warning: 'ebuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ebuf[n] = 0.0;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp:202:17: warning: 'tbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           tbuf[n] = 180.0*acos(c)/MY_PI;
                 ^
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_centro_atom.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cluster_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cluster_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:315:28: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engrot;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:312:28: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engvib;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:318:30: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engtrans;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:306:28: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engpot;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:321:34: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = sqrt(omegasq);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:324:26: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = vvib;
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:201:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:201:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                             ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cna_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cna_atom.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com_chunk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com_chunk.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1511:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1512:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap >= boxhi[idim]) xremap -= prd[idim];
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1511:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1613:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1614:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap >= boxhi[jdim]) yremap -= prd[jdim];
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1613:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1746:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1747:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap >= boxhi[kdim]) zremap -= prd[kdim];
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1746:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                              ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_contact_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_contact_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:413:22: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  delta[idim] *= scale;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:263:59: warning: 'idim' may be used uninitialized in this function [-Wmaybe-uninitialized]
         maxvalue[idim] = force->numeric(FLERR,arg[iarg+3]);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:197:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"region") == 0) {
                        ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_coord_atom.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_erotate_sphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_erotate_sphere.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp:162:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp:161:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp:219:17: warning: 'pbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           pbuf[n] = 180.0*atan2(s,c)/MY_PI;
                 ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_erotate_sphere_atom.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_fragment_atom.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_gyration.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_gyration.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_gyration.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_gyration_chunk.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_global_atom.cpp:521:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_global_atom.cpp:452:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_heat_flux.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_inertia_chunk.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_ke.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_ke_atom.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp:163:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp:162:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp:218:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           cbuf[n] = 180.0*acos(c)/MY_PI;
                 ^
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[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_property_local.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp:205:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp:252:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_box.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/create_box.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_atoms.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_atoms.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp:657:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp:657:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp:229:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ranmol = new RanMars(lmp,molseed+comm->me);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp:119:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"basis") == 0) {
                        ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_bonds.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_bonds.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_bonds.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_bonds.cpp:103:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"special") == 0) {
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_bonds.cpp:122:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else if (style == SANGLE) {
          ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_zero.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_zero.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp:323:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp:332:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp:335:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp: In member function 'void LAMMPS_NS::DisplaceAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp:128:5: warning: 'd_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (d_dim == 0) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp:146:5: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (coord_dim == 0) {
     ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_cfg.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_cfg.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_cfg.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp:857:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp:857:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp:477:20: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->v = vhold;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp:476:20: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->x = xhold;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp:478:28: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->image = imagehold;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp:758:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp:758:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_dcd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_dcd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_dcd.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:1028:20: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
      if (choose[i] && (*ptr == 0.0 && values[i] == 0.0) || 
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:1033:20: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
      if (choose[i] && (*ptr == 0.0 && value == 0.0) || 
                    ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_local.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_local.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_local.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_movie.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_movie.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:1033:66: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:1027:66: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:831:55: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
       image->draw_cylinder(pt1,pt2,color,ldiamvalue,3);
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:1036:72: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else image->draw_cylinder(x[atom1],x[atom2],color,diameter,3);
                                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:1034:16: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
   (*ptr != 0.0 && value != 0.0))
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:531:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *values;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:530:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *ptr,*ptrhold;
                  ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_xyz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_xyz.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp: In member function 'virtual int LAMMPS_NS::DumpImage::modify_param(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:1300:23: warning: 'factor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int n = 6 + factor*nentry;
                       ^
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/error.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/error.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/error.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_adapt.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_adapt.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_adapt.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp:768:33: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
     tmp = MAX(nneigh,nneighfull);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp:768:33: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_addforce.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_addforce.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_addforce.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_atom.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_chunk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_chunk.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_chunk.cpp:1058:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp:537:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp:828:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp:482:34: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     values[lastindex][i] = scalar;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp:499:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp: In constructor 'LAMMPS_NS::FixAveHisto::FixAveHisto(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp:233:10: warning: 'kindflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else if (kindflag != kind)
          ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_aveforce.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_aveforce.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_box_relax.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_box_relax.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:700:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:911:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:971:9: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (lengthone != nrows)
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp:291:67: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
                                                                   ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_controller.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_controller.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:629:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else vector[i] += scalar;
                             ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:411:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (value == -1)
         ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deprecated.cpp.o
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[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_drag.cpp.o
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[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_dt_reset.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp:188:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
         set[index].style = VARIABLE;
                  ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_enforce2d.cpp.o
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[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_external.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_halt.cpp: In member function 'virtual void LAMMPS_NS::FixHalt::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_halt.cpp:188:40: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'LAMMPS_NS::bigint {aka long long int}' [-Wformat=]
           id,update->ntimestep,attvalue);
                                        ^
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_lineforce.cpp.o
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_minimize.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_minimize.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_minimize.cpp
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_momentum.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_momentum.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_momentum.cpp
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nh.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.cpp:17:0:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.h: In constructor 'LAMMPS_NS::FixNeighHistory::FixNeighHistory(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.h:76:12: warning: 'LAMMPS_NS::FixNeighHistory::valuepartner' will be initialized after [-Wreorder]
   double **valuepartner;        // values for the partners
            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.h:34:15: warning:   'LAMMPS_NS::Pair* LAMMPS_NS::FixNeighHistory::pair' [-Wreorder]
   class Pair *pair;             // ptr to pair style that uses neighbor history
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.cpp:36:1: warning:   when initialized here [-Wreorder]
 FixNeighHistory::FixNeighHistory(LAMMPS *lmp, int narg, char **arg) :
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp:847:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp:817:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp:787:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp: In constructor 'LAMMPS_NS::FixMove::FixMove(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp:176:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"units") == 0) {
                        ^
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nh_sphere.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_restrain.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_setforce.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_recenter.cpp: In member function 'virtual void LAMMPS_NS::FixRecenter::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_recenter.cpp:182:41: warning: 'bboxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_recenter.cpp:182:53: warning: 'bboxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_spring.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_vector.cpp:149:26: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     extarray = finalvalue;
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_tmd.cpp: In member function 'void LAMMPS_NS::FixTMD::readfile(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_tmd.cpp:457:7: warning: 'imageflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (imageflag)
       ^
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_harmonic.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj1043.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj1043.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj126.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj126.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall.cpp:77:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj93.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_reflect.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_region.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/force.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_reflect.cpp:66:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp:724:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&ngroup,sizeof(int),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp:736:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp:740:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(names[i],sizeof(char),n,fp);
                                                     ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_group.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_group.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp:516:31: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
           tdir[2] = camDir[2] * t;
                               ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_neigh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_neigh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_neigh.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp: In member function 'void LAMMPS_NS::Group::assign(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp:295:12: warning: 'category' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else if (category == MOLECULE) tattribute = atom->molecule;
            ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_store.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_store.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_store.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_time.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_time.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_time.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_var.cpp.o
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[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/improper.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_zero.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_zero.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp:329:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp:332:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/info.cpp.o
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   for (int i = 0; i < styles.size(); ++i) {
                                   ^
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[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/lattice.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/lattice.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/lattice.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/input.cpp: In member function 'void LAMMPS_NS::Input::partition()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/input.cpp:1151:3: warning: 'yesflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (yesflag) {
   ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_special.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_special.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/math_special.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp: In function 'void lammps_create_atoms(void*, int, LAMMPS_NS::tagint*, int*, double*, double*, LAMMPS_NS::imageint*, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp:1068:76: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'LAMMPS_NS::bigint {aka long long int}' [-Wformat=]
               "invalid total atoms %ld %ld",lmp->atom->natoms,natoms_prev+n);
                                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp:1068:76: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'LAMMPS_NS::bigint {aka long long int}' [-Wformat=]
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/memory.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/memory.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/memory.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/min.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/min.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/min.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:260:52: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:260:39: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:260:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[3] = c_phi*p[3] + s_phi*kp[3];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[2] = c_phi*p[2] + s_phi*kp[2];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[1] = c_phi*p[1] + s_phi*kp[1];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[0] = c_phi*p[0] + s_phi*kp[0];
                            ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/min_cg.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/molecule.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/molecule.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/molecule.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin_standard.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin_standard.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin_standard.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1363:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1380:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1383:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1386:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1389:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1392:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1395:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1405:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1422:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1425:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1428:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1431:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp);
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1434:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_atomonly.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_atomonly.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp:104:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp.o
/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp:1675:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp:1783:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp:110:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp:108:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp:108:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp:111:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp:109:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp:109:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_atomonly_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_atomonly_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp:105:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp:103:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp:103:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp:104:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp:108:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp:106:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp:106:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp:116:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp:114:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp:114:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp:140:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp:115:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp:148:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp:146:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp:146:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp:123:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp:121:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp:106:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp:104:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp:104:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp:115:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp:127:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (includegroup && !(mask[j] & bitmask)) continue;
                                       ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp:123:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp:121:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp:121:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp:91:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:174:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:132:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:130:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:130:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:152:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:72:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:220:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:178:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:176:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:176:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:153:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:71:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:220:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:221:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:219:29: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ilist_middle[inum] = i;
                             ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:182:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:140:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:160:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:72:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:169:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:130:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:128:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:128:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:148:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:76:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:114:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:189:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:149:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:147:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:147:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:168:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:78:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:117:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp:39:13: warning: unused variable 'm' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp:39:17: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp:46:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp:38:13: warning: unused variable 'm' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp:38:17: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp:45:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp:39:13: warning: unused variable 'm' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp:39:17: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp:46:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp:39:11: warning: unused variable 'm' [-Wunused-variable]
   int i,j,m,n,nn,bitmask;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp:39:15: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,m,n,nn,bitmask;
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp:46:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp:80:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newtoff.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp:40:11: warning: unused variable 'm' [-Wunused-variable]
   int i,j,m,n,nn,itag,jtag,bitmask;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp:40:15: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,m,n,nn,itag,jtag,bitmask;
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp:82:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipSize::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:36:17: warning: unused variable 'm' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:36:21: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:36:45: warning: unused variable 'dnum' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:36:50: warning: unused variable 'dnumbytes' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:37:10: warning: unused variable 'jtag' [-Wunused-variable]
   tagint jtag;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:40:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:42:7: warning: unused variable 'nlocal' [-Wunused-variable]
   int nlocal = atom->nlocal;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp:152:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp:153:36: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:223:67: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (posix_memalign(&ptr, LAMMPS_MEMALIGN, pagesize*sizeof(T)))
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp:64:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipSizeOff2on::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp:37:17: warning: unused variable 'm' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp:37:21: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp:37:45: warning: unused variable 'dnum' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp:37:50: warning: unused variable 'dnumbytes' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                                                  ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_2d.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_2d.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipSizeOff2onOneside::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:40:17: warning: unused variable 'm' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,flip,dnum,dnumbytes,tmp;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:40:21: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,flip,dnum,dnumbytes,tmp;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:40:50: warning: unused variable 'dnum' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,flip,dnum,dnumbytes,tmp;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:40:55: warning: unused variable 'dnumbytes' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,flip,dnum,dnumbytes,tmp;
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:41:10: warning: unused variable 'jtag' [-Wunused-variable]
   tagint jtag;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:44:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_3d.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_3d.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_ghost_bin_2d.cpp.o
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[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:282:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:286:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&AA[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:287:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&BB[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:288:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&aa[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:289:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:290:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&beta[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:321:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:322:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:334:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:338:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:339:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:340:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:341:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:342:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:343:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:374:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:375:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:376:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:377:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:1656:5: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (rsq < cutsq[itype][jtype]) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:1667:32: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (atom->q) atom->q = q_hold;
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:408:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (msmflag) ftable[i] = qqrd2e/r * fgamma;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:395:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * egamma;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:399:30: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * derfc;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:409:61: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:409:56: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                        ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:372:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:373:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:374:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:375:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:407:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:410:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:411:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:168:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp.o
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:164:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:165:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:169:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:164:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:489:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:490:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:484:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:485:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:484:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:369:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:370:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:371:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:373:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:374:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:406:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:407:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:408:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:410:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:312:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:316:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:317:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:318:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:348:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:349:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:350:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:351:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:487:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:488:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:482:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:483:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:482:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:171:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:168:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:172:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:373:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:374:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:406:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:409:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:467:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:467:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:146:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:146:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:249:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:252:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:276:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:277:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_streitz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_streitz.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp:153:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp:154:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp:155:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp:156:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:257:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:282:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:283:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:284:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:254:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:278:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:279:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:280:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:318:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:319:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:318:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:319:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:323:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:324:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:325:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:353:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:354:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:355:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:356:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:234:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:238:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:239:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:267:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_start,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:268:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_stop,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:269:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:270:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:271:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:285:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:289:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:290:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:318:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:319:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:320:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:668:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:685:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:688:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:694:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:698:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_lj[m],sizeof(double),4,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:701:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:705:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_coul[m],sizeof(double),4,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:612:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:616:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:617:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:618:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:647:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:648:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:649:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:650:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp:47:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:394:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:398:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:393:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:283:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:287:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:288:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:289:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:290:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:349:32: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:346:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:606:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:610:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:611:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:612:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:641:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:642:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:643:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:644:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:134:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:131:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:388:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:392:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:357:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:361:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:362:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:363:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:364:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:394:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:395:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:396:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:397:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:398:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:174:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:175:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:176:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:177:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:178:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:453:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:140:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:216:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:212:71: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:212:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:110:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:110:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:113:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:380:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:386:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:417:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:418:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:419:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:420:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:421:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:168:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:169:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:162:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:168:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:465:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:465:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:465:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:459:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:328:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:332:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:333:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:334:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:335:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:364:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:365:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:366:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:367:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:345:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:349:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:350:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:351:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:352:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:382:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:383:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:439:65: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:141:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:383:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:387:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:388:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:417:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:418:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:419:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:420:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:421:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:422:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:504:51: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:500:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:493:38: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tc*tc*tc * (coulsw3 + coulsw4*tc);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:160:58: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:170:59: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:166:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:166:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                              ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:356:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:360:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:361:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:362:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:363:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:393:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:394:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:395:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:396:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:454:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:453:60: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:449:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:144:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:143:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:139:27: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
                           ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:287:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:291:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:292:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:293:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:320:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:321:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:633:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:637:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:638:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:639:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamR[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:640:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamA[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:641:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:672:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:673:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:674:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:675:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:269:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:273:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:274:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:275:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:276:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:304:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:305:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:306:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:396:46: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_mie*forcemie*r2inv;
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:400:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:250:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:254:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&prefactor[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:255:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:280:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp: In member function 'void LAMMPS_NS::PairTable::read_table(LAMMPS_NS::PairTable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:378:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:380:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:381:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:387:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:415:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:977:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:978:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:979:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewaldflag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:980:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&pppmflag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:981:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&msmflag,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:982:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dispersionflag,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:983:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tip4pflag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:1042:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:1042:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:1039:35: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phi = tb->e[itable] + fraction*tb->de[itable];
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:177:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:177:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:174:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:256:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:260:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:261:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:288:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:289:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:290:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:291:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp:142:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
        (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp:176:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp:180:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp:205:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp:206:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&coeffflag,sizeof(int),1,fp);
                                       ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/python.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/python.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/python.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp:290:45: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                             ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/random_mars.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/random_mars.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/random_park.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/random_park.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp:688:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[5] = kme + 1;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp:687:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[4] = jme + 1;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp:686:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[3] = ime + 1;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp:882:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return index;
          ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp: In member function 'void LAMMPS_NS::ReadData::parse_keyword(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp:1952:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if ((blank == strlen(line)) || (line[blank] == '#')) {
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp:557:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp:485:29: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else lo[dim] = valuehalf;
                             ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::seek(LAMMPS_NS::bigint, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp:228:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp:1049:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::next(LAMMPS_NS::bigint, LAMMPS_NS::bigint, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp:298:5: warning: 'eofflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (eofflag) ntimestep = -1;
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp:270:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_search(char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:628:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (strlen(&ep->d_name[nbegin]) < n) {
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:302:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:306:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:309:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:313:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:319:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:379:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:382:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:391:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:395:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:401:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:1027:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(all_written_send_sizes,sizeof(int),nprocs_file,fp);
                                                                   ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader.cpp.o
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:1209:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(value,sizeof(char),n,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:1221:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(int),n,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:1232:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(double),n,fp);
                                              ^
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/reader.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_native.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_native.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_xyz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_xyz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_xyz.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cone.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp:192:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delz = xorig[2] - zs;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp:191:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].dely = xorig[1] - ys;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp:190:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delx = xorig[0] - xs;
                                  ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_intersect.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_intersect.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp:336:28: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   add_contact(0,x,xp,yp,zp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp:336:28: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp:336:28: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_plane.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_plane.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp:655:30: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     add_contact(0,x,xp,yp,zp);
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp:655:30: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp:655:30: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_prism.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_prism.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_prism.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_sphere.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_union.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/run.cpp:173:41: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (stopflag) update->endstep = stop;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/run.cpp:171:45: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (startflag) update->beginstep = start;
                                             ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/special.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/special.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/special.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/thermo.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/thermo.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/thermo.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/timer.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/timer.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/timer.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp: In member function 'void LAMMPS_NS::Set::set(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp:844:35: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
       quat[1] = xvalue * sintheta2;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp:1030:24: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
           quat[1] = 0.0;
                        ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/update.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/update.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/update.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::add_world(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp:190:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         } else if (strlen(str) == len-1) {
                                       ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp:149:38: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
   MPI_Comm_split(uorig,0,key,&uworld);
                                      ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:671:33: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
       fscanf(fp,"%d",&nextindex);
                                 ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/verlet.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/verlet.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:547:63: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(zvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:542:63: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(yvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:537:63: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(xvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:460:17: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vz *= zscale;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:456:17: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vy *= yscale;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:452:17: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vx *= xscale;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::ramp(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:650:3: warning: 'v_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (v_dim == 2 && domain->dimension == 2)
   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:672:3: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (coord_dim == 0) {
   ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:34:0:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/memory.h:172:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sfree(array[0]);
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:168:12: note: 'vhold' was declared here
   double **vhold;
            ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_data.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/write_data.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3882:39: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else argstack[nargstack++] = value;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp: In member function 'void LAMMPS_NS::WriteCoeff::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp:97:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(str,256,one);  // coeff
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp:101:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(str,256,one);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp:104:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(str,256,one);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:4631:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious,flag1,flag2;
       ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_restart.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/write_restart.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp: In member function 'void LAMMPS_NS::WriteDump::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp:84:16: warning: 'dump' may be used uninitialized in this function [-Wmaybe-uninitialized]
   dump->write();
                ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3955:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int index,nvec,nstride;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:4127:52: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (nvec > 1) xvalue = (double) i / (nvec-1);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:4140:5: warning: 'method' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (method == SLOPE) {
     ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_temp_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_temp_asphere.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:1170:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp:139:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertia[0] = tbonus[tri[i]].inertia[0];
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp:130:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         length = lbonus[line[i]].length;
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp:109:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nh_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nh_asphere.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nph_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nph_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nph_asphere.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:950:11: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *vstore;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3638:38: warning: 'newtree' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (tree) newtree->type = CWIGGLE;
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3644:37: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       double value = value1 + value2*(1.0-cos(omega*delta*update->dt));
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3347:42: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       argstack[nargstack++] = sqrt(value1);
                                          ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_npt_asphere.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::set(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:185:9: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int nfirst,nlast;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:206:22: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
     num[nvar] = nlast;
                      ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_tri.cpp.o
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[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nvt_asphere.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere_noforce.cpp:94:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = bonus[ellipsoid[i]].shape;
                                 ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:467:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:470:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:474:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:478:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:479:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:480:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:512:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamma,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:513:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&upsilon,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:514:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:515:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:516:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:517:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:445:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:448:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:452:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:456:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:457:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:458:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:486:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:487:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp:308:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/body_nparticle.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/body_nparticle.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:730:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:729:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:728:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:730:21: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:729:21: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:728:21: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:730:51: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:729:51: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:728:51: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:220:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp:382:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_body_local.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_body_local.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_temp_body.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_temp_body.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_temp_body.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:195:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_nh_body.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_nh_body.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_nph_body.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:376:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:377:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:378:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:379:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:381:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:382:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:383:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:385:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:386:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:387:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:388:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/pair_body.cpp: In member function 'virtual void LAMMPS_NS::PairBody::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/pair_body.cpp:328:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp:187:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp:188:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp:189:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp:190:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:840:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:841:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:842:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:843:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:844:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:845:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:847:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:848:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:849:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:850:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:852:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:853:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:854:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:855:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:857:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:858:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:859:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:860:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:862:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:863:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:864:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:865:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:867:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:868:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:869:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:870:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:872:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:873:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:874:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:876:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:877:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:878:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:609:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:610:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:612:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:613:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:614:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:615:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:616:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:617:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:314:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:315:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:316:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:345:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:346:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:347:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:348:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:364:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:368:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:369:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:401:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:402:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:825:58: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:462:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:462:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/fix_wall_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/fix_wall_colloid.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:405:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:409:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:410:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:411:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:442:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:445:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:446:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:447:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:448:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:537:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:537:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:530:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:530:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:533:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:528:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:176:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:181:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:184:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:184:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:178:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:610:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:614:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:615:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:650:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:651:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:652:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:653:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:654:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:655:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_target, sizeof(double),1,fp);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:656:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed, sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:657:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:658:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:659:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:660:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp:296:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp:245:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:309:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:241:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:401:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:405:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a12[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:406:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:407:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:408:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:409:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:439:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:440:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:441:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:544:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return factor_lj*phi;
                    ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU_poly.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU_poly.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:195:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:694:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:698:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:699:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:732:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:733:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:734:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:735:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:736:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:737:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:738:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:739:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:740:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1917:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1921:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1922:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1954:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1955:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1956:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1957:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1958:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1959:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1960:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1961:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate_poly.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate_poly.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_yukawa_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_yukawa_colloid.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_atom_gz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_atom_gz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_atom_gz.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_cfg_gz.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:148:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:144:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:145:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:149:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:144:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:189:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:181:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:186:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:190:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:183:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:183:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp:150:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp:147:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp:151:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_wolf_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_wolf_cs.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:187:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:179:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:184:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:187:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:181:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:181:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp:169:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp:174:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp:171:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp:171:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/atom_vec_dipole.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/atom_vec_dipole.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:542:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:518:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:542:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:542:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:548:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:545:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:184:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:189:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:193:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:186:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:186:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:441:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:448:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:480:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:496:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:500:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:501:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:502:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:531:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:532:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:533:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:303:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:238:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:245:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:355:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:356:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:357:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:387:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:388:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:389:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:390:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_freeze.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_freeze.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp.o
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[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran_region.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran_region.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hertz_history.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hertz_history.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::bonded_history(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp:797:56: warning: variable 'vrlmaginv' set but not used [-Wunused-but-set-variable]
   double relrot1,relrot2,relrot3,vrl1,vrl2,vrl3,vrlmag,vrlmaginv;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp:677:42: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ninserted_mols = ninserted_atoms / natom;
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp:693:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp:651:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
                                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp:500:30: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
         coords[0][3] = radtmp;
                              ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald_disp.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald_disp.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:540:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:566:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kn,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:567:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kt,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamman,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:569:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gammat,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:570:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&xmu,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:571:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dampflag,sizeof(int),1,fp);
                                      ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d_wrap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d_wrap.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable]
   int i,total,length,offset,num;
                      ^
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:427:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:431:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:432:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:433:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:434:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:435:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:436:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:470:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:471:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:472:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:473:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:474:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:475:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:568:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:569:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:561:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:561:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:564:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:559:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:189:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:186:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:185:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:190:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:191:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:183:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:192:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:248:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:249:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:244:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:243:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:404:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:409:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:410:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:411:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:443:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:446:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:447:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:448:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:449:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:539:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:539:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:532:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:532:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:535:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:530:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:184:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:176:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:181:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:184:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:178:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:185:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:182:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1640:47: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:181:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:185:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1639:47: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1638:47: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1637:47: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1636:47: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1635:47: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_directn[k] * qtmp2;
                                               ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:243:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:243:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:239:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:238:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:360:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_a_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_rho_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:366:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_c_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:367:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_buck_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:399:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_buck_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:400:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:401:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:402:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:403:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:404:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:405:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1995:50: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1994:50: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1993:50: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1992:50: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1991:50: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1990:50: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:297:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:300:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:326:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:327:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:328:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:329:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:330:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:377:29: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:379:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:379:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:377:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:161:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:166:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:163:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:163:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:152:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:147:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:149:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:149:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:207:31: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:209:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:209:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:207:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:830:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:834:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:835:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:836:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:837:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:871:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:872:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:873:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:874:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:875:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:387:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:415:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:387:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:421:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:418:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:974:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:969:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:521:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:555:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:552:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:524:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:516:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:516:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:519:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:900:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:904:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:905:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:906:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:907:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:939:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:940:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:941:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:942:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:943:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:944:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:945:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:197:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:206:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:199:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:199:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:206:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:217:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:221:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:214:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:214:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:221:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1053:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv + 
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1048:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1036:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1036:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1039:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1034:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:573:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:633:76: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcelj = r6inv * (lj1[itype][jtype]*r6inv - lj2[itype][jtype]);
                                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:590:27: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rinv = 1.0/r;
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:617:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:614:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:219:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:224:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:240:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv + 
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:238:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv - 
                                               ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:800:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:804:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:805:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:806:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:837:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:838:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:839:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:840:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:841:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:842:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:843:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:934:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:926:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:926:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:929:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:924:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:513:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:543:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:540:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:544:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:545:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:546:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:547:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:548:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:549:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:183:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:192:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:366:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:390:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:366:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:396:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:393:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:476:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:468:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:468:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:471:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:466:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:415:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:420:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:417:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:410:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:409:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:337:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:333:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:417:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:209:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:204:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:213:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:206:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:206:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:360:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:364:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:365:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:366:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:397:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:398:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:399:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:400:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:401:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:402:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1552:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1555:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1556:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1557:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1558:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1559:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1560:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:476:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:477:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:478:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:479:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:480:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:383:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:388:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:385:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:378:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:377:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:385:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:980:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:976:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:949:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:945:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_cg.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_cg.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:451:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:456:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:453:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:446:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:445:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:373:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:369:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:453:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:719:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:715:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:688:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:684:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1422:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1421:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1323:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1319:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp_tip4p.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_stagger.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp:164:32: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp:164:26: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                          ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo_morse.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:564:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:565:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:566:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:567:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:592:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:616:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:928:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3384:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3390:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3392:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3394:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3396:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3398:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3400:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3402:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3404:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3406:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3408:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3410:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3412:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3414:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3416:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3418:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3420:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3422:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3424:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3426:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3428:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3430:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3432:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3434:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3436:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3438:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3440:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3442:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3444:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3446:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3448:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3450:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3452:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3454:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3456:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3458:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3460:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3462:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3464:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3466:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3468:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3470:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3472:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3474:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3476:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3481:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3483:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3485:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3487:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3489:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3491:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3493:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3495:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3497:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3499:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3501:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3503:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3505:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3507:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3509:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3511:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3513:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3515:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3517:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3519:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3521:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3526:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3528:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3530:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3532:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3534:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3536:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3538:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3540:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3542:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3549:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3550:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3551:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3555:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3559:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3562:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3565:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3569:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3572:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3579:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3580:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3581:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3583:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3587:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3591:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3595:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3602:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3603:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3604:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3606:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3611:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3615:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3620:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3628:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3629:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3630:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3631:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3636:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3640:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3645:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3653:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3654:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3655:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3657:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3662:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3666:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3672:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3681:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3682:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3683:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3685:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3690:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3694:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3700:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3709:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3710:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3711:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3713:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3718:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3722:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3728:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3737:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3738:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3739:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3741:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3746:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3750:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3756:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:629:57: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fp,file->nr,&file->z2r[i][j][1]);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:1243:64: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4990:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for(j=0;j<strlen(s);j++) {
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5017:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for(j=0;j<strlen(s);j++) {
                       ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4981:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4982:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4987:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5016:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5083:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5085:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5087:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5091:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5096:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5100:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5102:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5104:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5113:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5120:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5124:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5128:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5130:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5134:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5136:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5140:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5142:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5146:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5148:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5152:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5154:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5158:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5160:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5162:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5171:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5178:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5186:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5194:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5202:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5209:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5213:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5230:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:4024:49: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (j > 0) df[1] += c * ((double) j) * xn * yn1;
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:4064:46: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (k > 0) df[2] += c * kr * xn * yn * zn1;
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::piRCSpline(double, double, double, int, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3285:10: warning: 'piRC' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return piRC;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5221:5: warning: 'nws' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nws==3) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4967:13: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,k,n,m;
             ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::read_lib()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:330:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:331:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:342:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:354:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:362:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:370:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:379:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,maxlib,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:388:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:395:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,maxlib,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:408:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:426:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:435:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
              fgets(s,maxlib,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:450:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:468:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:477:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,maxlib,fp);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:492:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:510:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:519:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,maxlib,fp);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::FLJ(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:813:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair = dC*dwij / rij;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:857:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:852:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:852:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:857:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:828:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:824:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkjS / rikS;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:847:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:852:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:857:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:852:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:828:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:847:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:883:76: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
             v_tally4(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS);
                                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:883:76: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:2314:44: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
             {com6+=prefac_ij2*pcrossk*dfc_k;}
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp: In member function 'double LAMMPS_NS::PairBOP::sigmaBo(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:3753:52: warning: 'xtmp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                   ,ftmp[2],xtmp[0],xtmp[1],xtmp[2]);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:3753:52: warning: 'xtmp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:3753:52: warning: 'xtmp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1763:42: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1763:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1764:35: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1775:51: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1500:38: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
             bt_sg[nb_jk].temp=temp_jk;
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:3641:30: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
               else if(temp_kk==temp_ji&&setting==0) {
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:1799:48: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
      prady  += 1.0 *  btor[2] * bbtor * att_eng;
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:1798:48: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::direct(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, int, int, int, double, double, double, double, double, double, double, double, double&, double&, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:2804:20: warning: 'dcurlji' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1n += dcurlji*iq*(afbn-fafbnl)*esucon/r;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:2807:20: warning: 'dcurlij' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1j += dcurlij*jq*(afbj-fafbnl)*esucon/r;
                    ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp: In member function 'virtual void LAMMPS_NS::PairEAM::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp:470:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp:471:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp:473:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp: In member function 'void LAMMPS_NS::PairEAM::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp:788:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloy::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:143:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:168:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:192:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:143:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:168:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:194:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:205:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw_zbl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw_zbl.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:210:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp:971:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp:975:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:986:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:992:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:993:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:994:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&gamma_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:995:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&A);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:996:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:997:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:998:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&alpha);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:999:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1000:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1001:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&d);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1002:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1003:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_4);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1004:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_6);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1005:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&L);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1006:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&kappa);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1007:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_0);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1008:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1009:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_0);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1010:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1_LR);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1011:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2_LR);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1012:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1013:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1015:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1016:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1017:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1018:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1019:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&delta);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1022:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1031:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1038:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; }
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1045:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1051:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_nb3b_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_nb3b_harmonic.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_rebo.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_rebo.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:579:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:580:60: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     while (line == strchr(line,'#')) fgets(line,MAXLINE,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:596:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:614:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:650:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:881:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_sw.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_sw.cpp
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff.cpp
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff_mod.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff_mod.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:262:7: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (emb > epsilon) {
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:290:82: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
                                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:290:82: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:290:82: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_create.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_create.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_atom_swap.cpp: In member function 'int LAMMPS_NS::FixAtomSwap::attempt_semi_grand()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_atom_swap.cpp:391:54: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
         atom->v[i][0] *= sqrt_mass_ratio[itype][jtype];
                                                      ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_gcmc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_gcmc.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_tfmc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_tfmc.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:629:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jlast]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:607:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jprev]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:202:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:618:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (iangle = 0; iangle < num_angle[ilast]; iangle++) {
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:491:39: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (iprev >= 0) iprevtag = tag[iprev];
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:202:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:414:53: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jnextangletype,i,jnext,jlast) +
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:419:49: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jangletype,jprev,j,jnext) -
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:418:53: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(inextangletype,i,inext,ilast) -
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:413:56: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             delta += angle_eng(iangletype,iprev,i,jnext) +
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:457:37: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jbond = 0; jbond < num_bond[j]; jbond++)
                                     ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MEAM/pair_meam.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MEAM/pair_meam.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MEAM/pair_meam.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_msd_nongauss.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_msd_nongauss.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:350:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:354:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:355:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:383:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:384:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&max_cell_size,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:385:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:386:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:387:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_ti.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_ti.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:559:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (size >= num && num_of_bits < 32) {
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:600:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (bytes[num_of_bytes] >= num) {
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:654:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (num_of_bits >= num_of_bytes * 8) {
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:655:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes; i++) {
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:660:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes-1; i++) {
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:695:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (lastbits < num_of_bits) {
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:397:54: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define LASTIDX (sizeof(magicints) / sizeof(int) - 1 )
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:935:23: note: in expansion of macro 'LASTIDX'
     while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:46:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:939:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:46:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:1115:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_efield.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_efield.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:1141:54: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[2] = receivebits(buf, bitsizeint[2]);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:1140:54: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[1] = receivebits(buf, bitsizeint[1]);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:1139:54: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[0] = receivebits(buf, bitsizeint[0]);
                                                      ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_gld.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_gld.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp:530:56: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else atom->avec->create_atom(ntype+onemols[imol]->type[m],coords[m]);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp:324:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else if (me == proc && i == iatom) {
                               ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_oneway.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_oneway.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_oneway.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_orient_bcc.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:329:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:333:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:334:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:335:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:336:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:337:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:367:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:368:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:369:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:370:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:381:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp.o
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:385:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:386:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:387:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:388:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:389:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:390:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:422:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:423:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:424:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:425:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:426:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/xdr_compat.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/xdr_compat.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:486:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:151:58: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0n[itype][jtype]*rninv -
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:153:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0m[itype][jtype]*rminv) -
                                                          ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:427:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:431:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:432:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:433:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:434:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:435:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:468:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:469:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:470:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:471:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:472:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:473:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:474:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_delta.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_delta.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:560:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:560:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:563:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:558:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:570:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:187:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:192:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:197:50: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:198:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:189:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:189:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp:249:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp:250:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp:251:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp:252:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp:197:70: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                                      ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp:250:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp:251:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b[1],sizeof(int),atom->nangletypes,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp:252:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp:215:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp:216:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp:215:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp:216:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:292:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:293:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp: In member function 'void LAMMPS_NS::AngleTable::read_table(LAMMPS_NS::AngleTable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:385:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:387:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:388:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:394:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:403:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:405:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_angle.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_angle.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_angle.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_bond.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_full.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_molecular.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_molecular.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_molecular.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_template.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_template.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp:220:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp:221:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp:222:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp:223:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:229:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:230:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:231:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:232:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:233:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp:172:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp:173:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp:172:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp:173:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp:176:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&d0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp:177:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp:178:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp:171:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp:172:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp:173:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&lamda[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:281:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:282:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:283:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:284:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&rc[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:285:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&u0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:236:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:237:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp: In member function 'void LAMMPS_NS::BondTable::read_table(LAMMPS_NS::BondTable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:314:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:316:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:317:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:323:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:335:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:429:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:430:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:431:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:432:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:433:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:472:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:473:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:474:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:475:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:476:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp:333:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp:334:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp:335:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp:325:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:320:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:323:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:324:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp:335:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp:336:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp:337:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp:338:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:339:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:340:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:341:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:209:15: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:208:18: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp:280:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp:281:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp:323:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp: In member function 'double LAMMPS_NS::FixCMAP::dihedral_angle_atan2(double, double, double, double, double, double, double, double, double, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp:958:10: warning: 'angle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return angle;
          ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:153:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:302:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:379:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:386:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:445:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingLJ::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:512:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:123:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:502:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:375:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:168:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingMorse::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:415:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:201:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:134:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:134:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/atom_vec_peri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/atom_vec_peri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:437:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&epsilon[i][j],sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&sigma[i][j],sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:443:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&eps14[i][j],sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:444:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&sigma14[i][j],sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:477:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:478:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:621:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:627:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:667:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:673:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:534:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv + 
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:529:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:196:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv + 
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:194:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv - 
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:480:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:507:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:508:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:509:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:510:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:511:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:513:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:338:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:337:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:265:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:261:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_damage_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_damage_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:378:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_plasticity_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_plasticity_atom.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/fix_peri_neigh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/fix_peri_neigh.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp:106:11: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *theta;
           ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:570:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:574:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:575:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:576:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:577:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:578:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:579:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_yieldstress[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:495:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:499:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:500:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:501:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:502:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:503:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:424:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:428:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kspring[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:429:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:430:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:431:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_dynamic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_dynamic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_dynamic.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_fire.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_fire.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_fire.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:552:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:556:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:557:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:558:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:559:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:560:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:561:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_lambdai[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:562:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_taubi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp: In member function 'virtual int LAMMPS_NS::FixQEq::pack_forward_comm(int, int*, double*, int, int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp:486:10: warning: 'm' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return m;
          ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_point.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_point.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_point.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_shielded.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_event_prd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_event_prd.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp: In member function 'virtual void LAMMPS_NS::PairREAX::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp:177:30: warning: statement has no effect [-Wunused-value]
   FORTRAN(cbkabo, CBKABO).abo;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp: In member function 'void LAMMPS_NS::PairREAX::cg_solve(const int&, const int&, double*, int*, int*, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp:946:15: warning: variable 'zero' set but not used [-Wunused-but-set-variable]
   double one, zero, rho, rho_old, alpha, beta, gamma;
               ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_event_tad.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/prd.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/tad.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/tad.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/tad.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/neb.cpp: In member function 'void LAMMPS_NS::NEB::run()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/neb.cpp:306:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (uscreen)
        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/neb.cpp:320:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (ulogfile)
        ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/temper.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp:612:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp:612:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp:612:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                                          ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/verlet_split.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/compute_erotate_rigid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/compute_erotate_rigid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/compute_erotate_rigid.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/compute_ke_rigid.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_ehex.cpp:203:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
      fshake = ((FixShake*) modify->fix[id_shake]);
                                                ^
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh_small.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:579:51: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + me);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:396:30: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][2] = zflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:395:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:394:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:358:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (domain->dimension == 2 && zflag == 1.0)
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:364:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:363:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:224:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (custom_flag) delete [] molecule;
                                ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph_small.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1442:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1437:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1421:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1365:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1364:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1364:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1587:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1574:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1536:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x1 = x[i][1] + ybox*yprd + zbox*yz;
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1535:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1535:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                        ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt_small.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2183:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2256:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2082:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (infile && inbody[ibody]) continue;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2063:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1980:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2045:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve_small.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt_small.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_shake.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_shake.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_shake.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_append_atoms.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_append_atoms.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_append_atoms.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_msst.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_msst.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2665:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (me == 0) fclose(fp);
                          ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_nphug.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_nphug.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1327:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1322:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1307:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1465:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1452:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_wall_piston.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2385:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_sna_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_sna_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:492:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + comm->me);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2471:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snad_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snad_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2269:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (infile && inbody[ibody]) continue;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2247:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2162:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2229:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snav_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snav_atom.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/sna.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/sna.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp:67:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp: In member function 'void LAMMPS_NS::PairSNAP::compute_optimized(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp:724:53: warning: 'endtime' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (time_guided) schedule_time_guided = endtime - starttime;
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp:477:9: warning: 'ielem' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int ielem;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp:724:53: warning: 'starttime' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (time_guided) schedule_time_guided = endtime - starttime;
                                                     ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp:91:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp:108:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2968:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       c1 = tbonus[tri[i]].c1;
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2956:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       length = lbonus[line[i]].length;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2940:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/pair_python.cpp.o
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/pair_python.cpp
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:3051:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       inertia = tbonus[tri[i]].inertia;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:3038:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       biglist[k].theta = lbonus[line[i]].theta;
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:3026:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:146:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_init, NULL);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:164:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:182:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate, NULL);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:200:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:219:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:237:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_reset_dt, NULL);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1019:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2685:37: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *c1 = tbonus[tri[i]].c1;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2705:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double length = lbonus[line[i]].length;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2702:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *shape = ebonus[ellipsoid[i]].shape;
                                              ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_atom_mpiio.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_atom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_atom_mpiio.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp:410:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   else if (format && strlen(format) != ninput+noutput)
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp:320:36: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     PyTuple_SetItem(pArgs,i,pValue);
                                    ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_cfg_mpiio.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_cfg_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_cfg_mpiio.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_custom_mpiio.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_custom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_custom_mpiio.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1550:33: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[2] = xbcollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1549:33: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[1] = xbcollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1548:33: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[0] = xbcollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1547:33: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[2] = xscollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1546:33: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[1] = xscollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1545:33: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[0] = xscollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1553:29: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[2] = normfirst[2];
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1552:29: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[1] = normfirst[1];
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1551:29: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[0] = normfirst[0];
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1578:32: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (collidestyle == SLIP && type == SPHERE)
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1583:33: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
         force_wall(v[i],vsnew,j);
                                 ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_xyz_mpiio.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_xyz_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_xyz_mpiio.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/restart_mpiio.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/fix_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/fix_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/fix_gpu.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pppm_gpu.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp:515:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for (j=0; j<narea.size(); ++j)
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp:530:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp:547:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         for( j=0; j<vlist.size(); j+=vlist[j]+1 ) {
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp:591:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp:240:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp:242:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp:282:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp:279:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp:279:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp:283:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_debye_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_dsf_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp:250:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp:250:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_tstat_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_tstat_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_tstat_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp:406:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp:231:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp:234:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp:231:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:249:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:253:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:253:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:256:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:284:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:270:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp:239:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp:236:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp:242:74: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp:222:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp:233:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp:225:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp:334:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp:334:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp:331:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp:339:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp:233:59: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp:335:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp:338:63: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       -r12[0],-r12[1],-r12[2]);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp:310:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp:313:73: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       fforce[2],-r12[0],-r12[1],-r12[2]);
                                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp:223:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:274:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:277:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp:302:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp:298:36: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (eflag) evdwl *= factor_lj;
                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:355:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:355:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:360:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp:283:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp:284:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp:288:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp:287:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongGPU::init_style()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:151:16: warning: unused variable 'cut' [-Wunused-variable]
         double cut = init_one(i,j);
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongGPU::init_style()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:154:10: warning: variable 'cut' set but not used [-Wunused-but-set-variable]
   double cut;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp:275:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp:276:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp:280:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp:280:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:282:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:287:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:284:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:284:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:324:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:328:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:321:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:321:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:328:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:306:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:311:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:315:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:308:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:380:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:405:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:425:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_sw_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:380:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:405:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:427:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:432:55: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (me == 0) grab(fptr,file->nr,&file->rhor[i][1]);
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:443:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_mod_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_mod_gpu.cpp
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_zbl_gpu.cpp
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/openmpi-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairVashishtaGPU::init_style()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp:154:24: warning: unused variable 'r0eps' [-Wunused-variable]
   double *cutsq, *r0, *r0eps, *gamma, *eta;
                        ^
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+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 18790 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' mpi/openmpi-arm = '' ']'
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module unload mpi/openmpi-arm
++ /usr/bin/modulecmd sh unload mpi/openmpi-arm
+ eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;'
++ MANPATH=/usr/share/man:/usr/local/share/man
++ export MANPATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ unset LD_LIBRARY_PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset PYTHONPATH
++ unset _LMFILES_
+ cd ..
+ cd mpich
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 18790 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module load mpi/mpich-arm
++ /usr/bin/modulecmd sh load mpi/mpich-arm
+ eval LD_LIBRARY_PATH=/usr/lib/mpich/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/mpich-arm' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/mpich/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich-arm' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/mpich-arm' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/mpich' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich-arm' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/mpich/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich-arm' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib/mpich/lib/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/mpich' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/mpich-arm' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib/mpich/lib
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=mpi/mpich-arm
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man
++ export MANPATH
++ MPI_BIN=/usr/lib/mpich/bin
++ export MPI_BIN
++ MPI_COMPILER=mpich-arm
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/mpich-arm
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib/mpich
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/mpich-arm
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib/mpich/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/mpich
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/mpich-arm
++ export MPI_SYSCONFIG
++ PATH=/usr/lib/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PKG_CONFIG_PATH=/usr/lib/mpich/lib/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ PYTHONPATH=/usr/lib/python2.7/site-packages/mpich
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/mpi/mpich-arm
++ export _LMFILES_
+ export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro '
+ export LDFLAGS
+ /usr/bin/cmake3 -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=ON -DENABLE_ALL=ON -DLAMMPS_XDR=ON -DENABLE_PYTHON=ON -DENABLE_VORONOI=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.4/site-packages -DENABLE_GPU=ON -DGPU_API=OpenCL -DFFT=FFTW3 -DENABLE_MPI=ON -DENABLE_MPIIO=ON -DCMAKE_INSTALL_BINDIR=/usr/lib/mpich/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib/mpich/lib '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/mpich/lib -Wl,--enable-new-dtags' '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/mpich/lib -Wl,--enable-new-dtags' ../cmake
-- The C compiler identification is GNU 4.8.5
-- The CXX compiler identification is GNU 4.8.5
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found MPI_C: /usr/lib/mpich/lib/libmpich.so;/usr/lib/mpich/lib/libopa.so;/usr/lib/mpich/lib/libmpl.so;/usr/lib/librt.so;/usr/lib/libpthread.so  
-- Found MPI_CXX: /usr/lib/mpich/lib/libmpichcxx.so;/usr/lib/mpich/lib/libmpich.so;/usr/lib/mpich/lib/libopa.so;/usr/lib/mpich/lib/libmpl.so;/usr/lib/librt.so;/usr/lib/libpthread.so  
-- The Fortran compiler identification is GNU 4.8.5
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Performing Test FC_HAS_NO_SECOND_UNDERSCORE
-- Performing Test FC_HAS_NO_SECOND_UNDERSCORE - Success
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.27.1") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.3
-- Found FFTW3: /usr/lib/libfftw3.so  
-- Found PythonInterp: /usr/bin/python (found version "2.7.5") 
-- Found PythonLibs: /usr/lib/libpython3.4m.so (found version "3.4.5") 
-- Found JPEG: /usr/lib/libjpeg.so  
-- Found ZLIB: /usr/lib/libz.so (found version "1.2.7") 
-- Found PNG: /usr/lib/libpng.so (found version "1.5.13") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing:  FFMPEG_EXECUTABLE) 
-- Found VORO: /usr/lib/libvoro++.so  
-- Looking for math.h
-- Looking for math.h - found
-- Looking for sin in m
-- Looking for sin in m - found
-- Looking for cos in m
-- Looking for cos in m - found
-- Looking for CL_VERSION_2_0
-- Looking for CL_VERSION_2_0 - found
-- Found OpenCL: /usr/lib/libOpenCL.so (found version "2.0") 
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/atom_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/beck_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/born_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/born_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/born_coul_wolf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/buck_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/buck_coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/buck_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/charmm_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/colloid_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/coul_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/device_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/dipole_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/dipole_lj_sf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/dpd_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/eam_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/ellipsoid_nbor_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/gauss_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj96_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj_class2_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj_coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj_coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj_coul_msm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj_cubic_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj_expand_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj_gromacs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj_sdk_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/lj_sdk_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/mie_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/morse_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/neighbor_cpu_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/neighbor_gpu_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/pppm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/re_squared_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/re_squared_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/soft_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/sw_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/table_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/tersoff_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/tersoff_mod_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/tersoff_zbl_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/vashishta_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/yukawa_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/yukawa_colloid_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/zbl_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/gayberne_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu/gayberne_lj_cl.h...
-- Generating style_angle.h...
-- Generating style_atom.h...
-- Generating style_body.h...
-- Generating style_bond.h...
-- Generating style_command.h...
-- Generating style_compute.h...
-- Generating style_dihedral.h...
-- Generating style_dump.h...
-- Generating style_fix.h...
-- Generating style_improper.h...
-- Generating style_integrate.h...
-- Generating style_kspace.h...
-- Generating style_minimize.h...
-- Generating style_nbin.h...
-- Generating style_npair.h...
-- Generating style_nstencil.h...
-- Generating style_ntopo.h...
-- Generating style_pair.h...
-- Generating style_reader.h...
-- Generating style_region.h...
-- Building package: ASPHERE
-- Building package: BODY
-- Building package: CLASS2
-- Building package: COLLOID
-- Building package: COMPRESS
-- Building package: CORESHELL
-- Building package: DIPOLE
-- Building package: GRANULAR
-- Building package: KSPACE
-- Building package: MANYBODY
-- Building package: MC
-- Building package: MEAM
-- Building package: MISC
-- Building package: MOLECULE
-- Building package: PERI
-- Building package: QEQ
-- Building package: REAX
-- Building package: REPLICA
-- Building package: RIGID
-- Building package: SHOCK
-- Building package: SNAP
-- Building package: SRD
-- Building package: PYTHON
-- Building package: MPIIO
-- Building package: VORONOI
-- Building package: GPU
-- <<< Build configuration >>>
   Build type       
   Install path     /usr
   Compilers and Flags:
   C++ Compiler     /usr/bin/c++
       Type         GNU
   C++ Flags        -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  
-- Fortran Compiler /usr/bin/gfortran 
           Type     GNU
   Fortran Flags    -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  
-- Linker flags:
   Executable      -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/mpich/lib -Wl,--enable-new-dtags
-- Shared libries  -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/mpich/lib -Wl,--enable-new-dtags
-- Link libraries: /usr/lib/mpich/lib/libmpichcxx.so;/usr/lib/mpich/lib/libmpich.so;/usr/lib/mpich/lib/libopa.so;/usr/lib/mpich/lib/libmpl.so;/usr/lib/librt.so;/usr/lib/libpthread.so;/usr/lib/libfftw3.so;/usr/lib/libpython3.4m.so;/usr/lib/libjpeg.so;/usr/lib/libpng.so;/usr/lib/libz.so;/usr/lib/libz.so;/usr/lib/libvoro++.so;m;reax;meam;gpu
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/lammps-patch_17Jan2018/mpich
+ /usr/bin/make -j4
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/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/mpich-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_final.F:50.60:
      real*8  rhob, G, dG, Gbar, dGbar, gam, shp(3), shpi(3), Z         
                                                            1
Warning: Unused variable 'shpi' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/small.blk:3.7:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:29:
     $       na_local                                                   
       1
Warning: Nonconforming tab character at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:166:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:22:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:94.48:
      dimension nmolo2(nat),iseen(nmolmax),isee2(nmolmax)               
                                                1
Warning: Unused variable 'isee2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:94.33:
      dimension nmolo2(nat),iseen(nmolmax),isee2(nmolmax)               
                                 1
Warning: Unused variable 'iseen' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:94.22:
      dimension nmolo2(nat),iseen(nmolmax),isee2(nmolmax)               
                      1
Warning: Unused variable 'nmolo2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:989.17:
      dimension a(3),b(3),j(3)                                          
                 1
Warning: Unused variable 'a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:989.22:
      dimension a(3),b(3),j(3)                                          
                      1
Warning: Unused variable 'b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:989.27:
      dimension a(3),b(3),j(3)                                          
                           1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
[  1%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/mpich-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F.o
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ucl_get_devices.cpp:25:0:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:224.14:
      real*8 G,Gbar,gam,shp(3)                                          
              1
Warning: Unused variable 'g' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:224.23:
      real*8 G,Gbar,gam,shp(3)                                          
                       1
Warning: Unused variable 'gam' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:224.19:
      real*8 G,Gbar,gam,shp(3)                                          
                   1
Warning: Unused variable 'gbar' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:224.30:
      real*8 G,Gbar,gam,shp(3)                                          
                              1
Warning: Unused variable 'shp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:89.19:
      real*8 coef1a,coef1b,coef2a,coef2b                                
                   1
Warning: Unused variable 'coef1a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:89.26:
      real*8 coef1a,coef1b,coef2a,coef2b                                
                          1
Warning: Unused variable 'coef1b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:89.33:
      real*8 coef1a,coef1b,coef2a,coef2b                                
                                 1
Warning: Unused variable 'coef2a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:89.40:
      real*8 coef1a,coef1b,coef2a,coef2b                                
                                        1
Warning: Unused variable 'coef2b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:91.17:
      real*8 dC1a,dC1b,dC2a,dC2b                                        
                 1
Warning: Unused variable 'dc1a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:91.22:
      real*8 dC1a,dC1b,dC2a,dC2b                                        
                      1
Warning: Unused variable 'dc1b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:91.27:
      real*8 dC1a,dC1b,dC2a,dC2b                                        
                           1
Warning: Unused variable 'dc2a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:91.32:
      real*8 dC1a,dC1b,dC2a,dC2b                                        
                                1
Warning: Unused variable 'dc2b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:88.34:
      real*8 Cmin,Cmax,delc,ebound,rbound,a,coef1,coef2                 
                                  1
Warning: Unused variable 'ebound' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:85.60:
      real*8 xjtmp,yjtmp,zjtmp,delxik,delyik,delzik,rik2,rik            
                                                            1
Warning: Unused variable 'rik' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:86.60:
      real*8 xktmp,yktmp,zktmp,delxjk,delyjk,delzjk,rjk2,rjk            
                                                            1
Warning: Unused variable 'rjk' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:348.54:
      real*8 riksq,rjksq,xik,xjk,cikj,a,delc,sikj,fcij,rij              
                                                      1
Warning: Unused variable 'fcij' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:337.29:
      integer i,j,nmax,k,nk,m                                           
                             1
Warning: Unused variable 'm' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:348.58:
      real*8 riksq,rjksq,xik,xjk,cikj,a,delc,sikj,fcij,rij              
                                                          1
Warning: Unused variable 'rij' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:35.15:
      integer j,jn                                                      
               1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:35.18:
      integer j,jn                                                      
                  1
Warning: Unused variable 'jn' declared at (1)
Scanning dependencies of target gpu
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
[  1%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp
[  1%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/mpich-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:122.19:
              kk = pp                                                   
                   1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:61.38:
      real*8 B,r,recip,phi,phip,rhop,a                                  
                                      1
Warning: Unused variable 'a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:63.15:
      real*8 a0,a1,a1i,a1j,a2,a2i,a2j                                   
               1
Warning: Unused variable 'a0' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:64.25:
      real*8 a3i,a3j,a3i1,a3i2,a3j1,a3j2                                
                         1
Warning: Unused variable 'a3i1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:64.30:
      real*8 a3i,a3j,a3i1,a3i2,a3j1,a3j2                                
                              1
Warning: Unused variable 'a3i2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:64.35:
      real*8 a3i,a3j,a3i1,a3i2,a3j1,a3j2                                
                                   1
Warning: Unused variable 'a3j1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:64.40:
      real*8 a3i,a3j,a3i1,a3i2,a3j1,a3j2                                
                                        1
Warning: Unused variable 'a3j2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:82.21:
      real*8 arg,arg1,arg2                                              
                     1
Warning: Unused variable 'arg1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:82.26:
      real*8 arg,arg1,arg2                                              
                          1
Warning: Unused variable 'arg2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:83.47:
      real*8 arg1i1,arg1j1,arg1i2,arg1j2,arg2i2,arg2j2                  
                                               1
Warning: Unused variable 'arg2i2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:84.33:
      real*8 arg1i3,arg1j3,arg2i3,arg2j3,arg3i3,arg3j3                  
                                 1
Warning: Unused variable 'arg2i3' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:83.54:
      real*8 arg1i1,arg1j1,arg1i2,arg1j2,arg2i2,arg2j2                  
                                                      1
Warning: Unused variable 'arg2j2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:84.40:
      real*8 arg1i3,arg1j3,arg2i3,arg2j3,arg3i3,arg3j3                  
                                        1
Warning: Unused variable 'arg2j3' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:59.21:
      real*8 Eu,astar,astarp,third,sixth                                
                     1
Warning: Unused variable 'astar' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:59.28:
      real*8 Eu,astar,astarp,third,sixth                                
                            1
Warning: Unused variable 'astarp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:61.14:
      real*8 B,r,recip,phi,phip,rhop,a                                  
              1
Warning: Unused variable 'b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:67.15:
      real*8 b0,rhoa0j,drhoa0j,rhoa0i,drhoa0i                           
               1
Warning: Unused variable 'b0' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:68.15:
      real*8 b1,rhoa1j,drhoa1j,rhoa1i,drhoa1i                           
               1
Warning: Unused variable 'b1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:69.15:
      real*8 b2,rhoa2j,drhoa2j,rhoa2i,drhoa2i                           
               1
Warning: Unused variable 'b2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:70.22:
      real*8 a3,a3a,b3,rhoa3j,drhoa3j,rhoa3i,drhoa3i                    
                      1
Warning: Unused variable 'b3' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:57.49:
      real*8 xitmp,yitmp,zitmp,delij(3),delref(3),rij2,rij,rij3         
                                                 1
Warning: Unused variable 'delref' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.56:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                                                        1
Warning: Unused variable 'denom' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:62.27:
      real*8 sij,fcij,dfcij,ds(3)                                       
                           1
Warning: Unused variable 'dfcij' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.17:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                 1
Warning: Unused variable 'dg' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.28:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                            1
Warning: Unused variable 'dgbar' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:62.33:
      real*8 sij,fcij,dfcij,ds(3)                                       
                                 1
Warning: Unused variable 'ds' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:59.15:
      real*8 Eu,astar,astarp,third,sixth                                
               1
Warning: Unused variable 'eu' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:62.21:
      real*8 sij,fcij,dfcij,ds(3)                                       
                     1
Warning: Unused variable 'fcij' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.14:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
              1
Warning: Unused variable 'g' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.32:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                                1
Warning: Unused variable 'gam' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.22:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                      1
Warning: Unused variable 'gbar' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:60.24:
      real*8 pp,phiforce,dUdrij,dUdsij,dUdrijm(3),force,forcem          
                        1
Warning: Unused variable 'phiforce' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:61.36:
      real*8 B,r,recip,phi,phip,rhop,a                                  
                                    1
Warning: Unused variable 'rhop' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.50:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                                                  1
Warning: Unused variable 'z' declared at (1)
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
[  2%] Linking CXX executable ocl_get_devices
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/c++   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard   -Wl,-z,relro  -Wl,-rpath -Wl,/usr/lib/mpich/lib -Wl,--enable-new-dtags CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ucl_get_devices.cpp.o  -o ocl_get_devices -rdynamic -lOpenCL 
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:313:16:   required from here
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable]
   int ii, vstart=0, iend=_inum;
       ^
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
[  2%] Built target ocl_get_devices
[  2%] Building Fortran object CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/mpich-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/small.blk:3.7:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:308:
     $       na_local                                                   
       1
Warning: Nonconforming tab character at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F: In function 'srthb':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1529:0: warning: 'k1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ihb(nhb,6)=k1
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1530:0: warning: 'k2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ihb(nhb,7)=k2
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1531:0: warning: 'k3' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ihb(nhb,8)=k3
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:732.5:
 3500 format ('END')                                                    
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:731.5:
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  301 format (2x,a1,1x,f6.2,a60)                                        
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[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.cpp
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 1900 format ('FFIELD ',a40)                                            
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   30 continue                                                          
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:861.20:
      ishock_type = 0.0d0 ! shock type. 0: simple impact; 1: compressing
                    1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1074.5:
   12 C(1,1)=ZERO                                                       
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1540.72:
      qfile(nprob)=qmol                                                 
                                                                        1
Warning: CHARACTER expression will be truncated in assignment (25/60) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2777.72:
      qvtype(nvrc,i1)=qstrana2                                          
                                                                        1
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2857.72:
      qetype(nerc,i1)=qstrana2                                          
                                                                        1
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Warning: Label 400 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1869:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1893.25:
      character*25 qfileh                                               
                         1
Warning: Unused variable 'qfileh' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1869:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1869:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1890.22:
      character*2 qrom                                                  
                      1
Warning: Unused variable 'qrom' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1869:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3154.20:
      character*2 qt                                                    
                    1
Warning: Unused variable 'qt' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:285.27:
      subroutine mdsav(node)                                            
                           1
Warning: Unused dummy argument 'node' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:309.49:
      dimension idum(mbond+3),bodum(mbond+3),qat2(2)                    
                                                 1
Warning: Unused variable 'qat2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:312.22:
      character*4 qext                                                  
                      1
Warning: Unused variable 'qext' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:753.24:
      character*20 qhulp                                                
                        1
Warning: Unused variable 'qhulp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:752.24:
      character*6 qident                                                
                        1
Warning: Unused variable 'qident' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
[  2%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/mpich-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3328.44:
     $sumtt,tmax,eaver,eav2,eav3,etot2,ediff)                           
                                            1
Warning: Unused dummy argument 'ediff' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3328.38:
     $sumtt,tmax,eaver,eav2,eav3,etot2,ediff)                           
                                      1
Warning: Unused dummy argument 'etot2' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3328.11:
     $sumtt,tmax,eaver,eav2,eav3,etot2,ediff)                           
           1
Warning: Unused dummy argument 'sumtt' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:557.12:
        Z = Z_meam(a)                                                   
            1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:1031.11:
      kk = pp                                                           
           1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:179.31:
      real*8 phiaa,phibb,phitmp                                         
                               1
Warning: Unused variable 'phitmp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:174.20:
      real*8 r, temp                                                    
                    1
Warning: Unused variable 'temp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:343.15:
      real*8 a1,a2,a12                                                  
               1
Warning: Unused variable 'a1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:343.22:
      real*8 a1,a2,a12                                                  
                      1
Warning: Unused variable 'a12' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:343.18:
      real*8 a1,a2,a12                                                  
                  1
Warning: Unused variable 'a2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:357.29:
      character*3 latta,lattb                                           
                             1
Warning: Unused variable 'lattb' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:348.19:
      real*8 rhoa01,rhoa11,rhoa21,rhoa31                                
                   1
Warning: Unused variable 'rhoa01' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:349.19:
      real*8 rhoa02,rhoa12,rhoa22,rhoa32                                
                   1
Warning: Unused variable 'rhoa02' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:348.26:
      real*8 rhoa01,rhoa11,rhoa21,rhoa31                                
                          1
Warning: Unused variable 'rhoa11' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:349.26:
      real*8 rhoa02,rhoa12,rhoa22,rhoa32                                
                          1
Warning: Unused variable 'rhoa12' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:348.33:
      real*8 rhoa01,rhoa11,rhoa21,rhoa31                                
                                 1
Warning: Unused variable 'rhoa21' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:349.33:
      real*8 rhoa02,rhoa12,rhoa22,rhoa32                                
                                 1
Warning: Unused variable 'rhoa22' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:348.40:
      real*8 rhoa01,rhoa11,rhoa21,rhoa31                                
                                        1
Warning: Unused variable 'rhoa31' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:349.40:
      real*8 rhoa02,rhoa12,rhoa22,rhoa32                                
                                        1
Warning: Unused variable 'rhoa32' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:345.37:
      real*8 G1,G2,s1(3),s2(3),s12(3),rho0_1,rho0_2                     
                                     1
Warning: Unused variable 's12' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:354.28:
      real*8 arat,scrn,scrn2                                            
                            1
Warning: Unused variable 'scrn2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:711.19:
      real*8 rratio,C,x,sijk                                            
                   1
Warning: Unused variable 'rratio' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:631.44:
      real*8 rhoa01,rhoa02,a1,a2,rho01,rho02                            
                                            1
Warning: Unused variable 'rho02' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F: In function 'get_zij2':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:760:0: warning: 'numscr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       S = sijk**numscr
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'stranal':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3675:0: warning: 'istart2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       qstrana2=qstrana1(istart2:iend-1)
 ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F: In function 'phi_meam':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:477:0: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
         rhobar2 = rho02/rho_bkgd2*G2
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:476:0: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
         rhobar1 = rho01/rho_bkgd1*G1
 ^
[  2%] Building Fortran object CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/mpich-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.cpp
[  2%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/mpich-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F:16.63:
      subroutine meam_setup_global(nelt, lat, z, ielement, atwt, alpha, 
                                                               1
Warning: Unused dummy argument 'atwt' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'staint':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1123:0: warning: 'pi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T1=HALF*PI
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1128:0: warning: 'two' may be used uninitialized in this function [-Wmaybe-uninitialized]
       IF (C(I,1).GE.ZERO.AND.C(I,2).LT.ZERO) T1=TWO*PI-T1
 ^
[  2%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/mpich-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:135.26:
        nn2_meam(i1,i2) = value                                         
                          1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:159.16:
        augt1 = value                                                   
                1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:173.17:
        ialloy = value                                                  
                 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:177.20:
        mix_ref_t = value                                               
                    1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:181.21:
        erose_form = value                                              
                     1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:189.26:
        zbl_meam(i1,i2) = value                                         
                          1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:193.22:
        emb_lin_neg = value                                             
                      1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:197.19:
        bkgd_dyn = value                                                
                   1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building C object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/fm_exp.c.o
/usr/bin/cc  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/fm_exp.c.o   -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/fm_exp.c
[  2%] Linking Fortran static library libmeam.a
/usr/bin/cmake3 -P CMakeFiles/meam.dir/cmake_clean_target.cmake
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/meam.dir/link.txt --verbose=1
/usr/bin/ar qc libmeam.a  CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_cleanup.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_data.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_final.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F.o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/fm_exp.c.o
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[  2%] Building Fortran object CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/mpich-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/small.blk:3.7:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:220:
     $       na_local                                                   
       1
Warning: Nonconforming tab character at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:588.5:
   15 continue                                                          
     1
Warning: Label 15 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1111.5:
   25 ea=zero                                                           
     1
Warning: Label 25 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3887.5:
   10 continue                                                          
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    1 continue                                                          
     1
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   10 continue                                                          
     1
Warning: Label 10 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3725.27:
      dimension a(3),b(3),j(3),dradc(3,3),drbdc(3,3),dtdc(3,3),         
                           1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3807.41:
      subroutine calvalhb (ja1,ja2,ja3,ix,iy,iz,arg,hr,dhrdc,dargdc)    
                                         1
Warning: Unused dummy argument 'ix' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3807.44:
      subroutine calvalhb (ja1,ja2,ja3,ix,iy,iz,arg,hr,dhrdc,dargdc)    
                                            1
Warning: Unused dummy argument 'iy' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3807.47:
      subroutine calvalhb (ja1,ja2,ja3,ix,iy,iz,arg,hr,dhrdc,dargdc)    
                                               1
Warning: Unused dummy argument 'iz' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3812.27:
      dimension a(3),b(3),j(3),dradc(3,3),drbdc(3,3),dtdc(3,3),         
                           1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3275.23:
      dimension a(3),da(6)                                              
                       1
Warning: Unused variable 'da' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3902.18:
      DIMENSION  A(3),DRDA(3),DADC(4),DRADC(3,4),DRBDC(3,4),            
                  1
Warning: Unused variable 'a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3904.10:
     $DNDC(3,4)                                                         
          1
Warning: Unused variable 'dndc' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3902.26:
      DIMENSION  A(3),DRDA(3),DADC(4),DRADC(3,4),DRBDC(3,4),            
                          1
Warning: Unused variable 'drda' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3903.44:
     $DRCDC(3,4),DHDDC(3,4),DHEDC(3,4),DRVDC(3,4),DTDC(3,4),            
                                            1
Warning: Unused variable 'drvdc' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3903.54:
     $DRCDC(3,4),DHDDC(3,4),DHEDC(3,4),DRVDC(3,4),DTDC(3,4),            
                                                      1
Warning: Unused variable 'dtdc' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3905.17:
      dimension j(4),dvdc1(3,3),dargdc1(3,3),dvdc2(3,3),dargdc2(3,3)    
                 1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'molanal':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3596:0: warning: 'iend' may be used uninitialized in this function [-Wmaybe-uninitialized]
       iend=istart+5
 ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F: In function 'boncor':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:474:0: warning: 'exphu4' may be used uninitialized in this function [-Wmaybe-uninitialized]
      $vp132*vp131*exphu4*2.0*bopio
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:481:0: warning: 'exphu3' may be used uninitialized in this function [-Wmaybe-uninitialized]
      $vp132*vp131*exphu4*2.0*bopi2o
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'readc':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:993:0: warning: 'nmmsav' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (mdstep.gt.0.or.nit.gt.0) nmm=nmmsav
 ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'writeen':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3398:0: warning: 'ittr' may be used uninitialized in this function [-Wmaybe-uninitialized]
      $trstra(i2),thg(ittr)
 ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.cpp
[  2%] Building Fortran object CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/usr/include/mpich-arm -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/small.blk:3.7:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:46:
     $       na_local                                                   
       1
Warning: Nonconforming tab character at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:285.5:
   40 format ('    Iter.     a             b          c        px',     
     1
Warning: Label 40 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:284.5:
   30 format ('   Iter.  Tsys    Tzone1  Tset1   Tzone2  Tset2')        
     1
Warning: Label 30 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:281.5:
   20 format ('  Iter.      Ebond       Eatom       Elp        Emol',   
     1
Warning: Label 20 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:277.5:
   10 format ('   Iter. Nmol    Epot         Ekin      Etot ',          
     1
Warning: Label 10 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F: In function 'efield':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3454:0: warning: 'vfieldx' may be used uninitialized in this function [-Wmaybe-uninitialized]
       efih=vfieldx*c1*c1c*ch(i1)*c(i1,1)
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F: In function 'restraint':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3662:0: warning: 'dist' may be used uninitialized in this function [-Wmaybe-uninitialized]
       dist=dist-rmstra1(i1)
 ^
[  3%] Linking Fortran static library libreax.a
/usr/bin/cmake3 -P CMakeFiles/reax.dir/cmake_clean_target.cmake
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/reax.dir/link.txt --verbose=1
/usr/bin/ar qc libreax.a  CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_charges.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F.o
/usr/bin/ranlib libreax.a
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
[  3%] Built target reax
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.cpp
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_ext.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp:533:16:   required from here
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
   int eflag, vflag;
              ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_alloy_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_fs_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss_ext.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne_ext.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long_ext.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_ext.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand_ext.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs_ext.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long_ext.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_kernel.h:27:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw_ext.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table_ext.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_ext.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod_ext.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl_ext.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta_ext.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Linking CXX static library libgpu.a
/usr/bin/cmake3 -P CMakeFiles/gpu.dir/cmake_clean_target.cmake
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CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp.o 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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp
[ 16%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp:133:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp:338:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp:347:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp:350:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp: In member function 'int LAMMPS_NS::Atom::memcheck(const char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp:2261:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (strlen(memstr) + n >= memlength) {
                             ^
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, int, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp:925:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) |
                                                ^
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp
[ 18%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/change_box.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/change_box.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/citeme.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/citeme.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/citeme.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp:331:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp:334:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp:131:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute.cpp
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_aggregate_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_aggregate_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp:715:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
                            ^
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp:1503:17: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += dir;
                 ^
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angmom_chunk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angmom_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angmom_chunk.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp:821:9: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
         for (i = atom->nlocal; i < nlast; i++) {
         ^
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp:169:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp:167:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp:208:22: warning: 'ebuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ebuf[n] = 0.0;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp:202:17: warning: 'tbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           tbuf[n] = 180.0*acos(c)/MY_PI;
                 ^
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp.o
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[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_centro_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_centro_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_centro_atom.cpp
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cluster_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cluster_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:315:28: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engrot;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:312:28: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engvib;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:318:30: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engtrans;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:306:28: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engpot;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:321:34: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = sqrt(omegasq);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:324:26: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = vvib;
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:201:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:201:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                             ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cna_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cna_atom.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com_chunk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com_chunk.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1511:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1512:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap >= boxhi[idim]) xremap -= prd[idim];
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1511:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1613:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1614:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap >= boxhi[jdim]) yremap -= prd[jdim];
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1613:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1746:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1747:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap >= boxhi[kdim]) zremap -= prd[kdim];
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1746:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                              ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_contact_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_contact_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:413:22: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  delta[idim] *= scale;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:263:59: warning: 'idim' may be used uninitialized in this function [-Wmaybe-uninitialized]
         maxvalue[idim] = force->numeric(FLERR,arg[iarg+3]);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:197:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"region") == 0) {
                        ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_coord_atom.cpp.o
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[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral.cpp
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[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dipole_chunk.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_erotate_sphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_erotate_sphere.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp:162:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp:161:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp:219:17: warning: 'pbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           pbuf[n] = 180.0*atan2(s,c)/MY_PI;
                 ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_erotate_sphere_atom.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_fragment_atom.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_global_atom.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_gyration.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_gyration.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_gyration.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_gyration_chunk.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_global_atom.cpp:521:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_global_atom.cpp:452:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_heat_flux.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_inertia_chunk.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_ke.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_ke_atom.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp:163:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp:162:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp:218:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           cbuf[n] = 180.0*acos(c)/MY_PI;
                 ^
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[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_property_atom.cpp.o
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[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_property_local.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp:205:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp:252:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_box.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/create_box.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_atoms.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_atoms.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp:657:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp:657:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp:229:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ranmol = new RanMars(lmp,molseed+comm->me);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp:119:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"basis") == 0) {
                        ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_bonds.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_bonds.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_bonds.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_bonds.cpp:103:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"special") == 0) {
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_bonds.cpp:122:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else if (style == SANGLE) {
          ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp:323:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp:332:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp:335:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_zero.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp: In member function 'void LAMMPS_NS::DisplaceAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp:128:5: warning: 'd_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (d_dim == 0) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp:146:5: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (coord_dim == 0) {
     ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_cfg.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_cfg.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_cfg.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp:857:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp:857:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp:477:20: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->v = vhold;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp:476:20: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->x = xhold;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp:478:28: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->image = imagehold;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp:758:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp:758:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_dcd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_dcd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_dcd.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:1028:20: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
      if (choose[i] && (*ptr == 0.0 && values[i] == 0.0) || 
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:1033:20: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
      if (choose[i] && (*ptr == 0.0 && value == 0.0) || 
                    ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_local.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_local.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_local.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_movie.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_movie.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:1033:66: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:1027:66: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:831:55: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
       image->draw_cylinder(pt1,pt2,color,ldiamvalue,3);
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:1036:72: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else image->draw_cylinder(x[atom1],x[atom2],color,diameter,3);
                                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:1034:16: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
   (*ptr != 0.0 && value != 0.0))
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:531:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *values;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:530:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *ptr,*ptrhold;
                  ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_xyz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_xyz.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/error.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/error.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/error.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp: In member function 'virtual int LAMMPS_NS::DumpImage::modify_param(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:1300:23: warning: 'factor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int n = 6 + factor*nentry;
                       ^
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix.cpp.o
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[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_adapt.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp: In member function 'void LAMMPS_NS::Finish::end(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp:768:33: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
     tmp = MAX(nneigh,nneighfull);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp:768:33: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_addforce.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_addforce.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_addforce.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_atom.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_chunk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_chunk.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_chunk.cpp:1058:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp:537:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp:828:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp:482:34: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     values[lastindex][i] = scalar;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp:499:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp: In constructor 'LAMMPS_NS::FixAveHisto::FixAveHisto(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp:233:10: warning: 'kindflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else if (kindflag != kind)
          ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_aveforce.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_aveforce.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:700:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:911:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_box_relax.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_box_relax.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:971:9: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (lengthone != nrows)
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:629:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else vector[i] += scalar;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp:291:67: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
                                                                   ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_controller.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_controller.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:411:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (value == -1)
         ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deprecated.cpp.o
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[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_drag.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_drag.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_drag.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_dt_reset.cpp.o
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[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_enforce2d.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp:188:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
         set[index].style = VARIABLE;
                  ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_external.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_halt.cpp: In member function 'virtual void LAMMPS_NS::FixHalt::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_halt.cpp:188:40: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'LAMMPS_NS::bigint {aka long long int}' [-Wformat=]
           id,update->ntimestep,attvalue);
                                        ^
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In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.cpp:17:0:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.h: In constructor 'LAMMPS_NS::FixNeighHistory::FixNeighHistory(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.h:76:12: warning: 'LAMMPS_NS::FixNeighHistory::valuepartner' will be initialized after [-Wreorder]
   double **valuepartner;        // values for the partners
            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.h:34:15: warning:   'LAMMPS_NS::Pair* LAMMPS_NS::FixNeighHistory::pair' [-Wreorder]
   class Pair *pair;             // ptr to pair style that uses neighbor history
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.cpp:36:1: warning:   when initialized here [-Wreorder]
 FixNeighHistory::FixNeighHistory(LAMMPS *lmp, int narg, char **arg) :
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp:847:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp:817:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp:787:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp: In constructor 'LAMMPS_NS::FixMove::FixMove(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp:176:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"units") == 0) {
                        ^
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nh_sphere.cpp.o
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[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nph.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nph.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nph.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nph_sphere.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_respa.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_restrain.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_setforce.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_recenter.cpp: In member function 'virtual void LAMMPS_NS::FixRecenter::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_recenter.cpp:182:41: warning: 'bboxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_recenter.cpp:182:53: warning: 'bboxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_spring.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_viscous.cpp
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_vector.cpp:149:26: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     extarray = finalvalue;
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_tmd.cpp: In member function 'void LAMMPS_NS::FixTMD::readfile(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_tmd.cpp:457:7: warning: 'imageflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (imageflag)
       ^
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_harmonic.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj1043.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj1043.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj126.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj126.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall.cpp:77:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj93.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj93.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj93.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_reflect.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_reflect.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_reflect.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_region.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_region.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_region.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/force.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/force.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/force.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_reflect.cpp:66:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp:724:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&ngroup,sizeof(int),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp:736:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp:740:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(names[i],sizeof(char),n,fp);
                                                     ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_group.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_group.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp:516:31: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
           tdir[2] = camDir[2] * t;
                               ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_neigh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_neigh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_neigh.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp: In member function 'void LAMMPS_NS::Group::assign(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp:295:12: warning: 'category' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else if (category == MOLECULE) tattribute = atom->molecule;
            ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_store.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_store.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_store.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_time.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_time.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_time.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_var.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_var.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_var.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/improper.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_zero.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_zero.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp:329:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp:332:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/info.cpp.o
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   for (int i = 0; i < styles.size(); ++i) {
                                   ^
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/input.cpp: In member function 'void LAMMPS_NS::Input::partition()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/input.cpp:1151:3: warning: 'yesflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (yesflag) {
   ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_special.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_special.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/math_special.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp: In function 'void lammps_create_atoms(void*, int, LAMMPS_NS::tagint*, int*, double*, double*, LAMMPS_NS::imageint*, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp:1068:76: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'LAMMPS_NS::bigint {aka long long int}' [-Wformat=]
               "invalid total atoms %ld %ld",lmp->atom->natoms,natoms_prev+n);
                                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp:1068:76: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'LAMMPS_NS::bigint {aka long long int}' [-Wformat=]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:260:52: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:260:39: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:260:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[3] = c_phi*p[3] + s_phi*kp[3];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[2] = c_phi*p[2] + s_phi*kp[2];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[1] = c_phi*p[1] + s_phi*kp[1];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[0] = c_phi*p[0] + s_phi*kp[0];
                            ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/memory.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/memory.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/memory.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/min.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/minimize.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/minimize.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/molecule.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/molecule.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/molecule.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin_standard.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin_standard.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin_standard.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1363:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1380:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1383:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1386:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1389:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1392:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1395:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1405:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1422:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1425:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1428:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1431:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp);
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1434:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_request.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_request.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_request.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_atomonly.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_atomonly.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp:104:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp:1675:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp:1783:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp:110:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp:108:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp:108:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp:111:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp:109:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp:109:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_atomonly_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_atomonly_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp:105:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp:103:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp:103:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp:104:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp:108:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp:106:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp:106:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp:116:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp:114:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp:114:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp:140:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp:115:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp:148:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp:146:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp:146:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp:123:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp:121:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp:106:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp:104:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp:104:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp:115:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp:127:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (includegroup && !(mask[j] & bitmask)) continue;
                                       ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp:123:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp:121:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp:121:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp:91:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:174:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:132:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:130:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:130:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:152:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:72:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:220:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:178:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:176:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:176:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:153:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:71:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:220:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:221:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:219:29: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ilist_middle[inum] = i;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:182:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:140:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:160:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:72:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:169:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:130:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:128:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:128:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:148:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:76:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:114:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp:39:13: warning: unused variable 'm' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp:39:17: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp:46:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:189:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:149:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:147:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:147:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:168:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:78:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:117:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp:38:13: warning: unused variable 'm' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp:38:17: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp:45:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp:39:13: warning: unused variable 'm' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp:39:17: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp:46:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp:39:11: warning: unused variable 'm' [-Wunused-variable]
   int i,j,m,n,nn,bitmask;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp:39:15: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,m,n,nn,bitmask;
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp:46:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp:80:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp:40:11: warning: unused variable 'm' [-Wunused-variable]
   int i,j,m,n,nn,itag,jtag,bitmask;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp:40:15: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,m,n,nn,itag,jtag,bitmask;
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp:82:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipSize::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:36:17: warning: unused variable 'm' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:36:21: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:36:45: warning: unused variable 'dnum' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:36:50: warning: unused variable 'dnumbytes' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:37:10: warning: unused variable 'jtag' [-Wunused-variable]
   tagint jtag;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:40:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:42:7: warning: unused variable 'nlocal' [-Wunused-variable]
   int nlocal = atom->nlocal;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp:152:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp:153:36: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:223:67: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (posix_memalign(&ptr, LAMMPS_MEMALIGN, pagesize*sizeof(T)))
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp:64:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipSizeOff2on::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp:37:17: warning: unused variable 'm' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp:37:21: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp:37:45: warning: unused variable 'dnum' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp:37:50: warning: unused variable 'dnumbytes' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                                                  ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_2d.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_2d.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipSizeOff2onOneside::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:40:17: warning: unused variable 'm' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,flip,dnum,dnumbytes,tmp;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:40:21: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,flip,dnum,dnumbytes,tmp;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:40:50: warning: unused variable 'dnum' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,flip,dnum,dnumbytes,tmp;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:40:55: warning: unused variable 'dnumbytes' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,flip,dnum,dnumbytes,tmp;
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:41:10: warning: unused variable 'jtag' [-Wunused-variable]
   tagint jtag;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:44:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_3d.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_3d.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_ghost_bin_2d.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_ghost_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_ghost_bin_2d.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_ghost_bin_3d.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:282:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:286:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&AA[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:287:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&BB[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:288:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&aa[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:289:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:290:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&beta[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:321:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:322:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:334:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:338:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:339:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:340:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:341:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:342:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:343:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:374:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:375:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:376:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:377:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:1656:5: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (rsq < cutsq[itype][jtype]) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:1667:32: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (atom->q) atom->q = q_hold;
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:408:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (msmflag) ftable[i] = qqrd2e/r * fgamma;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:395:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * egamma;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:399:30: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * derfc;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:409:61: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:409:56: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:372:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:373:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:374:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:375:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:407:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:410:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:411:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:168:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:164:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:165:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:169:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:164:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:489:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:490:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:484:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:485:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:484:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:369:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:370:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:371:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:373:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:374:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:406:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:407:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:408:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:410:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:312:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:316:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:317:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:318:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:348:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:349:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:350:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:351:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:487:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:488:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:482:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:483:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:482:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:171:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:168:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:172:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:373:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:374:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:406:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:409:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:467:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:467:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:249:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:252:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:276:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:277:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:146:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:146:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp:153:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp:154:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp:155:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp:156:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_streitz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_streitz.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:257:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:282:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:283:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:284:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:254:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:278:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:279:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:280:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:319:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:323:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:324:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:325:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:353:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:354:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:355:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:356:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:318:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:319:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:318:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:234:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:238:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:239:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:267:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_start,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:268:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_stop,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:269:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:270:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:271:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:285:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:289:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:290:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:318:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:319:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:320:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:668:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:685:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:688:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:694:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:698:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_lj[m],sizeof(double),4,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:701:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:705:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_coul[m],sizeof(double),4,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp:47:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:612:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:616:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:617:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:618:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:647:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:648:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:649:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:650:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:394:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:398:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:393:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:283:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:287:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:288:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:289:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:290:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:606:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:610:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:611:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:612:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:641:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:642:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:643:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:644:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:349:32: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:346:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:134:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:131:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:388:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:392:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:357:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:361:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:362:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:363:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:364:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:394:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:395:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:396:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:397:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:398:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:174:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:175:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:176:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:177:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:178:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:453:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:140:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:216:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:212:71: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:212:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:380:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:386:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:417:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:418:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:419:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:420:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:421:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:110:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:110:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:113:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:168:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:169:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:162:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:168:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:328:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:332:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:333:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:334:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:335:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:364:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:365:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:366:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:367:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:465:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:465:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:465:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:459:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:345:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:349:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:350:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:351:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:352:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:382:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:383:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:439:65: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:383:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:387:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:388:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:417:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:418:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:419:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:420:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:421:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:422:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:141:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:504:51: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:500:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:493:38: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tc*tc*tc * (coulsw3 + coulsw4*tc);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:160:58: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:170:59: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:166:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:166:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:356:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:360:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:361:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:362:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:363:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:393:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:394:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:395:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:396:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:454:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:453:60: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:449:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
                   ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:287:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:291:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:292:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:293:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:320:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:321:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:144:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:143:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:139:27: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
                           ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:633:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:637:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:638:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:639:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamR[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:640:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamA[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:641:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:672:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:673:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:674:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:675:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:269:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:273:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:274:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:275:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:276:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:304:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:305:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:306:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:396:46: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_mie*forcemie*r2inv;
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:400:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:250:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:254:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&prefactor[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:255:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:280:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp: In member function 'void LAMMPS_NS::PairTable::read_table(LAMMPS_NS::PairTable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:378:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:380:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:381:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:387:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:415:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:977:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:978:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:979:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewaldflag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:980:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&pppmflag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:981:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&msmflag,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:982:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dispersionflag,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:983:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tip4pflag,sizeof(int),1,fp);
                                       ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:1042:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:1042:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:1039:35: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phi = tb->e[itable] + fraction*tb->de[itable];
                                   ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:177:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:177:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:174:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:256:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:260:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:261:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:288:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:289:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:290:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:291:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp:176:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp:180:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp:205:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp:206:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&coeffflag,sizeof(int),1,fp);
                                       ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/python.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/python.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/python.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp:142:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
        (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp:290:45: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                             ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/random_mars.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/random_mars.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/random_park.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/random_park.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp:688:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[5] = kme + 1;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp:687:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[4] = jme + 1;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp:686:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[3] = ime + 1;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp:882:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return index;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp:557:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp:485:29: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else lo[dim] = valuehalf;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp: In member function 'void LAMMPS_NS::ReadData::parse_keyword(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp:1952:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if ((blank == strlen(line)) || (line[blank] == '#')) {
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp:1049:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::seek(LAMMPS_NS::bigint, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp:228:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::next(LAMMPS_NS::bigint, LAMMPS_NS::bigint, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp:298:5: warning: 'eofflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (eofflag) ntimestep = -1;
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp:270:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/reader.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_search(char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:628:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (strlen(&ep->d_name[nbegin]) < n) {
                                       ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_native.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_native.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:302:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:306:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:309:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:313:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:319:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:379:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:382:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:391:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:395:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:401:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:1027:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(all_written_send_sizes,sizeof(int),nprocs_file,fp);
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:1209:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(value,sizeof(char),n,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:1221:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(int),n,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:1232:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(double),n,fp);
                                              ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_xyz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_xyz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_xyz.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cone.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cone.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp:192:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delz = xorig[2] - zs;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp:191:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].dely = xorig[1] - ys;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp:190:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delx = xorig[0] - xs;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp:336:28: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   add_contact(0,x,xp,yp,zp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp:336:28: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp:336:28: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_intersect.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_intersect.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_plane.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_plane.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp:655:30: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     add_contact(0,x,xp,yp,zp);
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp:655:30: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp:655:30: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_prism.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/run.cpp:173:41: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (stopflag) update->endstep = stop;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/run.cpp:171:45: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (startflag) update->beginstep = start;
                                             ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/special.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/special.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/special.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/thermo.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/thermo.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/thermo.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/timer.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/timer.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/timer.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp: In member function 'void LAMMPS_NS::Set::set(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp:844:35: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
       quat[1] = xvalue * sintheta2;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp:1030:24: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
           quat[1] = 0.0;
                        ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::add_world(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp:190:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         } else if (strlen(str) == len-1) {
                                       ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/update.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/update.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/update.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp:149:38: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
   MPI_Comm_split(uorig,0,key,&uworld);
                                      ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:671:33: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
       fscanf(fp,"%d",&nextindex);
                                 ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/verlet.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/verlet.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:547:63: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(zvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:542:63: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(yvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:537:63: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(xvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:460:17: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vz *= zscale;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:456:17: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vy *= yscale;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:452:17: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vx *= xscale;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::ramp(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:650:3: warning: 'v_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (v_dim == 2 && domain->dimension == 2)
   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:672:3: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (coord_dim == 0) {
   ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:34:0:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/memory.h:172:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sfree(array[0]);
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:168:12: note: 'vhold' was declared here
   double **vhold;
            ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_data.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/write_data.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3882:39: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else argstack[nargstack++] = value;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp: In member function 'void LAMMPS_NS::WriteCoeff::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp:97:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(str,256,one);  // coeff
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp:101:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(str,256,one);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp:104:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(str,256,one);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:4631:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious,flag1,flag2;
       ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_restart.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/write_restart.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp: In member function 'void LAMMPS_NS::WriteDump::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp:84:16: warning: 'dump' may be used uninitialized in this function [-Wmaybe-uninitialized]
   dump->write();
                ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3955:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int index,nvec,nstride;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:4127:52: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (nvec > 1) xvalue = (double) i / (nvec-1);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:4140:5: warning: 'method' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (method == SLOPE) {
     ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_temp_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_temp_asphere.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:1170:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp:139:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertia[0] = tbonus[tri[i]].inertia[0];
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp:130:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         length = lbonus[line[i]].length;
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp:109:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nh_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nh_asphere.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nph_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nph_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nph_asphere.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_npt_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_npt_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_npt_asphere.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:950:11: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *vstore;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3638:38: warning: 'newtree' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (tree) newtree->type = CWIGGLE;
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3644:37: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       double value = value1 + value2*(1.0-cos(omega*delta*update->dt));
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3347:42: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       argstack[nargstack++] = sqrt(value1);
                                          ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere_noforce.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere_noforce.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere_noforce.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::set(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:185:9: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int nfirst,nlast;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:206:22: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
     num[nvar] = nlast;
                      ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_line.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_line.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_line.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_tri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere_noforce.cpp:94:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = bonus[ellipsoid[i]].shape;
                                 ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nvt_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nvt_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nvt_asphere.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:467:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:470:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:474:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:478:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:479:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:480:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:512:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamma,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:513:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&upsilon,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:514:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:515:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:516:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:517:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:445:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:448:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:452:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:456:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:457:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:458:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:486:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:487:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:730:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:729:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:728:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:730:21: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:729:21: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:728:21: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:730:51: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:729:51: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:728:51: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp:308:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:220:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/body_nparticle.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/body_nparticle.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp:382:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_body_local.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_body_local.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_temp_body.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_nh_body.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:195:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_nvt_body.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_nvt_body.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_nvt_body.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/pair_body.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/pair_body.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/pair_body.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:376:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:377:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:378:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:379:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:381:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:382:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:383:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:385:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:386:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:387:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:388:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp:187:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp:188:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp:189:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp:190:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/pair_body.cpp: In member function 'virtual void LAMMPS_NS::PairBody::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/pair_body.cpp:328:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:840:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:841:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:842:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:843:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:844:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:845:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:847:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:848:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:849:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:850:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:852:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:853:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:854:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:855:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:857:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:858:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:859:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:860:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:862:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:863:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:864:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:865:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:867:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:868:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:869:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:870:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:872:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:873:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:874:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:876:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:877:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:878:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:609:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:610:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:612:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:613:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:614:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:615:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:616:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:617:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:314:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:315:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:316:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:345:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:346:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:347:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:348:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:364:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:368:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:369:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:401:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:402:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:462:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:462:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:825:58: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
                                                          ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/fix_wall_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/fix_wall_colloid.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:405:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:409:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:410:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:411:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:442:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:445:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:446:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:447:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:448:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:537:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:537:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:530:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:530:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:533:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:528:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:610:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:614:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:615:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:650:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:651:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:652:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:653:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:654:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:655:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_target, sizeof(double),1,fp);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:656:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed, sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:657:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:658:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:659:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:660:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:176:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:181:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:184:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:184:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:178:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp:296:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp:245:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:309:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:241:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:401:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:405:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a12[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:406:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:407:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:408:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:409:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:439:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:440:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:441:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU_poly.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU_poly.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:544:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return factor_lj*phi;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:195:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:694:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:698:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:699:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:732:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:733:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:734:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:735:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:736:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:737:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:738:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:739:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:740:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1917:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1921:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1922:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1954:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1955:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1956:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1957:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1958:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1959:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1960:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1961:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate_poly.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate_poly.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_yukawa_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_yukawa_colloid.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_atom_gz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_atom_gz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_atom_gz.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_cfg_gz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_cfg_gz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_cfg_gz.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_custom_gz.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_xyz_gz.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/compute_temp_cs.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:148:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:144:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:145:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:149:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:144:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:189:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:181:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:186:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:190:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:183:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:183:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp:150:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp:147:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp:151:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_wolf_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_wolf_cs.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:187:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:179:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:184:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:187:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:181:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:181:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp:169:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp:174:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp:171:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp:171:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/atom_vec_dipole.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/atom_vec_dipole.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:542:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:518:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:542:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:542:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:548:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:545:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:184:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:189:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:193:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:186:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:186:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:441:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:448:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:480:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:496:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:500:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:501:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:502:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:531:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:532:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:533:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:238:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:245:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:303:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:355:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:356:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:357:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:387:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:388:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:389:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:390:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_freeze.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_freeze.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran_region.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran_region.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::bonded_history(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp:797:56: warning: variable 'vrlmaginv' set but not used [-Wunused-but-set-variable]
   double relrot1,relrot2,relrot3,vrl1,vrl2,vrl3,vrlmag,vrlmaginv;
                                                        ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hertz_history.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hertz_history.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp:677:42: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ninserted_mols = ninserted_atoms / natom;
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp:693:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp:651:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
                                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp:500:30: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
         coords[0][3] = radtmp;
                              ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald_disp.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald_disp.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:540:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:566:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kn,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:567:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kt,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamman,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:569:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gammat,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:570:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&xmu,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:571:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dampflag,sizeof(int),1,fp);
                                      ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable]
   int i,total,length,offset,num;
                      ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d_wrap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d_wrap.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fix_tune_kspace.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fix_tune_kspace.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fix_tune_kspace.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/gridcomm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/gridcomm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/gridcomm.cpp
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm_cg.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm_cg.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:427:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:431:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:432:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:433:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:434:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:435:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:436:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:470:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:471:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:472:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:473:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:474:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:475:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:568:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:569:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:561:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:561:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:564:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:559:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:191:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:183:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:192:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:189:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:186:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:185:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:190:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:248:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:249:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:244:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:243:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:404:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:409:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:410:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:411:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:443:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:446:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:447:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:448:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:449:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:539:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:539:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:532:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:532:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:535:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:530:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:184:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:176:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:181:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:184:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:178:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:360:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_a_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_rho_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:366:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_c_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:367:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_buck_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:399:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_buck_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:400:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:401:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:402:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:403:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:404:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:405:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:185:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:182:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:181:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:185:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:243:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:243:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:239:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:238:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1640:47: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1639:47: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1638:47: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1637:47: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1636:47: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1635:47: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:297:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:300:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:326:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:327:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:328:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:329:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:330:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:377:29: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:379:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:379:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:377:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:161:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:166:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:163:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:163:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1995:50: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1994:50: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1993:50: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1992:50: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1991:50: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1990:50: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:152:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:147:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:149:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:149:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:207:31: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:209:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:209:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:207:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:830:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:834:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:835:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:836:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:837:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:871:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:872:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:873:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:874:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:875:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:900:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:904:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:905:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:906:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:907:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:939:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:940:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:941:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:942:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:943:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:944:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:945:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:387:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:415:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:387:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:421:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:418:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:974:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:969:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:521:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:555:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:552:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:524:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:516:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:516:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:519:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1053:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv + 
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1048:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1036:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1036:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1039:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1034:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:197:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:206:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:199:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:199:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:206:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:217:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:221:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:214:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:214:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:221:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:573:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:633:76: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcelj = r6inv * (lj1[itype][jtype]*r6inv - lj2[itype][jtype]);
                                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:590:27: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rinv = 1.0/r;
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:617:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:614:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:219:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:224:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:240:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv + 
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:238:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv - 
                                               ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:800:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:804:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:805:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:806:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:837:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:838:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:839:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:840:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:841:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:842:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:843:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:934:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:926:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:926:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:929:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:924:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:513:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:543:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:540:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:183:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:192:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:366:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:390:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:366:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:396:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:393:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:544:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:545:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:546:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:547:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:548:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:549:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:476:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:468:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:468:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:471:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:466:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:209:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:204:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:213:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:206:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:206:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:415:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:420:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:417:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:410:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:409:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:337:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:333:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:417:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:360:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:364:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:365:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:366:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:397:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:398:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:399:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:400:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:401:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:402:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:476:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:477:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:478:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:479:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:480:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1552:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1555:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1556:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1557:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1558:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1559:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1560:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:383:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:388:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:385:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:378:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:377:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:385:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:980:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:976:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:949:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:945:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_cg.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_cg.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:451:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:456:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:453:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:446:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:445:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:373:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:369:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:453:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:719:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:715:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:688:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:684:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1422:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1421:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1323:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1319:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp_tip4p.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp_tip4p.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp_tip4p.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_stagger.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_stagger.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_stagger.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_tip4p.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_tip4p.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_tip4p.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/remap.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/remap_wrap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/remap_wrap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/remap_wrap.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:564:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:565:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:566:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:567:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:592:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:616:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:928:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp:164:32: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp:164:26: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3384:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3390:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3392:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3394:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3396:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3398:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3400:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3402:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3404:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3406:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3408:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3410:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3412:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3414:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3416:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3418:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3420:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3422:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3424:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3426:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3428:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3430:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3432:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3434:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3436:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3438:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3440:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3442:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3444:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3446:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3448:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3450:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3452:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3454:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3456:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3458:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3460:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3462:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3464:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3466:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3468:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3470:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3472:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3474:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3476:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3481:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3483:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3485:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3487:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3489:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3491:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3493:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3495:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3497:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3499:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3501:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3503:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3505:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3507:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3509:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3511:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3513:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3515:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3517:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3519:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3521:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3526:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3528:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3530:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3532:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3534:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3536:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3538:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3540:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3542:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3549:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3550:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3551:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3555:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3559:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3562:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3565:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3569:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3572:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3579:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3580:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3581:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3583:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3587:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3591:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3595:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3602:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3603:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3604:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3606:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3611:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3615:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3620:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3628:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3629:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3630:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3631:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3636:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3640:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3645:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3653:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3654:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3655:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3657:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3662:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3666:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3672:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3681:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3682:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3683:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3685:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3690:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3694:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3700:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3709:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3710:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3711:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3713:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3718:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3722:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3728:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3737:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3738:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3739:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3741:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3746:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3750:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3756:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo_morse.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:629:57: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fp,file->nr,&file->z2r[i][j][1]);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:1243:64: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
                                                                ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4990:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for(j=0;j<strlen(s);j++) {
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5017:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for(j=0;j<strlen(s);j++) {
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4981:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4982:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4987:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5016:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5083:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5085:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5087:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5091:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5096:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5100:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5102:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5104:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5113:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5120:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5124:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5128:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5130:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5134:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5136:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5140:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5142:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5146:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5148:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5152:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5154:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5158:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5160:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5162:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5171:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5178:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5186:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5194:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5202:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5209:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5213:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5230:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:4024:49: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (j > 0) df[1] += c * ((double) j) * xn * yn1;
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:4064:46: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (k > 0) df[2] += c * kr * xn * yn * zn1;
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::piRCSpline(double, double, double, int, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3285:10: warning: 'piRC' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return piRC;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5221:5: warning: 'nws' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nws==3) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4967:13: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,k,n,m;
             ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::read_lib()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:330:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:331:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:342:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:354:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:362:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:370:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:379:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,maxlib,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:388:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:395:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,maxlib,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:408:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:426:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:435:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
              fgets(s,maxlib,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:450:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:468:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:477:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,maxlib,fp);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:492:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:510:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:519:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,maxlib,fp);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::FLJ(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:813:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair = dC*dwij / rij;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:857:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:852:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:852:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:857:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:828:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:824:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkjS / rikS;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:847:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:852:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:857:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:852:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:828:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:847:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:883:76: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
             v_tally4(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS);
                                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:883:76: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:2314:44: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
             {com6+=prefac_ij2*pcrossk*dfc_k;}
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp: In member function 'double LAMMPS_NS::PairBOP::sigmaBo(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:3753:52: warning: 'xtmp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                   ,ftmp[2],xtmp[0],xtmp[1],xtmp[2]);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:3753:52: warning: 'xtmp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:3753:52: warning: 'xtmp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1763:42: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1763:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1764:35: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1775:51: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1500:38: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
             bt_sg[nb_jk].temp=temp_jk;
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:3641:30: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
               else if(temp_kk==temp_ji&&setting==0) {
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:1799:48: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
      prady  += 1.0 *  btor[2] * bbtor * att_eng;
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:1798:48: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::direct(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, int, int, int, double, double, double, double, double, double, double, double, double&, double&, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:2804:20: warning: 'dcurlji' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1n += dcurlji*iq*(afbn-fafbnl)*esucon/r;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:2807:20: warning: 'dcurlij' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1j += dcurlij*jq*(afbj-fafbnl)*esucon/r;
                    ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp: In member function 'virtual void LAMMPS_NS::PairEAM::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp:470:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp:471:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp:473:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp: In member function 'void LAMMPS_NS::PairEAM::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp:788:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:143:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:168:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:194:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloy::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:143:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:168:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:192:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp:971:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp:975:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:205:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:210:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw_zbl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw_zbl.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_nb3b_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_nb3b_harmonic.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:986:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:992:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:993:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:994:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&gamma_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:995:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&A);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:996:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:997:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:998:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&alpha);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:999:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1000:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1001:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&d);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1002:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1003:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_4);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1004:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_6);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1005:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&L);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1006:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&kappa);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1007:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_0);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1008:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1009:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_0);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1010:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1_LR);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1011:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2_LR);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1012:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1013:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1015:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1016:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1017:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1018:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1019:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&delta);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1022:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1031:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1038:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; }
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1045:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1051:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_rebo.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_rebo.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:579:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:580:60: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     while (line == strchr(line,'#')) fgets(line,MAXLINE,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:596:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:614:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:650:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:881:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_sw.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_sw.cpp
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff.cpp
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff_mod.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:262:7: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (emb > epsilon) {
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:290:82: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
                                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:290:82: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:290:82: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_atom_swap.cpp: In member function 'int LAMMPS_NS::FixAtomSwap::attempt_semi_grand()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_atom_swap.cpp:391:54: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
         atom->v[i][0] *= sqrt_mass_ratio[itype][jtype];
                                                      ^
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_gcmc.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_tfmc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_tfmc.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:629:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jlast]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:607:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jprev]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:202:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:618:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (iangle = 0; iangle < num_angle[ilast]; iangle++) {
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:491:39: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (iprev >= 0) iprevtag = tag[iprev];
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:202:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:414:53: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jnextangletype,i,jnext,jlast) +
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:419:49: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jangletype,jprev,j,jnext) -
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:418:53: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(inextangletype,i,inext,ilast) -
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:413:56: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             delta += angle_eng(iangletype,iprev,i,jnext) +
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:457:37: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jbond = 0; jbond < num_bond[j]; jbond++)
                                     ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MEAM/pair_meam.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MEAM/pair_meam.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MEAM/pair_meam.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_msd_nongauss.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_msd_nongauss.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:350:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:354:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:355:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:383:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:384:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&max_cell_size,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:385:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:386:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:387:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_ti.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_ti.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:559:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (size >= num && num_of_bits < 32) {
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:600:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (bytes[num_of_bytes] >= num) {
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:654:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (num_of_bits >= num_of_bytes * 8) {
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:655:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes; i++) {
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:660:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes-1; i++) {
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:695:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (lastbits < num_of_bits) {
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:397:54: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define LASTIDX (sizeof(magicints) / sizeof(int) - 1 )
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:935:23: note: in expansion of macro 'LASTIDX'
     while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:46:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:939:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:46:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:1115:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_efield.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_efield.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:1141:54: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[2] = receivebits(buf, bitsizeint[2]);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:1140:54: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[1] = receivebits(buf, bitsizeint[1]);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:1139:54: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[0] = receivebits(buf, bitsizeint[0]);
                                                      ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_gld.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_gld.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp:530:56: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else atom->avec->create_atom(ntype+onemols[imol]->type[m],coords[m]);
                                                        ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_oneway.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_oneway.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_oneway.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp:324:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else if (me == proc && i == iatom) {
                               ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_orient_bcc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_orient_bcc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_orient_bcc.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_orient_fcc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_orient_fcc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_orient_fcc.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_thermal_conductivity.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_thermal_conductivity.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_thermal_conductivity.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_ttm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_ttm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_ttm.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_viscosity.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_viscosity.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_viscosity.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:329:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:333:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:334:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:335:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:336:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:337:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:367:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:368:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:369:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:370:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:381:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:385:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:386:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:387:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:388:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:389:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:390:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:422:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:423:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:424:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:425:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:426:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:486:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:151:58: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0n[itype][jtype]*rninv -
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:153:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0m[itype][jtype]*rminv) -
                                                          ^
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/xdr_compat.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/xdr_compat.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:427:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:431:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:432:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:433:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:434:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:435:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:468:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:469:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:470:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:471:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:472:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:473:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:474:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_delta.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_delta.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:560:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:560:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:563:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:558:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:570:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:187:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:192:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:197:50: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:198:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:189:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:189:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp:197:70: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp:249:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp:250:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp:251:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp:252:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp:250:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp:251:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b[1],sizeof(int),atom->nangletypes,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp:252:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp:215:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp:216:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp:215:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp:216:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:292:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:293:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp: In member function 'void LAMMPS_NS::AngleTable::read_table(LAMMPS_NS::AngleTable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:385:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:387:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:388:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:394:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:403:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:405:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_angle.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_bond.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_bond.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_bond.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_full.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_molecular.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_molecular.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_molecular.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_template.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_template.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp:220:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp:221:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp:222:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp:223:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:229:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:230:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:231:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:232:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:233:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp:172:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp:173:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp:172:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp:173:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp:176:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&d0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp:177:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp:178:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp:171:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp:172:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp:173:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&lamda[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:281:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:282:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:283:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:284:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&rc[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:285:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&u0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:236:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:237:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp: In member function 'void LAMMPS_NS::BondTable::read_table(LAMMPS_NS::BondTable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:314:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:316:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:317:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:323:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:335:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:429:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:430:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:431:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:432:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:433:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:472:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:473:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:474:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:475:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:476:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp:333:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp:334:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp:335:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp:325:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:320:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:323:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:324:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp:335:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp:336:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp:337:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp:338:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:339:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:340:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:341:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:209:15: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:208:18: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp:280:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp:281:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp:323:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp: In member function 'double LAMMPS_NS::FixCMAP::dihedral_angle_atan2(double, double, double, double, double, double, double, double, double, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp:958:10: warning: 'angle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return angle;
          ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:153:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:302:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingLJ::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:512:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:379:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:386:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:445:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:123:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:375:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:502:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingMorse::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:415:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:168:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:201:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:134:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:134:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/atom_vec_peri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/atom_vec_peri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:437:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&epsilon[i][j],sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&sigma[i][j],sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:443:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&eps14[i][j],sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:444:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&sigma14[i][j],sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:477:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:478:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:621:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:627:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:667:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:673:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:534:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv + 
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:529:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:196:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv + 
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:194:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv - 
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:480:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:507:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:508:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:509:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:510:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:511:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:513:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:338:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:337:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:265:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:261:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_damage_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_damage_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:378:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_plasticity_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_plasticity_atom.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/fix_peri_neigh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/fix_peri_neigh.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp:106:11: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *theta;
           ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:495:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:499:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:500:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:501:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:502:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:503:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:570:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:574:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:575:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:576:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:577:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:578:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:579:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_yieldstress[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:424:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:428:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kspring[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:429:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:430:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:431:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_dynamic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_dynamic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_dynamic.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_fire.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_fire.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_fire.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:552:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:556:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:557:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:558:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:559:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:560:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:561:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_lambdai[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:562:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_taubi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp: In member function 'virtual int LAMMPS_NS::FixQEq::pack_forward_comm(int, int*, double*, int, int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp:486:10: warning: 'm' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return m;
          ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_point.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_point.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_point.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_shielded.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_shielded.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_shielded.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_slater.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/fix_reax_bonds.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/compute_event_displace.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/compute_event_displace.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/compute_event_displace.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_event.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_event_prd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_event_prd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_event_prd.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp: In member function 'virtual void LAMMPS_NS::PairREAX::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp:177:30: warning: statement has no effect [-Wunused-value]
   FORTRAN(cbkabo, CBKABO).abo;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp: In member function 'void LAMMPS_NS::PairREAX::cg_solve(const int&, const int&, double*, int*, int*, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp:946:15: warning: variable 'zero' set but not used [-Wunused-but-set-variable]
   double one, zero, rho, rho_old, alpha, beta, gamma;
               ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_event_tad.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_event_tad.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_event_tad.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/neb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/neb.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/prd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/prd.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/tad.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/tad.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/tad.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/neb.cpp: In member function 'void LAMMPS_NS::NEB::run()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/neb.cpp:306:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (uscreen)
        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/neb.cpp:320:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (ulogfile)
        ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/temper.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/temper.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/temper.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp:612:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp:612:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp:612:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                                          ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/verlet_split.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_ehex.cpp:203:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
      fshake = ((FixShake*) modify->fix[id_shake]);
                                                ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh_small.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:579:51: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + me);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:396:30: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][2] = zflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:395:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:394:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:358:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (domain->dimension == 2 && zflag == 1.0)
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:364:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:363:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:224:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (custom_flag) delete [] molecule;
                                ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph_small.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt_small.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1442:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1437:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1421:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1365:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1364:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1364:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                  ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1587:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1574:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1536:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x1 = x[i][1] + ybox*yprd + zbox*yz;
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1535:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1535:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2183:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve_small.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2256:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt_small.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2082:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (infile && inbody[ibody]) continue;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2063:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1980:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2045:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_shake.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_shake.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_shake.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_append_atoms.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_append_atoms.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_append_atoms.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_msst.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_msst.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_nphug.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_nphug.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2665:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (me == 0) fclose(fp);
                          ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_wall_piston.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1327:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1322:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1307:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1465:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1452:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2385:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_sna_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_sna_atom.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snad_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snad_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:492:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + comm->me);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2471:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snav_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snav_atom.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2269:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (infile && inbody[ibody]) continue;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2247:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2162:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2229:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/sna.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/sna.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp:67:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp: In member function 'void LAMMPS_NS::PairSNAP::compute_optimized(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp:724:53: warning: 'endtime' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (time_guided) schedule_time_guided = endtime - starttime;
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp:477:9: warning: 'ielem' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int ielem;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp:724:53: warning: 'starttime' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (time_guided) schedule_time_guided = endtime - starttime;
                                                     ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp:91:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp:108:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2968:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       c1 = tbonus[tri[i]].c1;
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2956:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       length = lbonus[line[i]].length;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2940:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:3051:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       inertia = tbonus[tri[i]].inertia;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:3038:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       biglist[k].theta = lbonus[line[i]].theta;
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:3026:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/pair_python.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/pair_python.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1019:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:146:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_init, NULL);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:164:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:182:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate, NULL);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:200:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:219:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:237:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_reset_dt, NULL);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2685:37: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *c1 = tbonus[tri[i]].c1;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2705:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double length = lbonus[line[i]].length;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2702:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *shape = ebonus[ellipsoid[i]].shape;
                                              ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_atom_mpiio.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_atom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_atom_mpiio.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp:410:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   else if (format && strlen(format) != ninput+noutput)
                                               ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_cfg_mpiio.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_cfg_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_cfg_mpiio.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1550:33: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[2] = xbcollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1549:33: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[1] = xbcollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1548:33: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[0] = xbcollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1547:33: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[2] = xscollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1546:33: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[1] = xscollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1545:33: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[0] = xscollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1553:29: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[2] = normfirst[2];
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1552:29: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[1] = normfirst[1];
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1551:29: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[0] = normfirst[0];
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1578:32: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (collidestyle == SLIP && type == SPHERE)
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1583:33: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
         force_wall(v[i],vsnew,j);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp:320:36: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     PyTuple_SetItem(pArgs,i,pValue);
                                    ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_custom_mpiio.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_custom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_custom_mpiio.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_xyz_mpiio.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_xyz_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/dump_xyz_mpiio.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/restart_mpiio.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/restart_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MPIIO/restart_mpiio.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/fix_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/fix_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/fix_gpu.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pppm_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pppm_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pppm_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp:515:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for (j=0; j<narea.size(); ++j)
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp:530:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp:547:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         for( j=0; j<vlist.size(); j+=vlist[j]+1 ) {
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp:591:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp:240:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp:242:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp:282:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp:279:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp:279:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp:283:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_debye_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_dsf_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp:250:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp:250:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_tstat_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_tstat_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_tstat_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp:406:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp:231:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp:234:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp:231:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:249:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:253:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:253:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:256:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:284:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:270:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp:239:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp:236:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp:242:74: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp:222:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp:233:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp:225:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp:334:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp:334:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp:331:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp:339:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp:233:59: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp:335:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp:338:63: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       -r12[0],-r12[1],-r12[2]);
                                                               ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp:310:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp:313:73: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       fforce[2],-r12[0],-r12[1],-r12[2]);
                                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp:223:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:274:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:277:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp:302:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp:298:36: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (eflag) evdwl *= factor_lj;
                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:355:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:355:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:360:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp:283:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp:284:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp:288:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp:287:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongGPU::init_style()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:151:16: warning: unused variable 'cut' [-Wunused-variable]
         double cut = init_one(i,j);
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongGPU::init_style()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:154:10: warning: variable 'cut' set but not used [-Wunused-but-set-variable]
   double cut;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp:275:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp:276:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp:280:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp:280:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:282:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:287:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:284:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:284:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:324:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:328:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:321:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:321:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:328:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:306:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:311:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:315:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:308:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:380:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:405:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:425:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_sw_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:380:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:405:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:427:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:432:55: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (me == 0) grab(fptr,file->nr,&file->rhor[i][1]);
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:443:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_mod_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_mod_gpu.cpp
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_zbl_gpu.cpp
[100%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/usr/include/mpich-arm -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MPIIO -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/mpich/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairVashishtaGPU::init_style()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp:154:24: warning: unused variable 'r0eps' [-Wunused-variable]
   double *cutsq, *r0, *r0eps, *gamma, *eta;
                        ^
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+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 18790 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' mpi/mpich-arm = '' ']'
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module unload mpi/mpich-arm
++ /usr/bin/modulecmd sh unload mpi/mpich-arm
+ eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;'
++ MANPATH=/usr/share/man:/usr/local/share/man
++ export MANPATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PKG_CONFIG_PATH=/usr/lib/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset LD_LIBRARY_PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset PYTHONPATH
++ unset _LMFILES_
+ cd ..
+ cd serial
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro '
+ export LDFLAGS
+ /usr/bin/cmake3 -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DBUILD_SHARED_LIBS:BOOL=ON -DENABLE_ALL=ON -DLAMMPS_XDR=ON -DENABLE_PYTHON=ON -DENABLE_VORONOI=ON -DENABLE_TESTING=ON -DPYTHON_INSTDIR=/usr/lib/python3.4/site-packages -DENABLE_GPU=ON -DGPU_API=OpenCL -DFFT=FFTW3 -DENABLE_MPI=OFF ../cmake
-- The C compiler identification is GNU 4.8.5
-- The CXX compiler identification is GNU 4.8.5
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- The Fortran compiler identification is GNU 4.8.5
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Performing Test FC_HAS_NO_SECOND_UNDERSCORE
-- Performing Test FC_HAS_NO_SECOND_UNDERSCORE - Success
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.27.1") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.3
-- Found FFTW3: /usr/lib/libfftw3.so  
-- Found PythonInterp: /usr/bin/python (found version "2.7.5") 
-- Found PythonLibs: /usr/lib/libpython3.4m.so (found version "3.4.5") 
-- Found JPEG: /usr/lib/libjpeg.so  
-- Found ZLIB: /usr/lib/libz.so (found version "1.2.7") 
-- Found PNG: /usr/lib/libpng.so (found version "1.5.13") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing:  FFMPEG_EXECUTABLE) 
-- Found VORO: /usr/lib/libvoro++.so  
-- Looking for math.h
-- Looking for math.h - found
-- Looking for sin in m
-- Looking for sin in m - found
-- Looking for cos in m
-- Looking for cos in m - found
-- Looking for CL_VERSION_2_0
-- Looking for CL_VERSION_2_0 - found
-- Found OpenCL: /usr/lib/libOpenCL.so (found version "2.0") 
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/atom_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/beck_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/born_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/born_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/born_coul_wolf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/buck_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/buck_coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/buck_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/charmm_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/colloid_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/coul_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/device_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/dipole_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/dipole_lj_sf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/dpd_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/eam_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/ellipsoid_nbor_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/gauss_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj96_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj_class2_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj_coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj_coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj_coul_msm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj_cubic_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj_expand_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj_gromacs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj_sdk_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/lj_sdk_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/mie_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/morse_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/neighbor_cpu_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/neighbor_gpu_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/pppm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/re_squared_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/re_squared_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/soft_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/sw_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/table_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/tersoff_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/tersoff_mod_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/tersoff_zbl_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/vashishta_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/yukawa_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/yukawa_colloid_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/zbl_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/gayberne_cl.h...
Creating /builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu/gayberne_lj_cl.h...
-- Generating style_angle.h...
-- Generating style_atom.h...
-- Generating style_body.h...
-- Generating style_bond.h...
-- Generating style_command.h...
-- Generating style_compute.h...
-- Generating style_dihedral.h...
-- Generating style_dump.h...
-- Generating style_fix.h...
-- Generating style_improper.h...
-- Generating style_integrate.h...
-- Generating style_kspace.h...
-- Generating style_minimize.h...
-- Generating style_nbin.h...
-- Generating style_npair.h...
-- Generating style_nstencil.h...
-- Generating style_ntopo.h...
-- Generating style_pair.h...
-- Generating style_reader.h...
-- Generating style_region.h...
-- Building package: ASPHERE
-- Building package: BODY
-- Building package: CLASS2
-- Building package: COLLOID
-- Building package: COMPRESS
-- Building package: CORESHELL
-- Building package: DIPOLE
-- Building package: GRANULAR
-- Building package: KSPACE
-- Building package: MANYBODY
-- Building package: MC
-- Building package: MEAM
-- Building package: MISC
-- Building package: MOLECULE
-- Building package: PERI
-- Building package: QEQ
-- Building package: REAX
-- Building package: REPLICA
-- Building package: RIGID
-- Building package: SHOCK
-- Building package: SNAP
-- Building package: SRD
-- Building package: PYTHON
-- Building package: VORONOI
-- Building package: GPU
-- <<< Build configuration >>>
   Build type       
   Install path     /usr
   Compilers and Flags:
   C++ Compiler     /usr/bin/c++
       Type         GNU
   C++ Flags        -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  
-- Fortran Compiler /usr/bin/gfortran 
           Type     GNU
   Fortran Flags    -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  
-- Linker flags:
   Executable       -Wl,-z,relro 
-- Shared libries   -Wl,-z,relro 
-- Link libraries: mpi_stubs;/usr/lib/libfftw3.so;/usr/lib/libpython3.4m.so;/usr/lib/libjpeg.so;/usr/lib/libpng.so;/usr/lib/libz.so;/usr/lib/libz.so;/usr/lib/libvoro++.so;m;reax;meam;gpu
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/lammps-patch_17Jan2018/serial
+ /usr/bin/make -j4
/usr/bin/cmake3 -H/builddir/build/BUILD/lammps-patch_17Jan2018/cmake -B/builddir/build/BUILD/lammps-patch_17Jan2018/serial --check-build-system CMakeFiles/Makefile.cmake 0
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/usr/bin/cc  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/STUBS/mpi.c.o   -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/STUBS/mpi.c
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      character*2 qaset,qadd                                            
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      character*25 qfile                                                
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      character*20 qkeyw                                                
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      character*25 qfile                                                
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      character*20 qkeyw                                                
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     $       na_local                                                   
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      character*2 qaset,qadd                                            
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      character*25 qfile                                                
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      character*20 qkeyw                                                
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      character*25 qfile                                                
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      character*20 qkeyw                                                
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                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:94.48:
      dimension nmolo2(nat),iseen(nmolmax),isee2(nmolmax)               
                                                1
Warning: Unused variable 'isee2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:94.33:
      dimension nmolo2(nat),iseen(nmolmax),isee2(nmolmax)               
                                 1
Warning: Unused variable 'iseen' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:94.22:
      dimension nmolo2(nat),iseen(nmolmax),isee2(nmolmax)               
                      1
Warning: Unused variable 'nmolo2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:87:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:193:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:989.17:
      dimension a(3),b(3),j(3)                                          
                 1
Warning: Unused variable 'a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:989.22:
      dimension a(3),b(3),j(3)                                          
                      1
Warning: Unused variable 'b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:989.27:
      dimension a(3),b(3),j(3)                                          
                           1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:979:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1228:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1352:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1421:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
[  0%] Linking C static library libmpi_stubs.a
/usr/bin/cmake3 -P CMakeFiles/mpi_stubs.dir/cmake_clean_target.cmake
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/mpi_stubs.dir/link.txt --verbose=1
/usr/bin/ar qc libmpi_stubs.a  CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/STUBS/mpi.c.o
/usr/bin/ranlib libmpi_stubs.a
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
[  0%] Built target mpi_stubs
[  0%] Building Fortran object CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/small.blk:3.7:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:308:
     $       na_local                                                   
       1
Warning: Nonconforming tab character at (1)
[  0%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:224.14:
      real*8 G,Gbar,gam,shp(3)                                          
              1
Warning: Unused variable 'g' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:224.23:
      real*8 G,Gbar,gam,shp(3)                                          
                       1
Warning: Unused variable 'gam' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:224.19:
      real*8 G,Gbar,gam,shp(3)                                          
                   1
Warning: Unused variable 'gbar' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:224.30:
      real*8 G,Gbar,gam,shp(3)                                          
                              1
Warning: Unused variable 'shp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:89.19:
      real*8 coef1a,coef1b,coef2a,coef2b                                
                   1
Warning: Unused variable 'coef1a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:89.26:
      real*8 coef1a,coef1b,coef2a,coef2b                                
                          1
Warning: Unused variable 'coef1b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:89.33:
      real*8 coef1a,coef1b,coef2a,coef2b                                
                                 1
Warning: Unused variable 'coef2a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:89.40:
      real*8 coef1a,coef1b,coef2a,coef2b                                
                                        1
Warning: Unused variable 'coef2b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:91.17:
      real*8 dC1a,dC1b,dC2a,dC2b                                        
                 1
Warning: Unused variable 'dc1a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:91.22:
      real*8 dC1a,dC1b,dC2a,dC2b                                        
                      1
Warning: Unused variable 'dc1b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:91.27:
      real*8 dC1a,dC1b,dC2a,dC2b                                        
                           1
Warning: Unused variable 'dc2a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:91.32:
      real*8 dC1a,dC1b,dC2a,dC2b                                        
                                1
Warning: Unused variable 'dc2b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:88.34:
      real*8 Cmin,Cmax,delc,ebound,rbound,a,coef1,coef2                 
                                  1
Warning: Unused variable 'ebound' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:85.60:
      real*8 xjtmp,yjtmp,zjtmp,delxik,delyik,delzik,rik2,rik            
                                                            1
Warning: Unused variable 'rik' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:86.60:
      real*8 xktmp,yktmp,zktmp,delxjk,delyjk,delzjk,rjk2,rjk            
                                                            1
Warning: Unused variable 'rjk' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:348.54:
      real*8 riksq,rjksq,xik,xjk,cikj,a,delc,sikj,fcij,rij              
                                                      1
Warning: Unused variable 'fcij' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:337.29:
      integer i,j,nmax,k,nk,m                                           
                             1
Warning: Unused variable 'm' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:348.58:
      real*8 riksq,rjksq,xik,xjk,cikj,a,delc,sikj,fcij,rij              
                                                          1
Warning: Unused variable 'rij' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:35.15:
      integer j,jn                                                      
               1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_dens_init.F:35.18:
      integer j,jn                                                      
                  1
Warning: Unused variable 'jn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:732.5:
 3500 format ('END')                                                    
     1
Warning: Label 3500 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:731.5:
 3400 format ('ENERGY',5x,f14.6)                                        
     1
Warning: Label 3400 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:730.5:
 3300 format ('UNIT ENERGY   kcal')                                     
     1
Warning: Label 3300 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:729.5:
 3200 format ('CONECT',12i6)                                            
     1
Warning: Label 3200 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:728.5:
 3100 format ('FORMAT CONECT (a6,12i6)')                                
     1
Warning: Label 3100 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:726.5:
 3000 format ('HETATM',1x,i5,1x,a5,1x,a3,1x,a1,1x,a5,3f10.5,1x,         
     1
Warning: Label 3000 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:724.5:
 2900 format ('FORMAT ATOM   (a6,1x,i5,1x,a5,1x,a3,1x,a1,1x,a5,',       
     1
Warning: Label 2900 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:723.5:
 2800 format ('TORSION RESTRAINT ',4i4,2f8.2,f8.4,f9.6)                 
     1
Warning: Label 2800 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:721.5:
 2700 format ('#                 At1 At2 At3 At3 Angle   Force1  ',     
     1
Warning: Label 2700 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:720.5:
 2600 format ('ANGLE RESTRAINT ',3i4,2f8.2,f8.4,f9.6)                   
     1
Warning: Label 2600 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:718.5:
 2500 format ('#               At1 At2 At3 Angle   Force1  Force2',     
     1
Warning: Label 2500 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:717.5:
 2400 format ('BOND RESTRAINT ',2i4,f8.4,f8.2,f8.5,f10.7)               
     1
Warning: Label 2400 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:715.5:
 2300 format ('#              At1 At2   R12    Force1  Force2  ',       
     1
Warning: Label 2300 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:714.5:
 2200 format ('CELLS ',6i5)                                             
     1
Warning: Label 2200 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:713.5:
 2100 format ('CRYSTX ',6f11.5)                                         
     1
Warning: Label 2100 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:712.5:
 2000 format ('RUTYPE ',a40)                                            
     1
Warning: Label 2000 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:711.5:
 1900 format ('FFIELD ',a40)                                            
     1
Warning: Label 1900 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:710.5:
 1800 format ('REMARK ',a60)                                            
     1
Warning: Label 1800 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:709.5:
 1700 format ('DESCRP ',a60)                                            
     1
Warning: Label 1700 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:708.5:
 1600 format ('XTLGRF',i4)                                              
     1
Warning: Label 1600 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:707.5:
 1500 format ('BIOGRF',i4)                                              
     1
Warning: Label 1500 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:702.5:
 1100 format (8i3,8f8.4)                                                
     1
Warning: Label 1100 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:689.5:
  320 format (3f10.4)                                                   
     1
Warning: Label 320 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:688.5:
  310 format (2x,a1,1x,a60)                                             
     1
Warning: Label 310 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:687.5:
  302 format (2x,a1,1x,2f6.2,a60)                                       
     1
Warning: Label 302 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:686.5:
  301 format (2x,a1,1x,f6.2,a60)                                        
     1
Warning: Label 301 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3297.5:
 2200 format ('CELLS ',6i5)                                             
     1
Warning: Label 2200 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3284.5:
 1900 format ('FFIELD ',a40)                                            
     1
Warning: Label 1900 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1019.5:
 1070 format (f7.5)                                                     
     1
Warning: Label 1070 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1018.5:
 1060 format (i8)                                                       
     1
Warning: Label 1060 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1017.5:
 1056 format (f9.4)                                                     
     1
Warning: Label 1056 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1016.5:
 1055 format (f7.4)                                                     
     1
Warning: Label 1055 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1015.5:
 1050 format (f7.3)                                                     
     1
Warning: Label 1050 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1007.5:
   30 continue                                                          
     1
Warning: Label 30 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:861.20:
      ishock_type = 0.0d0 ! shock type. 0: simple impact; 1: compressing
                    1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1074.5:
   12 C(1,1)=ZERO                                                       
     1
Warning: Label 12 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1540.72:
      qfile(nprob)=qmol                                                 
                                                                        1
Warning: CHARACTER expression will be truncated in assignment (25/60) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2777.72:
      qvtype(nvrc,i1)=qstrana2                                          
                                                                        1
Warning: CHARACTER expression will be truncated in assignment (5/40) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2857.72:
      qetype(nerc,i1)=qstrana2                                          
                                                                        1
Warning: CHARACTER expression will be truncated in assignment (5/40) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3867.5:
  400 format (8i3,8f8.4)                                                
     1
Warning: Label 400 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3633:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2546:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1869:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1893.25:
      character*25 qfileh                                               
                         1
Warning: Unused variable 'qfileh' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1869:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1869:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1890.22:
      character*2 qrom                                                  
                      1
Warning: Unused variable 'qrom' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1869:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1589:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1028:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3136:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3154.20:
      character*2 qt                                                    
                    1
Warning: Unused variable 'qt' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3422:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3077:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:22:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:285.27:
      subroutine mdsav(node)                                            
                           1
Warning: Unused dummy argument 'node' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:309.49:
      dimension idum(mbond+3),bodum(mbond+3),qat2(2)                    
                                                 1
Warning: Unused variable 'qat2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:312.22:
      character*4 qext                                                  
                      1
Warning: Unused variable 'qext' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:289:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:753.24:
      character*20 qhulp                                                
                        1
Warning: Unused variable 'qhulp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:752.24:
      character*6 qident                                                
                        1
Warning: Unused variable 'qident' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:742:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1165:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1302:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1448:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2618:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
Scanning dependencies of target gpu
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2718:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2801:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:2877:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3328.44:
     $sumtt,tmax,eaver,eav2,eav3,etot2,ediff)                           
                                            1
Warning: Unused dummy argument 'ediff' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3328.38:
     $sumtt,tmax,eaver,eav2,eav3,etot2,ediff)                           
                                      1
Warning: Unused dummy argument 'etot2' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3331:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3328.11:
     $sumtt,tmax,eaver,eav2,eav3,etot2,ediff)                           
           1
Warning: Unused dummy argument 'sumtt' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3691:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3787:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
[  0%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp
[  0%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:122.19:
              kk = pp                                                   
                   1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:61.38:
      real*8 B,r,recip,phi,phip,rhop,a                                  
                                      1
Warning: Unused variable 'a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:63.15:
      real*8 a0,a1,a1i,a1j,a2,a2i,a2j                                   
               1
Warning: Unused variable 'a0' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:64.25:
      real*8 a3i,a3j,a3i1,a3i2,a3j1,a3j2                                
                         1
Warning: Unused variable 'a3i1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:64.30:
      real*8 a3i,a3j,a3i1,a3i2,a3j1,a3j2                                
                              1
Warning: Unused variable 'a3i2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:64.35:
      real*8 a3i,a3j,a3i1,a3i2,a3j1,a3j2                                
                                   1
Warning: Unused variable 'a3j1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:64.40:
      real*8 a3i,a3j,a3i1,a3i2,a3j1,a3j2                                
                                        1
Warning: Unused variable 'a3j2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:82.21:
      real*8 arg,arg1,arg2                                              
                     1
Warning: Unused variable 'arg1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:82.26:
      real*8 arg,arg1,arg2                                              
                          1
Warning: Unused variable 'arg2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:83.47:
      real*8 arg1i1,arg1j1,arg1i2,arg1j2,arg2i2,arg2j2                  
                                               1
Warning: Unused variable 'arg2i2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:84.33:
      real*8 arg1i3,arg1j3,arg2i3,arg2j3,arg3i3,arg3j3                  
                                 1
Warning: Unused variable 'arg2i3' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:83.54:
      real*8 arg1i1,arg1j1,arg1i2,arg1j2,arg2i2,arg2j2                  
                                                      1
Warning: Unused variable 'arg2j2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:84.40:
      real*8 arg1i3,arg1j3,arg2i3,arg2j3,arg3i3,arg3j3                  
                                        1
Warning: Unused variable 'arg2j3' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:59.21:
      real*8 Eu,astar,astarp,third,sixth                                
                     1
Warning: Unused variable 'astar' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:59.28:
      real*8 Eu,astar,astarp,third,sixth                                
                            1
Warning: Unused variable 'astarp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:61.14:
      real*8 B,r,recip,phi,phip,rhop,a                                  
              1
Warning: Unused variable 'b' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:67.15:
      real*8 b0,rhoa0j,drhoa0j,rhoa0i,drhoa0i                           
               1
Warning: Unused variable 'b0' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:68.15:
      real*8 b1,rhoa1j,drhoa1j,rhoa1i,drhoa1i                           
               1
Warning: Unused variable 'b1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:69.15:
      real*8 b2,rhoa2j,drhoa2j,rhoa2i,drhoa2i                           
               1
Warning: Unused variable 'b2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:70.22:
      real*8 a3,a3a,b3,rhoa3j,drhoa3j,rhoa3i,drhoa3i                    
                      1
Warning: Unused variable 'b3' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:57.49:
      real*8 xitmp,yitmp,zitmp,delij(3),delref(3),rij2,rij,rij3         
                                                 1
Warning: Unused variable 'delref' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.56:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                                                        1
Warning: Unused variable 'denom' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:62.27:
      real*8 sij,fcij,dfcij,ds(3)                                       
                           1
Warning: Unused variable 'dfcij' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.17:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                 1
Warning: Unused variable 'dg' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.28:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                            1
Warning: Unused variable 'dgbar' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:62.33:
      real*8 sij,fcij,dfcij,ds(3)                                       
                                 1
Warning: Unused variable 'ds' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:59.15:
      real*8 Eu,astar,astarp,third,sixth                                
               1
Warning: Unused variable 'eu' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:62.21:
      real*8 sij,fcij,dfcij,ds(3)                                       
                     1
Warning: Unused variable 'fcij' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.14:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
              1
Warning: Unused variable 'g' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.32:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                                1
Warning: Unused variable 'gam' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.22:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                      1
Warning: Unused variable 'gbar' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:60.24:
      real*8 pp,phiforce,dUdrij,dUdsij,dUdrijm(3),force,forcem          
                        1
Warning: Unused variable 'phiforce' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:61.36:
      real*8 B,r,recip,phi,phip,rhop,a                                  
                                    1
Warning: Unused variable 'rhop' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_force.F:65.50:
      real*8 G,dG,Gbar,dGbar,gam,shpi(3),shpj(3),Z,denom                
                                                  1
Warning: Unused variable 'z' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'stranal':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3675:0: warning: 'istart2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       qstrana2=qstrana1(istart2:iend-1)
 ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:182:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:196:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp: In member function 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:231:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (_ef_atom)
        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:250:10: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
       if (_vf_atom)
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:313:16:   required from here
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_answer.cpp:224:7: warning: unused variable 'ii' [-Wunused-variable]
   int ii, vstart=0, iend=_inum;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F: In function 'srthb':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1529:0: warning: 'k1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ihb(nhb,6)=k1
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1530:0: warning: 'k2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ihb(nhb,7)=k2
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F:1531:0: warning: 'k3' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ihb(nhb,8)=k3
 ^
[  1%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:557.12:
        Z = Z_meam(a)                                                   
            1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:1031.11:
      kk = pp                                                           
           1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:179.31:
      real*8 phiaa,phibb,phitmp                                         
                               1
Warning: Unused variable 'phitmp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:174.20:
      real*8 r, temp                                                    
                    1
Warning: Unused variable 'temp' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:343.15:
      real*8 a1,a2,a12                                                  
               1
Warning: Unused variable 'a1' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:343.22:
      real*8 a1,a2,a12                                                  
                      1
Warning: Unused variable 'a12' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:343.18:
      real*8 a1,a2,a12                                                  
                  1
Warning: Unused variable 'a2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:357.29:
      character*3 latta,lattb                                           
                             1
Warning: Unused variable 'lattb' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:348.19:
      real*8 rhoa01,rhoa11,rhoa21,rhoa31                                
                   1
Warning: Unused variable 'rhoa01' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:349.19:
      real*8 rhoa02,rhoa12,rhoa22,rhoa32                                
                   1
Warning: Unused variable 'rhoa02' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:348.26:
      real*8 rhoa01,rhoa11,rhoa21,rhoa31                                
                          1
Warning: Unused variable 'rhoa11' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:349.26:
      real*8 rhoa02,rhoa12,rhoa22,rhoa32                                
                          1
Warning: Unused variable 'rhoa12' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:348.33:
      real*8 rhoa01,rhoa11,rhoa21,rhoa31                                
                                 1
Warning: Unused variable 'rhoa21' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:349.33:
      real*8 rhoa02,rhoa12,rhoa22,rhoa32                                
                                 1
Warning: Unused variable 'rhoa22' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:348.40:
      real*8 rhoa01,rhoa11,rhoa21,rhoa31                                
                                        1
Warning: Unused variable 'rhoa31' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:349.40:
      real*8 rhoa02,rhoa12,rhoa22,rhoa32                                
                                        1
Warning: Unused variable 'rhoa32' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:345.37:
      real*8 G1,G2,s1(3),s2(3),s12(3),rho0_1,rho0_2                     
                                     1
Warning: Unused variable 's12' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:354.28:
      real*8 arat,scrn,scrn2                                            
                            1
Warning: Unused variable 'scrn2' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:711.19:
      real*8 rratio,C,x,sijk                                            
                   1
Warning: Unused variable 'rratio' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:631.44:
      real*8 rhoa01,rhoa02,a1,a2,rho01,rho02                            
                                            1
Warning: Unused variable 'rho02' declared at (1)
[  1%] Building Fortran object CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:22:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:42:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:62:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:82:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:101:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:121:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:141:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:162:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:183:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:204:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:223:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:242:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:261:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
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      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*20 qkeyw                                                
                        1
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:280:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F: In function 'get_zij2':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:299:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:760:0: warning: 'numscr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       S = sijk**numscr
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*25 qfile                                                
                        1
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
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      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*60 qremark,qremset,qmolset                              
                                  1
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:320:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:339:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:359:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F:379:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'staint':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1123:0: warning: 'pi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T1=HALF*PI
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:1128:0: warning: 'two' may be used uninitialized in this function [-Wmaybe-uninitialized]
       IF (C(I,1).GE.ZERO.AND.C(I,2).LT.ZERO) T1=TWO*PI-T1
 ^
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/serial /builddir/build/BUILD/lammps-patch_17Jan2018/serial /builddir/build/BUILD/lammps-patch_17Jan2018/serial/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
Scanning dependencies of target ocl_get_devices
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
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make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
[  1%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ucl_get_devices.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DUCL_OPENCL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIE   -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ucl_get_devices.cpp
[  1%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F: In function 'phi_meam':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:477:0: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
         rhobar2 = rho02/rho_bkgd2*G2
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_done.F:476:0: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
         rhobar1 = rho01/rho_bkgd1*G1
 ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ucl_get_devices.cpp:25:0:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'molanal':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3596:0: warning: 'iend' may be used uninitialized in this function [-Wmaybe-uninitialized]
       iend=istart+5
 ^
[  1%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_global.F:16.63:
      subroutine meam_setup_global(nelt, lat, z, ielement, atwt, alpha, 
                                                               1
Warning: Unused dummy argument 'atwt' at (1)
[  1%] Building Fortran object CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F -o CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:135.26:
        nn2_meam(i1,i2) = value                                         
                          1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:159.16:
        augt1 = value                                                   
                1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:173.17:
        ialloy = value                                                  
                 1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:177.20:
        mix_ref_t = value                                               
                    1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:181.21:
        erose_form = value                                              
                     1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:189.26:
        zbl_meam(i1,i2) = value                                         
                          1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:193.22:
        emb_lin_neg = value                                             
                      1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_setup_param.F:197.19:
        bkgd_dyn = value                                                
                   1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
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[  1%] Linking Fortran static library libmeam.a
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/small.blk:3.7:
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     $       na_local                                                   
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   15 continue                                                          
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   25 ea=zero                                                           
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/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3800.5:
   10 continue                                                          
     1
Warning: Label 10 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3725.27:
      dimension a(3),b(3),j(3),dradc(3,3),drbdc(3,3),dtdc(3,3),         
                           1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3724:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3807.41:
      subroutine calvalhb (ja1,ja2,ja3,ix,iy,iz,arg,hr,dhrdc,dargdc)    
                                         1
Warning: Unused dummy argument 'ix' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3807.44:
      subroutine calvalhb (ja1,ja2,ja3,ix,iy,iz,arg,hr,dhrdc,dargdc)    
                                            1
Warning: Unused dummy argument 'iy' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3807.47:
      subroutine calvalhb (ja1,ja2,ja3,ix,iy,iz,arg,hr,dhrdc,dargdc)    
                                               1
Warning: Unused dummy argument 'iz' at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3812.27:
      dimension a(3),b(3),j(3),dradc(3,3),drbdc(3,3),dtdc(3,3),         
                           1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3811:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:22:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:202:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:598:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:735:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
[  2%] Linking CXX executable ocl_get_devices
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/c++   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard    -Wl,-z,relro  CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ucl_get_devices.cpp.o  -o ocl_get_devices -rdynamic -lOpenCL 
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1073:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1704:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:1830:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2435:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:2653:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3275.23:
      dimension a(3),da(6)                                              
                       1
Warning: Unused variable 'da' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3260:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3425:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3495:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3902.18:
      DIMENSION  A(3),DRDA(3),DADC(4),DRADC(3,4),DRBDC(3,4),            
                  1
Warning: Unused variable 'a' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3904.10:
     $DNDC(3,4)                                                         
          1
Warning: Unused variable 'dndc' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3902.26:
      DIMENSION  A(3),DRDA(3),DADC(4),DRADC(3,4),DRBDC(3,4),            
                          1
Warning: Unused variable 'drda' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3903.44:
     $DRCDC(3,4),DHDDC(3,4),DHEDC(3,4),DRVDC(3,4),DTDC(3,4),            
                                            1
Warning: Unused variable 'drvdc' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3903.54:
     $DRCDC(3,4),DHDDC(3,4),DHEDC(3,4),DRVDC(3,4),DTDC(3,4),            
                                                      1
Warning: Unused variable 'dtdc' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3905.17:
      dimension j(4),dvdc1(3,3),dargdc1(3,3),dvdc2(3,3),dargdc2(3,3)    
                 1
Warning: Unused variable 'j' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3898:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'readc':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:993:0: warning: 'nmmsav' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (mdstep.gt.0.or.nit.gt.0) nmm=nmmsav
 ^
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
[  2%] Built target ocl_get_devices
[  2%] Building Fortran object CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F.o
/usr/bin/gfortran  -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules  -fPIC   -fno-second-underscore -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F -o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F.o
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/small.blk:3.7:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:46:
     $       na_local                                                   
       1
Warning: Nonconforming tab character at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:285.5:
   40 format ('    Iter.     a             b          c        px',     
     1
Warning: Label 40 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:284.5:
   30 format ('   Iter.  Tsys    Tzone1  Tset1   Tzone2  Tset2')        
     1
Warning: Label 30 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:281.5:
   20 format ('  Iter.      Ebond       Eatom       Elp        Emol',   
     1
Warning: Label 20 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:277.5:
   10 format ('   Iter. Nmol    Epot         Ekin      Etot ',          
     1
Warning: Label 10 at (1) defined but not used
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:37:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:32.23:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*2 qaset,qadd                                            
                       1
Warning: Unused variable 'qaset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.39:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                       1
Warning: Unused variable 'qbgfaxes' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:34.47:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*5 qlabel,qffty,qbgfaxes,qbgfsgn,qresi3                  
                                               1
Warning: Unused variable 'qbgfsgn' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:36.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*25 qfile                                                
                        1
Warning: Unused variable 'qfile' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:35.24:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*20 qkeyw                                                
                        1
Warning: Unused variable 'qkeyw' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:38.34:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*60 qremark,qremset,qmolset                              
                                  1
Warning: Unused variable 'qremset' declared at (1)
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/cbka.blk:31.26:
    Included at /builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F:145:
      character*1 qr,qrset,qresi2                                       
                          1
Warning: Unused variable 'qrset' declared at (1)
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F: In function 'boncor':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:474:0: warning: 'exphu4' may be used uninitialized in this function [-Wmaybe-uninitialized]
      $vp132*vp131*exphu4*2.0*bopio
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:481:0: warning: 'exphu3' may be used uninitialized in this function [-Wmaybe-uninitialized]
      $vp132*vp131*exphu4*2.0*bopi2o
 ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F: In function 'writeen':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F:3398:0: warning: 'ittr' may be used uninitialized in this function [-Wmaybe-uninitialized]
      $trstra(i2),thg(ittr)
 ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  2%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F: In function 'efield':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3454:0: warning: 'vfieldx' may be used uninitialized in this function [-Wmaybe-uninitialized]
       efih=vfieldx*c1*c1c*ch(i1)*c(i1,1)
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F: In function 'restraint':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F:3662:0: warning: 'dist' may be used uninitialized in this function [-Wmaybe-uninitialized]
       dist=dist-rmstra1(i1)
 ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  3%] Linking Fortran static library libreax.a
/usr/bin/cmake3 -P CMakeFiles/reax.dir/cmake_clean_target.cmake
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/reax.dir/link.txt --verbose=1
/usr/bin/ar qc libreax.a  CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_charges.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_connect.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_inout.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_lammps.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_poten.F.o CMakeFiles/reax.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/reax/reax_reac.F.o
/usr/bin/ranlib libreax.a
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
[  3%] Built target reax
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.cpp
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck_ext.cpp
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  4%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long_ext.cpp
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  5%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long_ext.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.cpp
[  6%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_ext.cpp
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp:533:16:   required from here
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
   int eflag, vflag;
              ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_alloy_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_fs_ext.cpp
[  8%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss_ext.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne_ext.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_ext.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf_ext.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand_ext.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_ext.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs_ext.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long_ext.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie_ext.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_kernel.h:27:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm_ext.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft_ext.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw_ext.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table_ext.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_ext.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid_ext.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_ext.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/gpu -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
                         ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl_ext.cpp.o
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In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_timer.h:28:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_17Jan2018/lib/gpu/geryon/ocl_device.h:371:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
   cl_context_properties props[3];
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp
[ 17%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp: In member function 'virtual void LAMMPS_NS::AngleZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_zero.cpp:133:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp: In member function 'virtual void LAMMPS_NS::AngleHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp:338:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp:347:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/angle_hybrid.cpp:350:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 17%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom_map.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp: In member function 'int LAMMPS_NS::Atom::memcheck(const char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp:2261:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (strlen(memstr) + n >= memlength) {
                             ^
[ 17%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom_vec.cpp.o
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[ 17%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom_vec_atomic.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp: In member function 'void LAMMPS_NS::Atom::data_atoms(int, char*, LAMMPS_NS::tagint, int, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/atom.cpp:925:48: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       imagedata = ((imageint) (atoi(values[iptr]) + IMGMAX) & IMGMASK) |
                                                ^
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp: In member function 'virtual void LAMMPS_NS::BondHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp:322:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp:331:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_hybrid.cpp:334:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp: In member function 'virtual void LAMMPS_NS::BondZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/bond_zero.cpp:131:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/change_box.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/change_box.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/change_box.cpp
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/citeme.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/citeme.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/citeme.cpp
[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute.cpp.o
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[ 19%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_aggregate_atom.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp: In member function 'virtual void LAMMPS_NS::CommBrick::borders()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_brick.cpp:715:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
                            ^
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp: In member function 'void LAMMPS_NS::CommTiled::box_drop_brick(int, double*, double*, int&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp:1503:17: warning: 'dir' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += dir;
                 ^
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angmom_chunk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angmom_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angmom_chunk.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp: In member function 'virtual void LAMMPS_NS::CommTiled::borders()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/comm_tiled.cpp:821:9: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
         for (i = atom->nlocal; i < nlast; i++) {
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp: In member function 'int LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp:169:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp:167:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp:208:22: warning: 'ebuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ebuf[n] = 0.0;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_angle_local.cpp:202:17: warning: 'tbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           tbuf[n] = 180.0*acos(c)/MY_PI;
                 ^
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_centro_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_centro_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_centro_atom.cpp
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp: In member function 'int LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:315:28: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engrot;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:312:28: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engvib;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:318:30: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engtrans;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:306:28: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = engpot;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:321:34: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = sqrt(omegasq);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:324:26: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ptr[n] = vvib;
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:201:47: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_bond_local.cpp:201:29: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         btype = onemols[imol]->bond_type[iatom][i];
                             ^
[ 20%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cluster_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cluster_atom.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cna_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_cna_atom.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1511:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1512:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap >= boxhi[idim]) xremap -= prd[idim];
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1511:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (xremap < boxlo[idim]) xremap += prd[idim];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1613:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1614:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap >= boxhi[jdim]) yremap -= prd[jdim];
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1613:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (yremap < boxlo[jdim]) yremap += prd[jdim];
                              ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com_chunk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_com_chunk.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_contact_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_contact_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_contact_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp: In member function 'void LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1746:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1747:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap >= boxhi[kdim]) zremap -= prd[kdim];
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:1746:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (zremap < boxlo[kdim]) zremap += prd[kdim];
                              ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_coord_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_coord_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_coord_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp: In constructor 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:413:22: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  delta[idim] *= scale;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:263:59: warning: 'idim' may be used uninitialized in this function [-Wmaybe-uninitialized]
         maxvalue[idim] = force->numeric(FLERR,arg[iarg+3]);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_chunk_atom.cpp:197:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"region") == 0) {
                        ^
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp
[ 21%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dipole_chunk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dipole_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dipole_chunk.cpp
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_displace_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_displace_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_displace_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp: In member function 'int LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp:162:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp:161:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_dihedral_local.cpp:219:17: warning: 'pbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           pbuf[n] = 180.0*atan2(s,c)/MY_PI;
                 ^
[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_erotate_sphere.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_erotate_sphere_atom.cpp.o
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[ 22%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_global_atom.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_global_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_global_atom.cpp:521:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_global_atom.cpp:452:29: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
                             ^
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_hexorder_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_hexorder_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_hexorder_atom.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_inertia_chunk.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_inertia_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_inertia_chunk.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_ke.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_ke.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_ke.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp: In member function 'int LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp:163:30: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tagprev = tag[atom2] - iatom - 1;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp:162:39: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_improper_local.cpp:218:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
           cbuf[n] = 180.0*acos(c)/MY_PI;
                 ^
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_ke_atom.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp: In member function 'virtual double LAMMPS_NS::ComputePressure::compute_scalar()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp:205:42: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       scalar = (temperature->dof * boltz * t +
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp: In member function 'virtual void LAMMPS_NS::ComputePressure::compute_vector()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_pressure.cpp:252:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
                               ^
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/compute_rdf.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_bonds.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/create_bonds.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_box.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_box.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/create_box.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_atoms.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_atoms.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::add_random()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp:657:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp:657:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp: In member function 'void LAMMPS_NS::CreateAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp:229:46: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ranmol = new RanMars(lmp,molseed+comm->me);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_atoms.cpp:119:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"basis") == 0) {
                        ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/delete_bonds.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_bonds.cpp: In member function 'void LAMMPS_NS::CreateBonds::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_bonds.cpp:103:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"special") == 0) {
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/create_bonds.cpp:122:10: warning: 'style' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else if (style == SANGLE) {
          ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp: In member function 'virtual void LAMMPS_NS::DihedralHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp:323:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp:332:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_hybrid.cpp:335:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_zero.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dihedral_zero.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp: In member function 'void LAMMPS_NS::DisplaceAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp:128:5: warning: 'd_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (d_dim == 0) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/displace_atoms.cpp:146:5: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (coord_dim == 0) {
     ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_atom.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_cfg.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_cfg.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_cfg.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::box_too_small_check()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp:857:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp:857:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_dcd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_dcd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_dcd.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp: In member function 'virtual void LAMMPS_NS::Dump::write()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp:477:20: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->v = vhold;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp:476:20: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->x = xhold;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump.cpp:478:28: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     atom->image = imagehold;
                            ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp: In member function 'void LAMMPS_NS::Domain::image_check()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp:758:43: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/domain.cpp:758:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp: In member function 'virtual int LAMMPS_NS::DumpCustom::count()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:1028:20: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
      if (choose[i] && (*ptr == 0.0 && values[i] == 0.0) || 
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:1033:20: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
      if (choose[i] && (*ptr == 0.0 && value == 0.0) || 
                    ^
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_local.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_local.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_local.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_movie.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_movie.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp: In member function 'void LAMMPS_NS::DumpImage::create_image()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:1033:66: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:1027:66: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:968:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:968:41: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:831:55: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
       image->draw_cylinder(pt1,pt2,color,ldiamvalue,3);
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:1036:72: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else image->draw_cylinder(x[atom1],x[atom2],color,diameter,3);
                                                                        ^
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_xyz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_xyz.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:1034:16: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
   (*ptr != 0.0 && value != 0.0))
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:531:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *values;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_custom.cpp:530:18: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *ptr,*ptrhold;
                  ^
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/error.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/error.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/error.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp: In member function 'virtual int LAMMPS_NS::DumpImage::modify_param(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/dump_image.cpp:1300:23: warning: 'factor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int n = 6 + factor*nentry;
                       ^
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/finish.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix.cpp
[ 30%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_adapt.cpp.o
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     tmp = MAX(nneigh,nneighfull);
                                 ^
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp: In member function 'virtual void LAMMPS_NS::FixAveCorrelate::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp:537:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_chunk.cpp: In member function 'virtual void LAMMPS_NS::FixAveChunk::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_chunk.cpp:1058:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp: In member function 'virtual void LAMMPS_NS::FixAveHisto::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp:828:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_correlate.cpp:482:34: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     values[lastindex][i] = scalar;
                                  ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp: In member function 'virtual void LAMMPS_NS::FixAveHistoWeight::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo_weight.cpp:499:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp: In constructor 'LAMMPS_NS::FixAveHisto::FixAveHisto(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_histo.cpp:233:10: warning: 'kindflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else if (kindflag != kind)
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:700:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_vector(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:911:53: warning: ignoring return value of 'int ftruncate(int, __off_t)', declared with attribute warn_unused_result [-Wunused-result]
       if (fileend > 0) ftruncate(fileno(fp),fileend);
                                                     ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_aveforce.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_aveforce.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_box_relax.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_box_relax.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In member function 'int LAMMPS_NS::FixAveTime::column_length(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:971:9: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (lengthone != nrows)
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In member function 'void LAMMPS_NS::FixAveTime::invoke_scalar(LAMMPS_NS::bigint)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:629:29: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else vector[i] += scalar;
                             ^
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_controller.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_controller.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp: In member function 'void LAMMPS_NS::FixBalance::rebalance()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_balance.cpp:291:67: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
                                                                   ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp: In constructor 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_ave_time.cpp:411:9: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (value == -1)
         ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deprecated.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deprecated.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deprecated.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_drag.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_drag.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_drag.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_dt_reset.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_dt_reset.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_dt_reset.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_enforce2d.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp: In constructor 'LAMMPS_NS::FixDeform::FixDeform(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_deform.cpp:188:18: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
         set[index].style = VARIABLE;
                  ^
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_gravity.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_halt.cpp: In member function 'virtual void LAMMPS_NS::FixHalt::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_halt.cpp:188:40: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'LAMMPS_NS::bigint {aka long long int}' [-Wformat=]
           id,update->ntimestep,attvalue);
                                        ^
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_indent.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_momentum.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_momentum.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nh.cpp
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.cpp:17:0:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.h: In constructor 'LAMMPS_NS::FixNeighHistory::FixNeighHistory(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.h:76:12: warning: 'LAMMPS_NS::FixNeighHistory::valuepartner' will be initialized after [-Wreorder]
   double **valuepartner;        // values for the partners
            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.h:34:15: warning:   'LAMMPS_NS::Pair* LAMMPS_NS::FixNeighHistory::pair' [-Wreorder]
   class Pair *pair;             // ptr to pair style that uses neighbor history
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_neigh_history.cpp:36:1: warning:   when initialized here [-Wreorder]
 FixNeighHistory::FixNeighHistory(LAMMPS *lmp, int narg, char **arg) :
 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp: In member function 'virtual void LAMMPS_NS::FixMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp:847:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp:817:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp:787:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp: In constructor 'LAMMPS_NS::FixMove::FixMove(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_move.cpp:176:24: warning: 'iarg' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (strcmp(arg[iarg],"units") == 0) {
                        ^
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_nh_sphere.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_recenter.cpp: In member function 'virtual void LAMMPS_NS::FixRecenter::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_recenter.cpp:182:41: warning: 'bboxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_recenter.cpp:182:53: warning: 'bboxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
     ztarget = bboxlo[2] + zcom*(bboxhi[2] - bboxlo[2]);
                                                     ^
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_setforce.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_temp_csvr.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_temp_csvr.cpp
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_temp_rescale.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_temp_rescale.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_temp_rescale.cpp
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_tmd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_tmd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_tmd.cpp
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_vector.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_vector.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_vector.cpp
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_viscous.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_viscous.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_tmd.cpp: In member function 'void LAMMPS_NS::FixTMD::readfile(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_tmd.cpp:457:7: warning: 'imageflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (imageflag)
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_vector.cpp: In constructor 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_vector.cpp:149:26: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     extarray = finalvalue;
                          ^
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_harmonic.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj1043.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj1043.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj126.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj126.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_lj93.cpp.o
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[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_reflect.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall.cpp: In constructor 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall.cpp:77:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_region.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_region.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_region.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/force.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/force.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/force.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_reflect.cpp: In constructor 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/fix_wall_reflect.cpp:66:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_group.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_group.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_group.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp: In member function 'void LAMMPS_NS::Group::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp:724:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&ngroup,sizeof(int),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp:736:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp:740:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(names[i],sizeof(char),n,fp);
                                                     ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_neigh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_neigh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_neigh.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp: In member function 'void LAMMPS_NS::Image::draw_cube(double*, double*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/image.cpp:516:31: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
           tdir[2] = camDir[2] * t;
                               ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_store.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_store.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_store.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_time.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp: In member function 'void LAMMPS_NS::Group::assign(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/group.cpp:295:12: warning: 'category' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else if (category == MOLECULE) tattribute = atom->molecule;
            ^
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_var.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_var.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/imbalance_var.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/improper.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_zero.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_zero.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/info.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/info.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/info.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp: In member function 'virtual void LAMMPS_NS::ImproperHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp:320:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp:329:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/improper_hybrid.cpp:332:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/input.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/input.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/input.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/integrate.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/integrate.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/integrate.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/info.cpp: In function 'void print_columns(FILE*, std::vector<std::basic_string<char> >&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/info.cpp:1102:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for (int i = 0; i < styles.size(); ++i) {
                                   ^
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/irregular.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/irregular.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/irregular.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/kspace.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/kspace.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/kspace.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/lammps.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/lammps.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/lammps.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/lattice.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/lattice.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/lattice.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/input.cpp: In member function 'void LAMMPS_NS::Input::partition()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/input.cpp:1151:3: warning: 'yesflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (yesflag) {
   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp: In function 'void lammps_create_atoms(void*, int, LAMMPS_NS::tagint*, int*, double*, double*, LAMMPS_NS::imageint*, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp:1068:76: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'LAMMPS_NS::bigint {aka long long int}' [-Wformat=]
               "invalid total atoms %ld %ld",lmp->atom->natoms,natoms_prev+n);
                                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/library.cpp:1068:76: warning: format '%ld' expects argument of type 'long int', but argument 4 has type 'LAMMPS_NS::bigint {aka long long int}' [-Wformat=]
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp: In function 'void MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:260:52: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:260:39: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:260:26: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:260:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:271:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[3] = c_phi*p[3] + s_phi*kp[3];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:270:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[2] = c_phi*p[2] + s_phi*kp[2];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:269:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[1] = c_phi*p[1] + s_phi*kp[1];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_extra.cpp:268:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   p[0] = c_phi*p[0] + s_phi*kp[0];
                            ^
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/math_special.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin_standard.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin_standard.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nbin_standard.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp: In member function 'int LAMMPS_NS::Modify::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1363:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_global,sizeof(int),1,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1380:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1383:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_global[i],sizeof(char),n,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1386:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1389:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1392:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1395:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(state_restart_global[i],sizeof(char),n,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1405:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nfix_restart_peratom,sizeof(int),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1422:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1425:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(id_restart_peratom[i],sizeof(char),n,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1428:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1431:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(style_restart_peratom[i],sizeof(char),n,fp);
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/modify.cpp:1434:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_request.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_request.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_request.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_copy.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_copy.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_copy.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_atomonly.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp:104:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp:110:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp:108:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_bin_ghost.cpp:108:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp: In member function 'virtual void LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp:111:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp:109:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_multi.cpp:109:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp:1675:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp: In member function 'int LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/neighbor.cpp:1783:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (newtflag) {
     ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp:105:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp:103:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp:103:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp:104:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp:102:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_full_nsq_ghost.cpp:102:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_atomonly_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_atomonly_newton.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp:108:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp:106:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff.cpp:106:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp:116:52: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                      tag[j]-tagprev);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp:114:66: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newtoff_ghost.cpp:114:50: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 which = find_special(onemols[imol]->special[iatom],
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp:140:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp:114:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp:112:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_bin_newton_tri.cpp:112:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp:115:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newtoff.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp:123:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp:121:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton_tri.cpp:121:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp:148:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp:146:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_multi_newton.cpp:146:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp:106:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp:104:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp:104:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp:115:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp:113:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp:113:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newtoff_ghost.cpp:127:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (includegroup && !(mask[j] & bitmask)) continue;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp:123:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp:121:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp:121:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_nsq_newton.cpp:91:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:174:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:132:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:130:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:130:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:152:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newtoff.cpp:72:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:220:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:178:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:176:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:176:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:153:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:174:5: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
     index += n;
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:71:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:220:45: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:221:36: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton.cpp:219:29: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ilist_middle[inum] = i;
                             ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:182:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:140:50: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                    tag[j]-tagprev);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:138:64: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:138:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
               which = find_special(onemols[imol]->special[iatom],
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:160:41: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
               neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                         ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_bin_newton_tri.cpp:72:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:169:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:130:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:128:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:128:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:148:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:76:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newtoff.cpp:114:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp:39:13: warning: unused variable 'm' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp:39:17: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newtoff.cpp:46:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:189:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:149:48: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                  tag[j]-tagprev);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:147:62: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:147:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
             which = find_special(onemols[imol]->special[iatom],
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:168:39: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
             neighptr_middle[n_middle++] = j ^ (which << SBBITS);
                                       ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:224:9: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
         errorflag = 2;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:78:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_respa_nsq_newton.cpp:117:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp:38:13: warning: unused variable 'm' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp:38:17: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton.cpp:45:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp:39:13: warning: unused variable 'm' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp:39:17: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,k,m,n,nn,ibin;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_bin_newton_tri.cpp:46:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newtoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newtoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp:39:11: warning: unused variable 'm' [-Wunused-variable]
   int i,j,m,n,nn,bitmask;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp:39:15: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,m,n,nn,bitmask;
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp:46:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newtoff.cpp:80:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newton.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_halffull_newton.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp: In member function 'virtual void LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp:40:11: warning: unused variable 'm' [-Wunused-variable]
   int i,j,m,n,nn,itag,jtag,bitmask;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp:40:15: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,m,n,nn,itag,jtag,bitmask;
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_half_size_nsq_newton.cpp:82:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (includegroup && !(mask[j] & bitmask)) continue;
                                     ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp:152:45: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       firstneigh_middle[i] = neighptr_middle;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp:153:36: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       numneigh_middle[i] = n_middle;
                                    ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/neigh_list.h:18:0,
                 from /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp:16:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/my_page.h:223:67: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (posix_memalign(&ptr, LAMMPS_MEMALIGN, pagesize*sizeof(T)))
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_respa.cpp:64:16: note: 'ipage_middle' was declared here
   MyPage<int> *ipage_middle;
                ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipSize::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:36:17: warning: unused variable 'm' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:36:21: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:36:45: warning: unused variable 'dnum' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:36:50: warning: unused variable 'dnumbytes' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:37:10: warning: unused variable 'jtag' [-Wunused-variable]
   tagint jtag;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:40:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size.cpp:42:7: warning: unused variable 'nlocal' [-Wunused-variable]
   int nlocal = atom->nlocal;
       ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipSizeOff2on::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp:37:17: warning: unused variable 'm' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp:37:21: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp:37:45: warning: unused variable 'dnum' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on.cpp:37:50: warning: unused variable 'dnumbytes' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,dnum,dnumbytes;
                                                  ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_2d.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_2d.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp: In member function 'virtual void LAMMPS_NS::NPairSkipSizeOff2onOneside::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:40:17: warning: unused variable 'm' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,flip,dnum,dnumbytes,tmp;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:40:21: warning: unused variable 'nn' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,flip,dnum,dnumbytes,tmp;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:40:50: warning: unused variable 'dnum' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,flip,dnum,dnumbytes,tmp;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:40:55: warning: unused variable 'dnumbytes' [-Wunused-variable]
   int i,j,ii,jj,m,n,nn,itype,jnum,joriginal,flip,dnum,dnumbytes,tmp;
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:41:10: warning: unused variable 'jtag' [-Wunused-variable]
   tagint jtag;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/npair_skip_size_off2on_oneside.cpp:44:11: warning: unused variable 'tag' [-Wunused-variable]
   tagint *tag = atom->tag;
           ^
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_3d.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_bin_3d.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_ghost_bin_2d.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_ghost_bin_2d.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_ghost_bin_2d.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_ghost_bin_3d.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_ghost_bin_3d.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/nstencil_full_ghost_bin_3d.cpp
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[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:282:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:286:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&AA[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:287:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&BB[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:288:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&aa[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:289:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:290:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&beta[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp: In member function 'virtual void LAMMPS_NS::PairBeck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:321:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_beck.cpp:322:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp: In member function 'void LAMMPS_NS::Pair::write_file(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:1656:5: warning: 'rsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (rsq < cutsq[itype][jtype]) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:1667:32: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (atom->q) atom->q = q_hold;
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp: In member function 'virtual void LAMMPS_NS::Pair::init_tables(double, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:408:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (msmflag) ftable[i] = qqrd2e/r * fgamma;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:395:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * egamma;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:399:30: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         etable[i] = qqrd2e/r * derfc;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:409:61: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair.cpp:409:56: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           else ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:334:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:338:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:339:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:340:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:341:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:342:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:343:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp: In member function 'virtual void LAMMPS_NS::PairBorn::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:374:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:375:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:376:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born.cpp:377:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:372:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:373:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:374:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:375:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:407:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:410:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:411:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:168:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:164:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:165:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:169:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:164:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:369:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:370:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:371:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:373:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:374:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:406:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:407:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:408:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:409:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:410:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:487:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:488:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:482:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:483:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:482:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:489:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:490:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:484:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:485:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_dsf.cpp:484:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:312:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:316:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:317:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:318:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:319:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp: In member function 'virtual void LAMMPS_NS::PairBuck::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:348:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:349:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:350:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck.cpp:351:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:171:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:168:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_born_coul_wolf.cpp:172:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:366:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:370:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:371:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:372:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:373:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:374:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:405:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:406:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:407:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:408:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:409:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:467:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:467:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:146:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_buck_coul_cut.cpp:146:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:249:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:252:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&cut[i][j],sizeof(double),1,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:276:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:277:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_cut.cpp:278:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp:153:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp:154:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp:155:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_debye.cpp:156:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_streitz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_streitz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_streitz.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:257:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:282:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:283:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_dsf.cpp:284:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:254:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp: In member function 'virtual void LAMMPS_NS::PairCoulWolf::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:278:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alf,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:279:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:280:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp: In member function 'virtual double LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:318:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:319:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_coul_wolf.cpp:318:41: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc-e_shift*r);
                                         ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:319:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:323:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:324:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:325:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp: In member function 'virtual void LAMMPS_NS::PairDPD::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:353:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&temperature,sizeof(double),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:354:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:355:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd.cpp:356:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:234:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:238:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:239:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp: In member function 'virtual void LAMMPS_NS::PairDPDTstat::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:267:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_start,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:268:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_stop,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:269:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:270:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_dpd_tstat.cpp:271:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:285:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:289:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:290:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&b[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:291:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp: In member function 'virtual void LAMMPS_NS::PairGauss::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:318:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:319:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_gauss.cpp:320:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:668:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(&nstyles,sizeof(int),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:685:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:688:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(keywords[m],sizeof(char),n,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:694:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:698:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_lj[m],sizeof(double),4,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:701:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&n,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:705:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(special_coul[m],sizeof(double),4,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp: In member function 'virtual void LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid_overlay.cpp:47:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:612:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:616:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:617:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:618:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:647:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:648:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:649:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:650:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:283:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:287:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:288:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:289:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:290:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:317:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp: In member function 'virtual void LAMMPS_NS::PairHybrid::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_hybrid.cpp:393:7: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int multflag;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp: In member function 'virtual double LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:349:32: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:346:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp: In member function 'virtual void LAMMPS_NS::PairLJCubic::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:134:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cubic.cpp:131:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:394:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj96_cut.cpp:398:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:606:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:610:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:611:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:612:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:641:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:642:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:643:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:644:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:357:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:361:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:362:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:363:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:364:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:394:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:395:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:396:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:397:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:398:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:174:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:175:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:176:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:177:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:178:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:453:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:216:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:212:71: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:212:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_cut.cpp:140:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:110:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:110:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_debye.cpp:113:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:388:44: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_lj*forcelj*r2inv;
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut.cpp:392:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:380:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:384:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:386:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:416:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:417:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:418:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:419:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:420:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:421:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:168:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:169:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:162:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:168:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:328:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:332:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:333:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:334:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shift[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:335:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp: In member function 'virtual void LAMMPS_NS::PairLJExpand::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:364:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:365:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:366:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_expand.cpp:367:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:465:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:465:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:465:37: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_cut_coul_dsf.cpp:459:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:345:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:349:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:350:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:351:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:352:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:382:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:383:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:384:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:385:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:383:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:387:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:388:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:417:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:418:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:419:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:420:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:421:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:422:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:504:51: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:500:66: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:493:38: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tc*tc*tc * (coulsw3 + coulsw4*tc);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp: In member function 'virtual double LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:439:65: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs.cpp:141:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'virtual void LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:160:58: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:170:59: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:166:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_gromacs_coul_gromacs.cpp:166:46: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                              ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:356:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:360:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:361:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:362:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:363:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:393:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:394:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:395:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:396:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp: In member function 'virtual double LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:454:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:453:60: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:449:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:287:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:291:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:292:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:293:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmoothLinear::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:320:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth_linear.cpp:321:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp: In member function 'virtual void LAMMPS_NS::PairLJSmooth::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:144:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:143:68: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ljsw2[itype][jtype]*tsq/2.0 - ljsw3[itype][jtype]*tsq*t/3.0 -
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_lj_smooth.cpp:139:27: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:269:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:273:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:274:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:275:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:276:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp: In member function 'virtual void LAMMPS_NS::PairMorse::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:304:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:305:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_morse.cpp:306:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:633:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:637:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:638:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:639:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamR[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:640:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&gamA[i][j],sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:641:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:672:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:673:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:674:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:675:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp: In member function 'virtual void LAMMPS_NS::PairMIECut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:396:46: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             fpair = factor_mie*forcemie*r2inv;
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_mie_cut.cpp:400:61: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                              evdwl,0.0,fpair,delx,dely,delz);
                                                             ^
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:250:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:254:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&prefactor[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:255:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp: In member function 'virtual void LAMMPS_NS::PairSoft::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:280:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_soft.cpp:281:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp: In member function 'void LAMMPS_NS::PairTable::read_table(LAMMPS_NS::PairTable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:378:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:380:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:381:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:387:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:415:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:977:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:978:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:979:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewaldflag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:980:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&pppmflag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:981:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&msmflag,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:982:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dispersionflag,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:983:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tip4pflag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp: In member function 'virtual double LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:1042:41: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:1042:14: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:1039:35: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phi = tb->e[itable] + fraction*tb->de[itable];
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:256:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:260:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:261:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp: In member function 'virtual void LAMMPS_NS::PairYukawa::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:288:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kappa,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:289:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:290:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_yukawa.cpp:291:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp: In member function 'virtual void LAMMPS_NS::PairTable::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:177:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:177:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_table.cpp:174:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp:176:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp:180:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp: In member function 'virtual void LAMMPS_NS::PairZero::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp:205:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zero.cpp:206:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&coeffflag,sizeof(int),1,fp);
                                       ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/python.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/python.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/python.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp: In member function 'virtual void LAMMPS_NS::PairZBL::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp:142:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
        (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp: In member function 'virtual double LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/pair_zbl.cpp:290:45: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
       (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                             ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/random_mars.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/random_mars.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/random_park.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/random_park.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp: In member function 'void LAMMPS_NS::ProcMap::output(char*, int*, int***)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp:688:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[5] = kme + 1;
                ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp:687:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[4] = jme + 1;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp:686:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
   vec[3] = ime + 1;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp: In member function 'int LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/procmap.cpp:882:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return index;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp:557:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp:485:29: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else lo[dim] = valuehalf;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp: In member function 'void LAMMPS_NS::ReadData::parse_keyword(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_data.cpp:1952:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if ((blank == strlen(line)) || (line[blank] == '#')) {
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::seek(LAMMPS_NS::bigint, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp:228:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp: In member function 'void LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/rcb.cpp:1049:73: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (readnumber == 2) MPI_Send(NULL,0,MPI_INT,procpartner2,0,world);
                                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp: In member function 'LAMMPS_NS::bigint LAMMPS_NS::ReadDump::next(LAMMPS_NS::bigint, LAMMPS_NS::bigint, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp:298:5: warning: 'eofflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (eofflag) ntimestep = -1;
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_dump.cpp:270:10: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
   bigint ntimestep;
          ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/reader.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_native.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_native.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_search(char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:628:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (strlen(&ep->d_name[nbegin]) < n) {
                                       ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_xyz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_xyz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/reader_xyz.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:302:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:306:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:309:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:313:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:319:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:379:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&flag,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:382:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fread(&procsperfile,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:391:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:395:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(&n,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:401:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fread(buf,sizeof(double),n,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::file_layout()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:1027:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(all_written_send_sizes,sizeof(int),nprocs_file,fp);
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'char* LAMMPS_NS::ReadRestart::read_string()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:1209:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(value,sizeof(char),n,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_int_vec(int, int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:1221:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(int),n,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::read_double_vec(int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/read_restart.cpp:1232:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (me == 0) fread(vec,sizeof(double),n,fp);
                                              ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cone.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cone.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp: In member function 'int LAMMPS_NS::Region::surface(double, double, double, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp:192:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delz = xorig[2] - zs;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp:191:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].dely = xorig[1] - ys;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region.cpp:190:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       contact[i].delx = xorig[0] - xs;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp: In member function 'virtual int LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp:336:28: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   add_contact(0,x,xp,yp,zp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp:336:28: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_block.cpp:336:28: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_intersect.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_intersect.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_plane.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/region_plane.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp: In member function 'virtual int LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp:655:30: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     add_contact(0,x,xp,yp,zp);
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp:655:30: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/region_cylinder.cpp:655:30: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/run.cpp: In member function 'void LAMMPS_NS::Run::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/run.cpp:173:41: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (stopflag) update->endstep = stop;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/run.cpp:171:45: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (startflag) update->beginstep = start;
                                             ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/special.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/special.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/special.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/thermo.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/thermo.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/thermo.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp: In member function 'void LAMMPS_NS::Set::set(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp:844:35: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
       quat[1] = xvalue * sintheta2;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp: In member function 'void LAMMPS_NS::Set::setrandom(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/set.cpp:1030:24: warning: 'quat' may be used uninitialized in this function [-Wmaybe-uninitialized]
           quat[1] = 0.0;
                        ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/timer.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/timer.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/timer.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::add_world(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp:190:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         } else if (strlen(str) == len-1) {
                                       ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/update.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/update.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/update.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp: In member function 'void LAMMPS_NS::Universe::reorder(char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/universe.cpp:149:38: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
   MPI_Comm_split(uorig,0,key,&uworld);
                                      ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:671:33: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
       fscanf(fp,"%d",&nextindex);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::set(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:547:63: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(zvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:542:63: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(yvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:537:63: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
       else input->variable->compute_atom(xvar,igroup,NULL,3,0);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:460:17: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vz *= zscale;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:456:17: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vy *= yscale;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:452:17: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
     vx *= xscale;
                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp: In member function 'void LAMMPS_NS::Velocity::ramp(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:650:3: warning: 'v_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (v_dim == 2 && domain->dimension == 2)
   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:672:3: warning: 'coord_dim' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (coord_dim == 0) {
   ^
In file included from /builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:34:0:
/builddir/build/BUILD/lammps-patch_17Jan2018/src/memory.h: In member function 'void LAMMPS_NS::Velocity::create(double, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/memory.h:172:5: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
     sfree(array[0]);
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/velocity.cpp:168:12: note: 'vhold' was declared here
   double **vhold;
            ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/verlet.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/verlet.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_data.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/write_data.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp: In member function 'void LAMMPS_NS::WriteCoeff::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp:97:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(str,256,one);  // coeff
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp:101:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(str,256,one);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_coeff.cpp:104:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(str,256,one);
                           ^
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_restart.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/write_restart.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3882:39: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
   } else argstack[nargstack++] = value;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp: In member function 'void LAMMPS_NS::WriteDump::command(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/write_dump.cpp:84:16: warning: 'dump' may be used uninitialized in this function [-Wmaybe-uninitialized]
   dump->write();
                ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate_boolean(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:4631:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious,flag1,flag2;
       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_temp_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_temp_asphere.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'virtual double LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp:139:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertia[0] = tbonus[tri[i]].inertia[0];
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp:130:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         length = lbonus[line[i]].length;
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/compute_erotate_asphere.cpp:109:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nh_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nh_asphere.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nph_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nph_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nph_asphere.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3955:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int index,nvec,nstride;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:4127:52: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (nvec > 1) xvalue = (double) i / (nvec-1);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:4140:5: warning: 'method' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (method == SLOPE) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'double LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:1170:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int op,opprevious;
       ^
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_npt_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_npt_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_npt_asphere.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere_noforce.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere_noforce.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere_noforce.cpp
[ 63%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_line.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_line.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_line.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_tri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_tri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'virtual void LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nve_asphere_noforce.cpp:94:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = bonus[ellipsoid[i]].shape;
                                 ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nvt_asphere.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nvt_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/fix_nvt_asphere.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:950:11: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *vstore;
           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3638:38: warning: 'newtree' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (tree) newtree->type = CWIGGLE;
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3644:37: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
       double value = value1 + value2*(1.0-cos(omega*delta*update->dt));
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:3347:42: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       argstack[nargstack++] = sqrt(value1);
                                          ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp: In member function 'void LAMMPS_NS::Variable::set(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:185:9: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int nfirst,nlast;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/variable.cpp:206:22: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
     num[nvar] = nlast;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:467:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:470:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:474:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:478:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:479:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:480:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:512:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamma,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:513:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&upsilon,sizeof(double),1,fp);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:514:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:515:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:516:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:517:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:445:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     if (me == 0) fread(&setwell[i],sizeof(int),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:448:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&well[i][0],sizeof(double),3,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:452:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:456:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:457:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:458:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:486:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:487:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp: In member function 'virtual void LAMMPS_NS::PairLineLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_line_lj.cpp:308:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/body_nparticle.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/body_nparticle.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp: In member function 'double LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double (*)[3], double*, double, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:730:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:729:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:728:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:730:21: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:729:21: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:728:21: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:730:51: warning: '*((void*)& dUr2 +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:729:51: warning: '*((void*)& dUr2 +8)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:728:51: warning: 'dUr2' may be used uninitialized in this function [-Wmaybe-uninitialized]
     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp: In member function 'virtual void LAMMPS_NS::PairGayBerne::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_gayberne.cpp:220:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp: In member function 'virtual void LAMMPS_NS::PairTriLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_tri_lj.cpp:382:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_body_local.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_body_local.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_temp_body.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_temp_body.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/compute_temp_body.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_nh_body.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_nh_body.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp: In member function 'virtual void LAMMPS_NS::PairRESquared::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/ASPHERE/pair_resquared.cpp:195:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_nph_body.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/fix_npt_body.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp: In member function 'virtual void LAMMPS_NS::AngleClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:376:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:377:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:378:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:379:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nangletypes,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:381:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_k[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:382:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:383:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:385:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:386:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_k2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:387:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r1[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/angle_class2.cpp:388:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ba_r2[1],sizeof(double),atom->nangletypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp: In member function 'virtual void LAMMPS_NS::BondClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp:187:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp:188:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp:189:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/bond_class2.cpp:190:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/pair_body.cpp: In member function 'virtual void LAMMPS_NS::PairBody::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/BODY/pair_body.cpp:328:59: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
                            evdwl,0.0,fpair,delx,dely,delz);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp: In member function 'virtual void LAMMPS_NS::DihedralClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:840:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:841:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:842:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:843:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:844:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:845:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&phi3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:847:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:848:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:849:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_f3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:850:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mbt_r0[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:852:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:853:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:854:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:855:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:857:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:858:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:859:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:860:63: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ebt_r0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:862:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:863:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:864:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:865:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:867:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f1_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:868:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f2_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:869:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_f3_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:870:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&at_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:872:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:873:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:874:67: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aat_theta0_2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:876:62: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:877:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r10[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/dihedral_class2.cpp:878:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bb13t_r30[1],sizeof(double),atom->ndihedraltypes,fp);
                                                                ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:310:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:314:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:315:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:316:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:345:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:346:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:347:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2.cpp:348:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp: In member function 'virtual void LAMMPS_NS::ImproperClass2::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:609:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:610:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi0[1],sizeof(double),atom->nimpropertypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:612:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k1[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:613:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k2[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:614:60: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_k3[1],sizeof(double),atom->nimpropertypes,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:615:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_1[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:616:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_2[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:617:66: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aa_theta0_3[1],sizeof(double),atom->nimpropertypes,fp);
                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:364:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:368:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:369:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:370:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:371:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:401:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:402:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:404:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:405:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:462:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:462:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_cut.cpp:144:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp: In member function 'void LAMMPS_NS::ImproperClass2::angleangle(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/improper_class2.cpp:825:58: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
                                                          ^
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/fix_wall_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/fix_wall_colloid.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:405:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:409:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:410:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:411:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:442:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:445:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:446:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:447:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:448:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:537:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:537:37: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:530:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:530:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:533:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:528:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:176:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:181:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:184:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:184:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:178:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CLASS2/pair_lj_class2_coul_long.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:610:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:614:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:615:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:650:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:651:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:652:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:653:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:654:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:655:42: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&t_target, sizeof(double),1,fp);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:656:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed, sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:657:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:658:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:659:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:660:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp: In member function 'virtual void LAMMPS_NS::PairBrownianPoly::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp:296:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian_poly.cpp:245:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp: In member function 'virtual void LAMMPS_NS::PairBrownian::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:309:42: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_pu);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_brownian.cpp:241:42: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
           Fbmag = prethermostat*sqrt(a_sh);
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:401:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (comm->me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:405:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a12[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:406:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:407:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d1[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:408:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d2[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:409:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:439:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:440:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:441:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual double LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:544:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return factor_lj*phi;
                    ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU_poly.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU_poly.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp: In member function 'virtual void LAMMPS_NS::PairColloid::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_colloid.cpp:195:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:694:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:698:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:699:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp: In member function 'virtual void LAMMPS_NS::PairLubricate::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:732:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:733:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:734:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagfld,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:735:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:736:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:737:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:738:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:739:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate.cpp:740:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1917:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1921:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_inner[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1922:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp: In member function 'virtual void LAMMPS_NS::PairLubricateU::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1954:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mu,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1955:37: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flaglog,sizeof(int),1,fp);
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1956:49: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_inner_global,sizeof(double),1,fp);
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1957:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1958:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1959:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1960:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagHI,sizeof(int),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricateU.cpp:1961:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&flagVF,sizeof(int),1,fp);
                                    ^
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate_poly.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_lubricate_poly.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_yukawa_colloid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COLLOID/pair_yukawa_colloid.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_atom_gz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_atom_gz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_atom_gz.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_cfg_gz.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_cfg_gz.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_cfg_gz.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_custom_gz.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/COMPRESS/dump_xyz_gz.cpp.o
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[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:148:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:144:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:145:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:149:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_dsf_cs.cpp:144:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:189:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:181:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:186:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:190:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:183:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_long_cs.cpp:183:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_wolf_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_wolf_cs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp:150:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp:147:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_born_coul_wolf_cs.cpp:151:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:187:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:179:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:184:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:187:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:181:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_buck_coul_long_cs.cpp:181:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp:169:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp:174:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp:171:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_coul_long_cs.cpp:171:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/atom_vec_dipole.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/atom_vec_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/atom_vec_dipole.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:542:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:518:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:542:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:542:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:548:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:545:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:441:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:445:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:446:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:447:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:184:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:189:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:193:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:186:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:186:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:496:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:448:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:500:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:501:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:502:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:477:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:478:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:479:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:530:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:480:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:531:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:532:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:533:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:70: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:54: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:47: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:31: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:70: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:298:54: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_long.cpp:303:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:238:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:245:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:351:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:355:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:356:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:357:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongDipoleLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:386:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:387:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:388:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:389:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/DIPOLE/pair_lj_long_dipole_long.cpp:390:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_freeze.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_freeze.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran_region.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran_region.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp: In member function 'void LAMMPS_NS::FixWallGran::bonded_history(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_wall_gran.cpp:797:56: warning: variable 'vrlmaginv' set but not used [-Wunused-but-set-variable]
   double relrot1,relrot2,relrot3,vrl1,vrl2,vrl3,vrlmag,vrlmaginv;
                                                        ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hertz_history.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hertz_history.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp: In member function 'virtual void LAMMPS_NS::FixPour::pre_exchange()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp:677:42: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int ninserted_mols = ninserted_atoms / natom;
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp:693:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp:651:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
                                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/fix_pour.cpp:500:30: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
         coords[0][3] = radtmp;
                              ^
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald_disp.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/ewald_disp.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:540:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp: In member function 'virtual void LAMMPS_NS::PairGranHookeHistory::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:566:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kn,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:567:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kt,sizeof(double),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:568:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gamman,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:569:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&gammat,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:570:36: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&xmu,sizeof(double),1,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GRANULAR/pair_gran_hooke_history.cpp:571:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&dampflag,sizeof(int),1,fp);
                                      ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp:69:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp:69:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
   int i,total,length,offset,num;
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d.cpp:69:22: warning: unused variable 'offset' [-Wunused-variable]
   int i,total,length,offset,num;
                      ^
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fft3d_wrap.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fix_tune_kspace.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fix_tune_kspace.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/fix_tune_kspace.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/gridcomm.cpp.o
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[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm_cg.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm_cg.cpp
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:427:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:431:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:432:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:433:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:434:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:435:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&d[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:436:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:470:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:471:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:472:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:473:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:474:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:475:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:568:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:569:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:561:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:561:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:564:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:559:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:191:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:183:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:192:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:189:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:186:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:185:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:190:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:248:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:249:28: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:244:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_born_coul_msm.cpp:243:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:404:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:408:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&a[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:409:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&rho[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:410:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&c[i][j],sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:411:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:443:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:445:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:446:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:447:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:448:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:449:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:539:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:539:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:532:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:532:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:535:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:530:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:184:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:176:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:181:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:184:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:178:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_long.cpp:178:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:185:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:182:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:181:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:185:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:243:30: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:243:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:239:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_coul_msm.cpp:238:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:360:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:364:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_a_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:365:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_rho_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:366:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&buck_c_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:367:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_buck_read[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairBuckLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:399:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_buck_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:400:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:401:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:402:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:403:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:404:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_buck_long_coul_long.cpp:405:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:297:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:300:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:326:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:327:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:328:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:329:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:330:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:377:29: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:379:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:379:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:377:29: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*erfc;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:161:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:166:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:163:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_long.cpp:163:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp: In member function 'virtual void LAMMPS_NS::MSM::direct(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1640:47: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1639:47: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1638:47: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1637:47: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1636:47: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1635:47: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_directn[k] * qtmp2;
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:152:60: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:147:37: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*egamma;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:149:46: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:149:34: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
             table = etable[itable] + fraction*detable[itable];
                                  ^
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:207:31: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:209:26: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:209:38: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
     table = etable[itable] + fraction*detable[itable];
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_coul_msm.cpp:207:31: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
     phicoul = prefactor*egamma;
                               ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp: In member function 'void LAMMPS_NS::MSM::direct_top(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1995:50: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v5sum += v5_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1994:50: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v4sum += v4_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1993:50: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v3sum += v3_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1992:50: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v2sum += v2_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1991:50: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v1sum += v1_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/msm.cpp:1990:50: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 v0sum += v0_direct_top[k] * qtmp2;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:830:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:834:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:835:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:836:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:837:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:869:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:870:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:871:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:872:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:873:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:874:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:875:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:974:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:969:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:964:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:387:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:415:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:387:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:421:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:418:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:521:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:555:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:552:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:524:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:516:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:516:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:519:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:197:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:202:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:206:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:199:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:199:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_long.cpp:206:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:217:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:221:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:214:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:214:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmm_coul_msm.cpp:221:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:900:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:904:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:905:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:906:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:907:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:939:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:940:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:941:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:942:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:943:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:944:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:945:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1053:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv + 
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1048:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1036:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1036:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1039:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1034:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:573:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:611:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:633:76: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             forcelj = r6inv * (lj1[itype][jtype]*r6inv - lj2[itype][jtype]);
                                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:590:27: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
               rinv = 1.0/r;
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:617:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:614:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:219:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:224:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:240:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv + 
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:238:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv - 
                                               ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:800:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:804:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:805:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:806:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:837:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:838:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:839:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:840:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:841:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:842:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:843:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:934:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:926:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:926:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:929:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:924:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:513:37: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:59: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:537:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:543:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:540:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:183:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:188:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:192:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:185:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_long.cpp:185:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:366:39: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:390:45: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               forcecoul = prefactor * fgamma;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:366:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:396:50: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
                 table = ptable[itable] + fraction*dptable[itable];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:393:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = vtable[itable] + fraction*dvtable[itable];
                                    ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:476:18: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:468:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:468:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:471:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:466:33: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*egamma;
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:209:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:204:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:213:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:206:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_coul_msm.cpp:206:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:537:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:538:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:539:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:540:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:541:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:543:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:544:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:545:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:546:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:547:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:548:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:549:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:415:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:420:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:417:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:410:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:409:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:337:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:333:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_cut_tip4p_long.cpp:417:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:360:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:364:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon_read[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:365:55: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma_read[i][j],sizeof(double),1,fp);
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:366:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj_read[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:397:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:398:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:399:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:400:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:401:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:402:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_coul_long.cpp:403:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ewald_order,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1549:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1550:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1551:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1552:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1553:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1555:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1556:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1557:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1558:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1559:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1560:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:476:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:477:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:478:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:479:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:480:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:980:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:976:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:949:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:945:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:383:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:388:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:385:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:378:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:377:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_tip4p_long.cpp:385:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:451:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:456:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:453:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:446:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:445:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:373:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:369:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:453:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_cg.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_cg.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:719:18: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:715:18: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[jH1][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:688:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:684:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'virtual void LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1422:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1421:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1323:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pair_lj_long_tip4p_long.cpp:1319:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp_tip4p.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp_tip4p.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_disp_tip4p.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_stagger.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_stagger.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_stagger.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_tip4p.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_tip4p.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/pppm_tip4p.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/remap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/remap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/remap.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/remap_wrap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/remap_wrap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/KSPACE/remap_wrap.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp: In member function 'virtual void LAMMPS_NS::FixQEQComb::post_force(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp:164:32: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/fix_qeq_comb.cpp:164:26: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,ii,iloop,loopmax,inum,*ilist;
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:564:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:565:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:566:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:567:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:592:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:616:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:928:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo_morse.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3384:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3390:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3392:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3394:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3396:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3398:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3400:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3402:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3404:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3406:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3408:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3410:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3412:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3414:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3416:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3418:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3420:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3422:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3424:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3426:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3428:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3430:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3432:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3434:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3436:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3438:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3440:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3442:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3444:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3446:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3448:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3450:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3452:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3454:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3456:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3458:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3460:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3462:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3464:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3466:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3468:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3470:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3472:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3474:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3476:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3481:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3483:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3485:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3487:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3489:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3491:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3493:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3495:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3497:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3499:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3501:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3503:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3505:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3507:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3509:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3511:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3513:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3515:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3517:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3519:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3521:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3526:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3528:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3530:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3532:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3534:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3536:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3538:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3540:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3542:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3549:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3550:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3551:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3555:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3559:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3562:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3565:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3569:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3572:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3579:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3580:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3581:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3583:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3587:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3591:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3595:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3602:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3603:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3604:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3606:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3611:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3615:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3620:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3628:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3629:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3630:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3631:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3636:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3640:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3645:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3653:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3654:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3655:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3657:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3662:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3666:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3672:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3681:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3682:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3683:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3685:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3690:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3694:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3700:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3709:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3710:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3711:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3713:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3718:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3722:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3728:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3737:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3738:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3739:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3741:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3746:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3750:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3756:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp: In member function 'void LAMMPS_NS::PairADP::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_adp.cpp:629:57: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fp,file->nr,&file->z2r[i][j][1]);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp: In member function 'void LAMMPS_NS::PairBOP::read_table(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4990:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for(j=0;j<strlen(s);j++) {
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5017:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for(j=0;j<strlen(s);j++) {
                       ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4981:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4982:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4987:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5016:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5083:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);  // skip first comment line
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5085:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5087:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5091:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5096:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5100:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5102:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5104:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5113:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5120:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5124:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5128:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5130:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5134:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5136:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5140:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5142:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5146:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5148:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5152:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5154:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5158:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5160:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5162:36: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
                 fgets(s,MAXLINE,fp);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5171:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5178:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5186:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5194:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5202:28: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         fgets(s,MAXLINE,fp);
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5209:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5213:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5230:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,MAXLINE,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::TORSION(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:1243:64: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:5221:5: warning: 'nws' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(nws==3) {
     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:4967:13: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int i,j,k,n,m;
             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:4024:49: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (j > 0) df[1] += c * ((double) j) * xn * yn1;
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:4064:46: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (k > 0) df[2] += c * kr * xn * yn * zn1;
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'double LAMMPS_NS::PairAIREBO::piRCSpline(double, double, double, int, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:3285:10: warning: 'piRC' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return piRC;
          ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::read_lib()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:330:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:331:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:342:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:354:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:362:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:370:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:379:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,maxlib,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:388:23: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,maxlib,fp);
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:395:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,maxlib,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:408:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:426:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:435:32: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
              fgets(s,maxlib,fp);
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:450:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:468:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:477:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,maxlib,fp);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:492:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:510:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
             fgets(s,maxlib,fp);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:519:33: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
               fgets(s,maxlib,fp);
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp: In member function 'void LAMMPS_NS::PairAIREBO::FLJ(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:813:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair = dC*dwij / rij;
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:857:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:852:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:852:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:857:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:828:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:824:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkjS / rikS;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:847:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:852:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:857:45: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:852:45: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:828:40: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair2 = dC*wikS*dwkjS / rkjS;
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:847:45: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
           fpair1 = dC*dwikS*wkmS*wmjS / rikS;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:883:76: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
             v_tally4(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS);
                                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_airebo.cpp:883:76: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:2314:44: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
             {com6+=prefac_ij2*pcrossk*dfc_k;}
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:1799:48: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
      prady  += 1.0 *  btor[2] * bbtor * att_eng;
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:1798:48: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp: In member function 'double LAMMPS_NS::PairBOP::sigmaBo(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:3753:52: warning: 'xtmp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                   ,ftmp[2],xtmp[0],xtmp[1],xtmp[2]);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:3753:52: warning: 'xtmp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:3753:52: warning: 'xtmp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1763:42: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1763:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1764:35: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1775:51: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:1500:38: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
             bt_sg[nb_jk].temp=temp_jk;
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_bop.cpp:3641:30: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
               else if(temp_kk==temp_ji&&setting==0) {
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp: In member function 'void LAMMPS_NS::PairComb3::direct(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, int, int, int, double, double, double, double, double, double, double, double, double&, double&, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:2804:20: warning: 'dcurlji' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1n += dcurlji*iq*(afbn-fafbnl)*esucon/r;
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_comb3.cpp:2807:20: warning: 'dcurlij' may be used uninitialized in this function [-Wmaybe-uninitialized]
    smf1j += dcurlij*jq*(afbj-fafbnl)*esucon/r;
                    ^
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp: In member function 'virtual void LAMMPS_NS::PairEAM::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp:470:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp:471:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp:473:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp: In member function 'void LAMMPS_NS::PairEAM::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam.cpp:788:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloy::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:143:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:168:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:192:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFS::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:140:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:141:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:142:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:143:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:168:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:194:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_alloy.cpp:205:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eam_fs.cpp:210:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp: In member function 'int LAMMPS_NS::PairEIM::grabpair(FILE*, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp:971:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_eim.cpp:975:35: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(line,MAXLINE,fptr);
                                   ^
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw_zbl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_gw_zbl.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_nb3b_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_nb3b_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_nb3b_harmonic.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp: In member function 'void LAMMPS_NS::PairLCBOP::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:986:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:992:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:993:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:994:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&gamma_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:995:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&A);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:996:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:997:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&B_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:998:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&alpha);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:999:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1000:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&beta_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1001:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&d);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1002:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1003:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_4);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1004:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&C_6);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1005:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&L);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1006:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&kappa);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1007:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_0);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1008:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&R_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1009:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_0);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1010:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_1_LR);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1011:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&r_2_LR);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1012:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1013:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&v_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1014:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1015:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1016:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_1);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1017:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&lambda_2);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1018:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&eps);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1019:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);    sscanf(s,"%lg",&delta);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1022:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1031:30: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(s,MAXLINE,fp);
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1038:40: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
         while (1) { fgets(s,MAXLINE,fp); if (s[0] != '#') break; }
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1045:24: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(s,MAXLINE,fp);
                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_lcbop.cpp:1051:26: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(s,MAXLINE,fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:579:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:580:60: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     while (line == strchr(line,'#')) fgets(line,MAXLINE,fp);
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:596:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:614:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:650:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fp);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'void LAMMPS_NS::PairPolymorphic::grab(FILE*, int, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:881:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_rebo.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_rebo.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_rebo.cpp
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_sw.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_sw.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_sw.cpp
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp: In member function 'virtual void LAMMPS_NS::PairPolymorphic::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:262:7: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (emb > epsilon) {
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:290:82: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
                                                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:290:82: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_polymorphic.cpp:290:82: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff_mod.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MANYBODY/pair_tersoff_mod.cpp
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_atom_swap.cpp: In member function 'int LAMMPS_NS::FixAtomSwap::attempt_semi_grand()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_atom_swap.cpp:391:54: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
         atom->v[i][0] *= sqrt_mass_ratio[itype][jtype];
                                                      ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_gcmc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_gcmc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_gcmc.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_tfmc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_tfmc.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp: In member function 'virtual void LAMMPS_NS::FixBondSwap::post_integrate()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:629:44: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jlast]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:607:44: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jangle = 0; jangle < num_angle[jprev]; jangle++) {
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:202:25: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:618:44: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (iangle = 0; iangle < num_angle[ilast]; iangle++) {
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:491:39: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (iprev >= 0) iprevtag = tag[iprev];
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:202:7: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int inext,iprev,ilast,jnext,jprev,jlast,ibond,iangle,jbond,jangle;
       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:414:53: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jnextangletype,i,jnext,jlast) +
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:419:49: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(jangletype,jprev,j,jnext) -
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:418:53: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               angle_eng(inextangletype,i,inext,ilast) -
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:413:56: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             delta += angle_eng(iangletype,iprev,i,jnext) +
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/fix_bond_swap.cpp:457:37: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
   for (jbond = 0; jbond < num_bond[j]; jbond++)
                                     ^
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MEAM/pair_meam.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MEAM/pair_meam.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MEAM/pair_meam.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:350:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:354:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:355:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp: In member function 'virtual void LAMMPS_NS::PairDSMC::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:383:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:384:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&max_cell_size,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:385:34: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&seed,sizeof(int),1,fp);
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:386:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MC/pair_dsmc.cpp:387:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_msd_nongauss.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_msd_nongauss.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_ti.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/compute_ti.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'int sizeofint(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:559:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (size >= num && num_of_bits < 32) {
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'int sizeofints(int, unsigned int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:600:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   while (bytes[num_of_bytes] >= num) {
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'void sendints(int*, int, int, unsigned int*, unsigned int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:654:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if (num_of_bits >= num_of_bytes * 8) {
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:655:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes; i++) {
                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:660:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (i = 0; i < num_of_bytes-1; i++) {
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'int receivebits(int*, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:695:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if (lastbits < num_of_bits) {
                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp: In function 'int xdr3dfcoord(XDR*, float*, int*, float*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:397:54: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define LASTIDX (sizeof(magicints) / sizeof(int) - 1 )
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:935:23: note: in expansion of macro 'LASTIDX'
     while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:46:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:939:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:46:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 #define MYMIN(a,b) ((a) < (b) ? (a) : (b))
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:1115:14: note: in expansion of macro 'MYMIN'
     maxidx = MYMIN(LASTIDX, smallidx + 8) ;
              ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_efield.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_efield.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_efield.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:1141:54: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[2] = receivebits(buf, bitsizeint[2]);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:1140:54: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[1] = receivebits(buf, bitsizeint[1]);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/dump_xtc.cpp:1139:54: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
         thiscoord[0] = receivebits(buf, bitsizeint[0]);
                                                      ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp: In member function 'virtual void LAMMPS_NS::FixDeposit::pre_exchange()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_deposit.cpp:530:56: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else atom->avec->create_atom(ntype+onemols[imol]->type[m],coords[m]);
                                                        ^
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_gld.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_gld.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_oneway.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_oneway.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_oneway.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp: In member function 'virtual void LAMMPS_NS::FixEvaporate::pre_exchange()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_evaporate.cpp:324:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
         } else if (me == proc && i == iatom) {
                               ^
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_orient_bcc.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/fix_orient_fcc.cpp.o
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:329:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:333:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:334:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:335:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:336:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:337:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:367:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_global,sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:368:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:369:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut.cpp:370:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:381:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:385:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:386:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:387:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:388:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:389:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:390:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_coul[i][j],sizeof(double),1,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:422:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:423:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_global,sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:424:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:425:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:426:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:486:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:151:58: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0n[itype][jtype]*rninv -
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_cut.cpp:153:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                         r0m[itype][jtype]*rminv) -
                                                          ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/xdr_compat.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/xdr_compat.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:427:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:431:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&e0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:432:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&r0[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:433:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&nn[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:434:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&mm[i][j],sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:435:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:468:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:469:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:470:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:471:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:472:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:473:44: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&ncoultablebits,sizeof(int),1,fp);
                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:474:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabinner,sizeof(double),1,fp);
                                         ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual double LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:560:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:560:40: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
       table = etable[itable] + fraction*detable[itable];
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:563:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:558:31: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
       phicoul = prefactor*erfc;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:570:65: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
                                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'virtual void LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:187:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:192:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:197:50: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:198:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:189:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MISC/pair_nm_cut_coul_long.cpp:189:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_delta.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_delta.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_delta.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp: In member function 'virtual void LAMMPS_NS::AngleCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp:249:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp:250:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp:251:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_charmm.cpp:252:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r_ub[1],sizeof(double),atom->nangletypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp: In member function 'virtual void LAMMPS_NS::AngleCosine::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine.cpp:197:70: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   if (comm->me == 0) fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                                      ^
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp: In member function 'virtual void LAMMPS_NS::AngleCosinePeriodic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp:250:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp:251:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b[1],sizeof(int),atom->nangletypes,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_periodic.cpp:252:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nangletypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp: In member function 'virtual void LAMMPS_NS::AngleCosineSquared::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp:215:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_cosine_squared.cpp:216:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp: In member function 'virtual void LAMMPS_NS::AngleHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp:215:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nangletypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_harmonic.cpp:216:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&theta0[1],sizeof(double),atom->nangletypes,fp);
                                                          ^
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_angle.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_angle.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_angle.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp: In member function 'virtual void LAMMPS_NS::AngleTable::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:292:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:293:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp: In member function 'void LAMMPS_NS::AngleTable::read_table(LAMMPS_NS::AngleTable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:385:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:387:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:388:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:394:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:403:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/angle_table.cpp:405:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_bond.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_bond.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_bond.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_full.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_full.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_full.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_molecular.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_molecular.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_molecular.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_template.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_template.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/atom_vec_template.cpp
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp: In member function 'virtual void LAMMPS_NS::BondFENE::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp:220:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp:221:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp:222:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene.cpp:223:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp: In member function 'virtual void LAMMPS_NS::BondFENEExpand::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:229:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:230:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:231:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:232:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sigma[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_fene_expand.cpp:233:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp: In member function 'virtual void LAMMPS_NS::BondGromos::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp:172:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_gromos.cpp:173:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp.o
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp: In member function 'virtual void LAMMPS_NS::BondHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp:172:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_harmonic.cpp:173:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp: In member function 'virtual void LAMMPS_NS::BondMorse::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp:176:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&d0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp:177:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&alpha[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_morse.cpp:178:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp: In member function 'virtual void LAMMPS_NS::BondNonlinear::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp:171:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&epsilon[1],sizeof(double),atom->nbondtypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp:172:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&r0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_nonlinear.cpp:173:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&lamda[1],sizeof(double),atom->nbondtypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp: In member function 'virtual void LAMMPS_NS::BondQuartic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:281:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nbondtypes,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:282:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b1[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:283:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&b2[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:284:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&rc[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_quartic.cpp:285:53: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&u0[1],sizeof(double),atom->nbondtypes,fp);
                                                     ^
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp: In member function 'virtual void LAMMPS_NS::BondTable::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:236:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tabstyle,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:237:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tablength,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp: In member function 'void LAMMPS_NS::BondTable::read_table(LAMMPS_NS::BondTable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:314:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);                         // no match, skip section
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:316:27: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fp);
                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:317:64: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:323:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/bond_table.cpp:335:25: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(line,MAXLINE,fp);
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:429:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:430:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:431:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:432:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmm.cpp:433:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp: In member function 'virtual void LAMMPS_NS::DihedralCharmmfsw::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:472:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:473:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:474:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&shift[1],sizeof(int),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:475:61: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weight[1],sizeof(double),atom->ndihedraltypes,fp);
                                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_charmmfsw.cpp:476:40: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&weightflag,sizeof(int),1,fp);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp:333:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp:334:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->ndihedraltypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_harmonic.cpp:335:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->ndihedraltypes,fp);
                                                                ^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp: In member function 'virtual void LAMMPS_NS::DihedralHelix::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp:325:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&aphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp:326:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&bphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_helix.cpp:327:59: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cphi[1],sizeof(double),atom->ndihedraltypes,fp);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp: In member function 'virtual void LAMMPS_NS::DihedralMultiHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:320:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:323:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_multi_harmonic.cpp:324:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&a5[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp: In member function 'virtual void LAMMPS_NS::DihedralOPLS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp:335:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k1[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp:336:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k2[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp:337:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k3[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/dihedral_opls.cpp:338:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k4[1],sizeof(double),atom->ndihedraltypes,fp);
                                                         ^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:339:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:340:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&sign[1],sizeof(int),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:341:64: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&multiplicity[1],sizeof(int),atom->nimpropertypes,fp);
                                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp: In member function 'virtual void LAMMPS_NS::ImproperCvff::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:209:15: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
       pd = -pd;
               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_cvff.cpp:208:18: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
       p = 2.0 - p;
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp: In member function 'virtual void LAMMPS_NS::ImproperHarmonic::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp:280:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&k[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_harmonic.cpp:281:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&chi[1],sizeof(double),atom->nimpropertypes,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp: In member function 'virtual void LAMMPS_NS::ImproperUmbrella::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp:321:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&kw[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp:322:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&w0[1],sizeof(double),atom->nimpropertypes,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/improper_umbrella.cpp:323:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&C[1],sizeof(double),atom->nimpropertypes,fp);
                                                        ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp: In member function 'double LAMMPS_NS::FixCMAP::dihedral_angle_atan2(double, double, double, double, double, double, double, double, double, double)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/fix_cmap.cpp:958:10: warning: 'angle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return angle;
          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:379:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:383:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:384:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:385:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&eps14[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:386:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma14[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:440:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:441:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:442:47: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul_inner,sizeof(double),1,fp);
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:443:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:444:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:445:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:302:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:502:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:168:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:153:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingMorse::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:123:45: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
         else k = atom->map(klist[kk]+tagprev);
                                             ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingLJ::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:512:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp: In member function 'virtual double LAMMPS_NS::PairHbondDreidingMorse::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_morse.cpp:415:41: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
     else k = atom->map(klist[kk]+tagprev);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp: In member function 'virtual void LAMMPS_NS::PairHbondDreidingLJ::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_hbond_dreiding_lj.cpp:375:9: warning: 'donor_flag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (donor_flag == 0) type2param[i][j][k] = nparams;
         ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:201:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                              ^
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:134:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:134:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/atom_vec_peri.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/atom_vec_peri.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:437:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:441:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&epsilon[i][j],sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:442:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&sigma[i][j],sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:443:43: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&eps14[i][j],sizeof(double),1,fp);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:444:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
    fread(&sigma14[i][j],sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:474:45: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_inner,sizeof(double),1,fp);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:475:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj,sizeof(double),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:476:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:477:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:478:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual double LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:534:34: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
       philj6 = -lj4[itype][jtype]*r6inv + 
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:529:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:621:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:625:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&epsilon[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:626:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&sigma[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:627:51: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut_lj[i][j],sizeof(double),1,fp);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:663:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:664:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:665:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:666:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:667:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:669:46: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_lj_global,sizeof(double),1,fp);
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:670:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:671:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&offset_flag,sizeof(int),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:672:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&mix_flag,sizeof(int),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:673:39: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&tail_flag,sizeof(int),1,fp);
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:196:42: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl6 = -lj4[itype][jtype]*r6inv + 
                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:194:47: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
               evdwl12 = r6inv*lj3[itype][jtype]*r6inv - 
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:480:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:507:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeO,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:508:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeH,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:509:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeB,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:510:35: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&typeA,sizeof(int),1,fp);
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:511:38: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&qdist,sizeof(double),1,fp);
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:513:41: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fread(&cut_coul,sizeof(double),1,fp);
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:338:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:337:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:265:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_tip4p_cut.cpp:261:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_damage_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_damage_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'virtual void LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:378:29: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH2;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:29: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             vlist[n++] = jH1;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:305:18: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH2][0] += fH[0];
                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:301:18: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
             f[iH1][0] += fH[0];
                  ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_plasticity_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_plasticity_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp: In member function 'virtual void LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/compute_dilatation_atom.cpp:106:11: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
   double *theta;
           ^
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/fix_peri_neigh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/fix_peri_neigh.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriEPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:570:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:574:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:575:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:576:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:577:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:578:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_eps.cpp:579:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_yieldstress[i][j],sizeof(double),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp: In member function 'virtual void LAMMPS_NS::PairPeriLPS::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:495:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:499:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:500:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:501:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:502:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_lps.cpp:503:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp: In member function 'virtual void LAMMPS_NS::PairPeriPMB::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:424:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:428:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&kspring[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:429:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:430:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_pmb.cpp:431:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_dynamic.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_dynamic.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_dynamic.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_fire.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_fire.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_fire.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp: In member function 'virtual void LAMMPS_NS::PairPeriVES::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:552:58: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:556:56: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&bulkmodulus[i][j],sizeof(double),1,fp);
                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:557:57: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&shearmodulus[i][j],sizeof(double),1,fp);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:558:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&s00[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:559:50: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&alpha[i][j],sizeof(double),1,fp);
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:560:48: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&cut[i][j],sizeof(double),1,fp);
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:561:54: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_lambdai[i][j],sizeof(double),1,fp);
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PERI/pair_peri_ves.cpp:562:52: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fread(&m_taubi[i][j],sizeof(double),1,fp);
                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp: In member function 'virtual int LAMMPS_NS::FixQEq::pack_forward_comm(int, int*, double*, int, int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq.cpp:486:10: warning: 'm' may be used uninitialized in this function [-Wmaybe-uninitialized]
   return m;
          ^
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_point.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_point.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_point.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_shielded.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/QEQ/fix_qeq_slater.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/fix_reax_bonds.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/fix_reax_bonds.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/fix_reax_bonds.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/compute_event_displace.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp: In member function 'virtual void LAMMPS_NS::PairREAX::compute(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp:177:30: warning: statement has no effect [-Wunused-value]
   FORTRAN(cbkabo, CBKABO).abo;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp: In member function 'void LAMMPS_NS::PairREAX::cg_solve(const int&, const int&, double*, int*, int*, double*, double*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REAX/pair_reax.cpp:946:15: warning: variable 'zero' set but not used [-Wunused-but-set-variable]
   double one, zero, rho, rho_old, alpha, beta, gamma;
               ^
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_event.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/neb.cpp: In member function 'void LAMMPS_NS::NEB::run()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/neb.cpp:306:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (uscreen)
        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/neb.cpp:320:8: warning: suggest explicit braces to avoid ambiguous 'else' [-Wparentheses]
     if (ulogfile)
        ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/temper.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/temper.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/temper.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp: In member function 'virtual void LAMMPS_NS::FixNEB::min_post_force(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp:612:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp:612:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/fix_neb.cpp:612:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
                                                          ^
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/verlet_split.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/verlet_split.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/REPLICA/verlet_split.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/compute_erotate_rigid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/compute_erotate_rigid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/compute_erotate_rigid.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/compute_ke_rigid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/compute_ke_rigid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/compute_ke_rigid.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/compute_rigid_local.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_ehex.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_ehex.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_ehex.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rattle.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rattle.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rattle.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_ehex.cpp: In member function 'virtual void LAMMPS_NS::FixEHEX::init()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_ehex.cpp:203:48: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
      fshake = ((FixShake*) modify->fix[id_shake]);
                                                ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nh_small.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In constructor 'LAMMPS_NS::FixRigid::FixRigid(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:579:51: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + me);
                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:396:30: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][2] = zflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:395:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:394:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         tflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:358:34: warning: 'zflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (domain->dimension == 2 && zflag == 1.0)
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:364:30: warning: 'yflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][1] = yflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:363:30: warning: 'xflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fflag[m-1][0] = xflag;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:224:32: warning: 'molecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (custom_flag) delete [] molecule;
                                ^
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nph_small.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_npt_small.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nve_small.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_xv()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1442:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1437:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1421:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1365:50: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1364:60: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1364:50: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
                                                  ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_nvt_small.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_shake.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_shake.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_shake.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::set_v()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1587:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1574:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1536:40: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x1 = x[i][1] + ybox*yprd + zbox*yz;
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1535:50: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1535:40: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
                                        ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_append_atoms.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_append_atoms.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_append_atoms.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2183:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, LAMMPS_NS::imageint*, int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2256:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp: In member function 'void LAMMPS_NS::FixRigid::setup_bodies_static()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2082:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (infile && inbody[ibody]) continue;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2063:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:1980:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid.cpp:2045:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_msst.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_msst.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_nphug.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_nphug.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'virtual void LAMMPS_NS::FixRigidSmall::write_restart_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2665:26: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (me == 0) fclose(fp);
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_xv()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1327:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1322:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         lbonus[line[i]].theta = theta;
                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1307:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SHOCK/fix_wall_piston.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::set_v()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1465:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:1452:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2385:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           radone = lbonus[line[i]].length;
                                  ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_sna_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_sna_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_sna_atom.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snad_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snad_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snad_atom.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In constructor 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:492:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
   if (langflag) random = new RanMars(lmp,seed + comm->me);
                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2471:67: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
                                                                   ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snav_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snav_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/compute_snav_atom.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp: In member function 'void LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2269:31: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (infile && inbody[ibody]) continue;
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2247:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         inertiaatom = tbonus[tri[i]].inertia;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2162:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         orient[i][0] = lbonus[line[i]].theta - theta_body;
                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/RIGID/fix_rigid_small.cpp:2229:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
         shape = ebonus[ellipsoid[i]].shape;
                                    ^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/sna.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/sna.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/sna.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp: In constructor 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_wall_srd.cpp:67:33: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
       wallwhich[nwall] = newwall;
                                 ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp: In member function 'void LAMMPS_NS::PairSNAP::compute_optimized(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp:724:53: warning: 'endtime' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (time_guided) schedule_time_guided = endtime - starttime;
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp:477:9: warning: 'ielem' may be used uninitialized in this function [-Wmaybe-uninitialized]
     int ielem;
         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SNAP/pair_snap.cpp:724:53: warning: 'starttime' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (time_guided) schedule_time_guided = endtime - starttime;
                                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp:91:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_invoke.cpp:108:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
              ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/pair_python.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/pair_python.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/pair_python.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_static()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2968:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       c1 = tbonus[tri[i]].c1;
                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2956:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       length = lbonus[line[i]].length;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2940:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::big_dynamic()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:3051:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       inertia = tbonus[tri[i]].inertia;
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:3038:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       biglist[k].theta = lbonus[line[i]].theta;
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:3026:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
       shape = ebonus[ellipsoid[i]].shape;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:146:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_init, NULL);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:164:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:182:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate, NULL);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:200:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:219:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/fix_python_move.cpp:237:14: warning: unused variable 'result' [-Wunused-variable]
   PyObject * result = PyEval_CallObject(py_reset_dt, NULL);
              ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::reset_velocities()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1019:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
                                 ^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/fix_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/fix_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/fix_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::parameterize()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2685:37: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *c1 = tbonus[tri[i]].c1;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2705:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double length = lbonus[line[i]].length;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:2702:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
           double *shape = ebonus[ellipsoid[i]].shape;
                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp: In member function 'int LAMMPS_NS::PythonImpl::create_entry(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp:410:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   else if (format && strlen(format) != ninput+noutput)
                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp: In member function 'virtual void LAMMPS_NS::PythonImpl::invoke_function(int, char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/PYTHON/python_impl.cpp:320:36: warning: 'pValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
     PyTuple_SetItem(pArgs,i,pValue);
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp: In member function 'void LAMMPS_NS::ComputeVoronoi::processCell(voro::voronoicell_neighbor&, int)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp:515:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for (j=0; j<narea.size(); ++j)
                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp:530:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp:547:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
         for( j=0; j<vlist.size(); j+=vlist[j]+1 ) {
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/VORONOI/compute_voronoi_atom.cpp:591:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if (neighs != narea.size())
                                ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pppm_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pppm_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pppm_gpu.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp: In member function 'void LAMMPS_NS::FixSRD::collisions_multi()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1550:33: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[2] = xbcollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1549:33: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[1] = xbcollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1548:33: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xbcoll[0] = xbcollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1547:33: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[2] = xscollfirst[2];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1546:33: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[1] = xscollfirst[1];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1545:33: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       xscoll[0] = xscollfirst[0];
                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1553:29: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[2] = normfirst[2];
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1552:29: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[1] = normfirst[1];
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1551:29: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
       norm[0] = normfirst[0];
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1578:32: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (collidestyle == SLIP && type == SPHERE)
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/SRD/fix_srd.cpp:1583:33: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
         force_wall(v[i],vsnew,j);
                                 ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp: In member function 'void LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_beck_gpu.cpp:240:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp: In member function 'void LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_gpu.cpp:242:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp:282:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp:279:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp:279:72: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_wolf_gpu.cpp:283:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                              ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_debye_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_dsf_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp:250:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_cut_gpu.cpp:250:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_tstat_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_tstat_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_tstat_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp: In member function 'void LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_dpd_gpu.cpp:406:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp: In member function 'void LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gauss_gpu.cpp:231:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj96_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp:234:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp:231:74: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
                                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cubic_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_gpu.cpp:237:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:249:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:253:72: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:253:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:256:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                        ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:284:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:270:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:283:43: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp: In member function 'void LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_expand_gpu.cpp:239:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'void LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp:236:71: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
                                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_gromacs_gpu.cpp:242:74: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_mie_cut_gpu.cpp:226:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp: In member function 'void LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_morse_gpu.cpp:222:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp: In member function 'void LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp:233:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp:225:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp: In member function 'void LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp:334:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                                                 ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp:334:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp:331:45: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = tb->e[itable] + fraction*tb->de[itable];
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp:339:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp: In member function 'void LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp:233:59: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp:238:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp: In member function 'void LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp:335:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp:338:63: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       -r12[0],-r12[1],-r12[2]);
                                                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp: In member function 'void LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp:310:45: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (eflag) evdwl = factor_lj*one_eng;
                                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp:313:73: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
                                       fforce[2],-r12[0],-r12[1],-r12[2]);
                                                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp:223:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:273:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:274:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:277:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp:277:45: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
                                             ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp:236:68: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
                                                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp: In member function 'void LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp:302:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
       f[i][2] += delz*fpair;
                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp:298:36: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (eflag) evdwl *= factor_lj;
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:355:34: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                                  ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:353:35: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += -q[j]*r3inv*pidotr;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:29: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:351:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
                                         ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:355:28: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul += qtmp*r3inv*pjdotr;
                            ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:360:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp:283:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp:284:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp:288:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp:287:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
                                    ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairCoulLongGPU::init_style()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:151:16: warning: unused variable 'cut' [-Wunused-variable]
         double cut = init_one(i,j);
                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp:275:35: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
             ecoul = prefactor*erfc;
                                   ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp:276:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp:280:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                                           ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp:280:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairLJCharmmCoulLongGPU::init_style()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:154:10: warning: variable 'cut' set but not used [-Wunused-but-set-variable]
   double cut;
          ^
[ 98%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:282:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:287:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:284:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp:284:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:319:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:324:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:328:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:321:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:321:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:328:44: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
                                            ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:306:37: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*erfc;
                                     ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:311:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:315:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:308:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp:308:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'void LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:283:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
                                                              ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:278:39: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
               ecoul = prefactor*egamma;
                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:287:26: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
                          ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:48: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                                ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
                                                                      ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:70: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:280:36: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
               table = etable[itable] + fraction*detable[itable];
                                    ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:380:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:405:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:425:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_sw_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_gpu.cpp
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:377:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:378:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:379:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:380:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:405:29: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(line,MAXLINE,fptr);
                             ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:427:31: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
       fgets(line,MAXLINE,fptr);
                               ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp:432:55: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if (me == 0) grab(fptr,file->nr,&file->rhor[i][1]);
                                                       ^
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp:443:59: warning: 'fptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if (me == 0) grab(fptr,file->nr,&file->z2r[i][j][1]);
                                                           ^
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_mod_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_mod_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_mod_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o
/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIC   -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_zbl_gpu.cpp
[ 99%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp.o
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/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairVashishtaGPU::init_style()':
/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp:154:24: warning: unused variable 'r0eps' [-Wunused-variable]
   double *cutsq, *r0, *r0eps, *gamma, *eta;
                        ^
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CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_soft_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_table_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_zbl_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_gayberne_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_resquared_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_colloid_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_yukawa_colloid_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_born_coul_long_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_buck_coul_long_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_coul_long_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_alloy_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_eam_fs_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_sw_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_mod_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_tersoff_zbl_gpu.cpp.o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/GPU/pair_vashishta_gpu.cpp.o libmpi_stubs.a -lfftw3 -lpython3.4m -ljpeg -lpng -lz -lz -lvoro++ -lm libreax.a libmeam.a libgpu.a -lOpenCL -lgfortran 
/usr/bin/cmake3 -E cmake_symlink_library liblammps.so.0 liblammps.so.0 liblammps.so
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
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make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/serial && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/serial /builddir/build/BUILD/lammps-patch_17Jan2018/serial /builddir/build/BUILD/lammps-patch_17Jan2018/serial/CMakeFiles/lmp.dir/DependInfo.cmake --color=
Scanning dependencies of target lmp
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/usr/bin/c++   -DFFT_FFTW3 -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLAMMPS_XDR -DLMP_PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/STUBS -I/usr/include/python3.4m -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/ASPHERE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/BODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CLASS2 -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COLLOID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/COMPRESS -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/CORESHELL -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/DIPOLE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GRANULAR -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/KSPACE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MANYBODY -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MEAM -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MISC -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/MOLECULE -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PERI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/QEQ -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REAX -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/REPLICA -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/RIGID -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SHOCK -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SNAP -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/SRD -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/PYTHON -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/VORONOI -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src/GPU -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../src -I/builddir/build/BUILD/lammps-patch_17Jan2018/serial/styles -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/reax -I/builddir/build/BUILD/lammps-patch_17Jan2018/cmake/../lib/meam  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard  -fPIE   -o CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/main.cpp.o -c /builddir/build/BUILD/lammps-patch_17Jan2018/src/main.cpp
[100%] Linking CXX executable lmp
/usr/bin/cmake3 -E cmake_link_script CMakeFiles/lmp.dir/link.txt --verbose=1
/usr/bin/c++   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard    -Wl,-z,relro  CMakeFiles/lmp.dir/builddir/build/BUILD/lammps-patch_17Jan2018/src/main.cpp.o  -o lmp -rdynamic liblammps.so.0 libmpi_stubs.a -lfftw3 -lpython3.4m -ljpeg -lpng -lz -lvoro++ -lm libreax.a libmeam.a libgpu.a -lOpenCL -lgfortran -Wl,-rpath,/builddir/build/BUILD/lammps-patch_17Jan2018/serial: 
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/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-patch_17Jan2018/serial/CMakeFiles 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.sarMF6
+ cd ..
+ exit 0
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm
++ dirname /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm
+ cd lammps-patch_17Jan2018
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm -C serial
make: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
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make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
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Install the project...
/usr/bin/cmake3 -P cmake_install.cmake
-- Install configuration: ""
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/python3.4/site-packages/lammps.py
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/liblammps.so.0
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/liblammps.so
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/include/lammps/library.h
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/pkgconfig/liblammps.pc
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/bin/lmp
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/bin/lmp" to ""
make: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm -C mpich
make: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
/usr/bin/cmake3 -H/builddir/build/BUILD/lammps-patch_17Jan2018/cmake -B/builddir/build/BUILD/lammps-patch_17Jan2018/mpich --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/CMakeFiles /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
make[1]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
/usr/bin/make -f CMakeFiles/reax.dir/build.make CMakeFiles/reax.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/mpich /builddir/build/BUILD/lammps-patch_17Jan2018/mpich /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/CMakeFiles/reax.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
/usr/bin/make -f CMakeFiles/reax.dir/build.make CMakeFiles/reax.dir/requires
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
make[2]: Nothing to be done for `CMakeFiles/reax.dir/requires'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
/usr/bin/make -f CMakeFiles/reax.dir/build.make CMakeFiles/reax.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
make[2]: Nothing to be done for `CMakeFiles/reax.dir/build'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
[  1%] Built target reax
/usr/bin/make -f CMakeFiles/meam.dir/build.make CMakeFiles/meam.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/mpich /builddir/build/BUILD/lammps-patch_17Jan2018/mpich /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/CMakeFiles/meam.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
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make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
/usr/bin/make -f CMakeFiles/meam.dir/build.make CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_data.F.o.provides.build
make[3]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
make[3]: `CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_data.F.o.provides.build' is up to date.
make[3]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
/usr/bin/make -f CMakeFiles/meam.dir/build.make CMakeFiles/meam.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
make[2]: Nothing to be done for `CMakeFiles/meam.dir/build'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
[  2%] Built target meam
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/mpich /builddir/build/BUILD/lammps-patch_17Jan2018/mpich /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/CMakeFiles/gpu.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
make[2]: Nothing to be done for `CMakeFiles/gpu.dir/build'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
[ 15%] Built target gpu
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/mpich /builddir/build/BUILD/lammps-patch_17Jan2018/mpich /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/CMakeFiles/lammps.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
make[2]: Nothing to be done for `CMakeFiles/lammps.dir/build'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
[ 99%] Built target lammps
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/mpich /builddir/build/BUILD/lammps-patch_17Jan2018/mpich /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/CMakeFiles/lmp.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
make[2]: Nothing to be done for `CMakeFiles/lmp.dir/build'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
[ 99%] Built target lmp
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/mpich && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/mpich /builddir/build/BUILD/lammps-patch_17Jan2018/mpich /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
make[2]: Nothing to be done for `CMakeFiles/ocl_get_devices.dir/build'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
[100%] Built target ocl_get_devices
make[1]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-patch_17Jan2018/mpich/CMakeFiles 0
/usr/bin/make -f CMakeFiles/Makefile2 preinstall
make[1]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
make[1]: Nothing to be done for `preinstall'.
make[1]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
Install the project...
/usr/bin/cmake3 -P cmake_install.cmake
-- Install configuration: ""
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/python3.4/site-packages/lammps.py
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/mpich/lib/liblammps.so.0
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/mpich/lib/liblammps.so
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/mpich/lib/liblammps.so.0" to ""
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/include/lammps/library.h
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/mpich/lib/pkgconfig/liblammps.pc
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/mpich/bin/lmp
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/mpich/bin/lmp" to ""
make: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm -C openmpi
make: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/cmake3 -H/builddir/build/BUILD/lammps-patch_17Jan2018/cmake -B/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles/progress.marks
/usr/bin/make -f CMakeFiles/Makefile2 all
make[1]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/make -f CMakeFiles/reax.dir/build.make CMakeFiles/reax.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles/reax.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/make -f CMakeFiles/reax.dir/build.make CMakeFiles/reax.dir/requires
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
make[2]: Nothing to be done for `CMakeFiles/reax.dir/requires'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/make -f CMakeFiles/reax.dir/build.make CMakeFiles/reax.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
make[2]: Nothing to be done for `CMakeFiles/reax.dir/build'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
[  1%] Built target reax
/usr/bin/make -f CMakeFiles/meam.dir/build.make CMakeFiles/meam.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles/meam.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/make -f CMakeFiles/meam.dir/build.make CMakeFiles/meam.dir/requires
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/make -f CMakeFiles/meam.dir/build.make CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_data.F.o.provides.build
make[3]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
make[3]: `CMakeFiles/meam.dir/builddir/build/BUILD/lammps-patch_17Jan2018/lib/meam/meam_data.F.o.provides.build' is up to date.
make[3]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/make -f CMakeFiles/meam.dir/build.make CMakeFiles/meam.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
make[2]: Nothing to be done for `CMakeFiles/meam.dir/build'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
[  2%] Built target meam
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles/gpu.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/make -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
make[2]: Nothing to be done for `CMakeFiles/gpu.dir/build'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
[ 15%] Built target gpu
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles/lammps.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/make -f CMakeFiles/lammps.dir/build.make CMakeFiles/lammps.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
make[2]: Nothing to be done for `CMakeFiles/lammps.dir/build'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
[ 99%] Built target lammps
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles/lmp.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/make -f CMakeFiles/lmp.dir/build.make CMakeFiles/lmp.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
make[2]: Nothing to be done for `CMakeFiles/lmp.dir/build'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
[ 99%] Built target lmp
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
cd /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi && /usr/bin/cmake3 -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/cmake /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/make -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
make[2]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
make[2]: Nothing to be done for `CMakeFiles/ocl_get_devices.dir/build'.
make[2]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
[100%] Built target ocl_get_devices
make[1]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
/usr/bin/cmake3 -E cmake_progress_start /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi/CMakeFiles 0
/usr/bin/make -f CMakeFiles/Makefile2 preinstall
make[1]: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
make[1]: Nothing to be done for `preinstall'.
make[1]: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
Install the project...
/usr/bin/cmake3 -P cmake_install.cmake
-- Install configuration: ""
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/python3.4/site-packages/lammps.py
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/openmpi/lib/liblammps.so.0
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/openmpi/lib/liblammps.so
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/openmpi/lib/liblammps.so.0" to ""
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/include/lammps/library.h
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/openmpi/lib/pkgconfig/liblammps.pc
-- Installing: /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/openmpi/bin/lmp
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/openmpi/bin/lmp" to ""
make: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
+ /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 /builddir/build/BUILD/lammps-patch_17Jan2018
extracting debug info from /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/bin/lmp
extracting debug info from /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/liblammps.so.0
extracting debug info from /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/openmpi/bin/lmp
extracting debug info from /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/openmpi/lib/liblammps.so.0
extracting debug info from /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/mpich/bin/lmp
extracting debug info from /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/mpich/lib/liblammps.so.0
/usr/lib/rpm/sepdebugcrcfix: Updated 6 CRC32s, 0 CRC32s did match.
symlinked /usr/lib/debug/usr/lib/liblammps.so.0.debug to /usr/lib/debug/usr/lib/liblammps.so.debug
symlinked /usr/lib/debug/usr/lib/openmpi/lib/liblammps.so.0.debug to /usr/lib/debug/usr/lib/openmpi/lib/liblammps.so.debug
symlinked /usr/lib/debug/usr/lib/mpich/lib/liblammps.so.0.debug to /usr/lib/debug/usr/lib/mpich/lib/liblammps.so.debug
39175 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1
Bytecompiling .py files below /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/lib/python3.4 using /usr/bin/python3.4
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-java-repack-jars
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.SW32hu
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_17Jan2018
+ make -C serial -j4 test
make: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
Running tests...
/usr/bin/ctest3 --force-new-ctest-process 
Test project /builddir/build/BUILD/lammps-patch_17Jan2018/serial
    Start 1: ShowHelp
1/1 Test #1: ShowHelp .........................   Passed    0.09 sec
100% tests passed, 0 tests failed out of 1
Total Test time (real) =   0.10 sec
make: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/serial'
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 31851 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module load mpi/mpich-arm
++ /usr/bin/modulecmd sh load mpi/mpich-arm
+ eval LD_LIBRARY_PATH=/usr/lib/mpich/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/mpich-arm' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/mpich/bin' ';export' 'MPI_BIN;MPI_COMPILER=mpich-arm' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/mpich-arm' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/mpich' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/mpich-arm' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/mpich/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/mpich' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_mpich' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/mpich-arm' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib/mpich/lib/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/mpich' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/mpich-arm' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib/mpich/lib
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=mpi/mpich-arm
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/mpich:/usr/share/man:/usr/local/share/man
++ export MANPATH
++ MPI_BIN=/usr/lib/mpich/bin
++ export MPI_BIN
++ MPI_COMPILER=mpich-arm
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/mpich-arm
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib/mpich
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/mpich-arm
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib/mpich/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/mpich
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/mpich
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/mpich-arm
++ export MPI_SYSCONFIG
++ PATH=/usr/lib/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PKG_CONFIG_PATH=/usr/lib/mpich/lib/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ PYTHONPATH=/usr/lib/python2.7/site-packages/mpich
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/mpi/mpich-arm
++ export _LMFILES_
+ export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ make -C mpich -j4 test
make: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
Running tests...
/usr/bin/ctest3 --force-new-ctest-process 
Test project /builddir/build/BUILD/lammps-patch_17Jan2018/mpich
    Start 1: ShowHelp
1/1 Test #1: ShowHelp .........................   Passed    0.13 sec
100% tests passed, 0 tests failed out of 1
Total Test time (real) =   0.15 sec
make: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/mpich'
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 31851 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' mpi/mpich-arm = '' ']'
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module unload mpi/mpich-arm
++ /usr/bin/modulecmd sh unload mpi/mpich-arm
+ eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PKG_CONFIG_PATH=/usr/lib/pkgconfig:/usr/share/pkgconfig' ';export' 'PKG_CONFIG_PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;'
++ MANPATH=/usr/share/man:/usr/local/share/man
++ export MANPATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PKG_CONFIG_PATH=/usr/lib/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset LD_LIBRARY_PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset PYTHONPATH
++ unset _LMFILES_
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 31851 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module load mpi/openmpi-arm
++ /usr/bin/modulecmd sh load mpi/openmpi-arm
+ eval LD_LIBRARY_PATH=/usr/lib/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-arm' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-arm:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-arm' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-arm' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-arm' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-arm' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-arm' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-arm' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib/openmpi/lib
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=mpi/openmpi-arm
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/openmpi-arm:/usr/share/man:/usr/local/share/man
++ export MANPATH
++ MPI_BIN=/usr/lib/openmpi/bin
++ export MPI_BIN
++ MPI_COMPILER=openmpi-arm
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib/gfortran/modules/openmpi-arm
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib/openmpi
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/openmpi-arm
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib/openmpi/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/openmpi-arm
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib/python2.7/site-packages/openmpi
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-arm
++ export MPI_SYSCONFIG
++ PATH=/usr/lib/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ PYTHONPATH=/usr/lib/python2.7/site-packages/openmpi
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/mpi/openmpi-arm
++ export _LMFILES_
+ export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ make -C openmpi -j4 test
make: Entering directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
Running tests...
/usr/bin/ctest3 --force-new-ctest-process 
Test project /builddir/build/BUILD/lammps-patch_17Jan2018/openmpi
    Start 1: ShowHelp
1/1 Test #1: ShowHelp .........................   Passed    0.51 sec
100% tests passed, 0 tests failed out of 1
Total Test time (real) =   0.52 sec
make: Leaving directory `/builddir/build/BUILD/lammps-patch_17Jan2018/openmpi'
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 31851 -ocomm=
+++ /bin/basename sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ '[' mpi/openmpi-arm = '' ']'
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module unload mpi/openmpi-arm
++ /usr/bin/modulecmd sh unload mpi/openmpi-arm
+ eval MANPATH=/usr/share/man:/usr/local/share/man ';export' 'MANPATH;PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;unset' 'LD_LIBRARY_PATH;unset' 'LOADEDMODULES;unset' 'MPI_BIN;unset' 'MPI_COMPILER;unset' 'MPI_FORTRAN_MOD_DIR;unset' 'MPI_HOME;unset' 'MPI_INCLUDE;unset' 'MPI_LIB;unset' 'MPI_MAN;unset' 'MPI_PYTHON_SITEARCH;unset' 'MPI_SUFFIX;unset' 'MPI_SYSCONFIG;unset' 'PYTHONPATH;unset' '_LMFILES_;'
++ MANPATH=/usr/share/man:/usr/local/share/man
++ export MANPATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ unset LD_LIBRARY_PATH
++ unset LOADEDMODULES
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ unset PYTHONPATH
++ unset _LMFILES_
+ exit 0
Processing files: lammps-20180117-1.el7.armv7hl
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.Ximey0
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_17Jan2018
+ DOCDIR=/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/doc/lammps-20180117
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/doc/lammps-20180117
+ cp -pr README /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/doc/lammps-20180117
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.mruE5x
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_17Jan2018
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/licenses/lammps-20180117
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/licenses/lammps-20180117
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/licenses/lammps-20180117
+ exit 0
Provides: lammps = 20180117-1.el7 lammps(armv7hl-32) = 20180117-1.el7 liblammps.so.0
Requires(interp): /sbin/ldconfig /sbin/ldconfig
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires(post): /sbin/ldconfig
Requires(postun): /sbin/ldconfig
Requires: ld-linux-armhf.so.3 ld-linux-armhf.so.3(GLIBC_2.4) libOpenCL.so.1 libOpenCL.so.1(OPENCL_1.0) libOpenCL.so.1(OPENCL_1.2) libOpenCL.so.1(OPENCL_2.0) libc.so.6 libc.so.6(GLIBC_2.11) libc.so.6(GLIBC_2.4) libfftw3.so.3 libgcc_s.so.1 libgcc_s.so.1(GCC_3.5) libgcc_s.so.1(GCC_4.0.0) libgfortran.so.3 libgfortran.so.3(GFORTRAN_1.0) libgfortran.so.3(GFORTRAN_1.4) libjpeg.so.62 libjpeg.so.62(LIBJPEG_6.2) liblammps.so.0 libm.so.6 libm.so.6(GLIBC_2.4) libpng15.so.15 libpng15.so.15(PNG15_0) libpython3.4m.so.1.0 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_ARM_1.3.3) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.9) libvoro++.so.0 libz.so.1 rtld(GNU_HASH)
Processing files: lammps-openmpi-20180117-1.el7.armv7hl
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.yZ06tz
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_17Jan2018
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/licenses/lammps-openmpi-20180117
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/licenses/lammps-openmpi-20180117
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/licenses/lammps-openmpi-20180117
+ exit 0
Provides: lammps-openmpi = 20180117-1.el7 lammps-openmpi(armv7hl-32) = 20180117-1.el7 liblammps.so.0
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-armhf.so.3 ld-linux-armhf.so.3(GLIBC_2.4) libOpenCL.so.1 libOpenCL.so.1(OPENCL_1.0) libOpenCL.so.1(OPENCL_1.2) libOpenCL.so.1(OPENCL_2.0) libc.so.6 libc.so.6(GLIBC_2.11) libc.so.6(GLIBC_2.4) libfftw3.so.3 libgcc_s.so.1 libgcc_s.so.1(GCC_3.5) libgcc_s.so.1(GCC_4.0.0) libgfortran.so.3 libgfortran.so.3(GFORTRAN_1.0) libgfortran.so.3(GFORTRAN_1.4) libjpeg.so.62 libjpeg.so.62(LIBJPEG_6.2) liblammps.so.0 libm.so.6 libm.so.6(GLIBC_2.4) libmpi.so.12 libmpi_cxx.so.1 libpng15.so.15 libpng15.so.15(PNG15_0) libpython3.4m.so.1.0 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_ARM_1.3.3) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.9) libvoro++.so.0 libz.so.1 rtld(GNU_HASH)
Processing files: lammps-mpich-20180117-1.el7.armv7hl
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.MaFhw4
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_17Jan2018
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/licenses/lammps-mpich-20180117
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/licenses/lammps-mpich-20180117
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/licenses/lammps-mpich-20180117
+ exit 0
Provides: lammps-mpich = 20180117-1.el7 lammps-mpich(armv7hl-32) = 20180117-1.el7 liblammps.so.0
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-armhf.so.3 ld-linux-armhf.so.3(GLIBC_2.4) libOpenCL.so.1 libOpenCL.so.1(OPENCL_1.0) libOpenCL.so.1(OPENCL_1.2) libOpenCL.so.1(OPENCL_2.0) libc.so.6 libc.so.6(GLIBC_2.11) libc.so.6(GLIBC_2.4) libfftw3.so.3 libgcc_s.so.1 libgcc_s.so.1(GCC_3.5) libgcc_s.so.1(GCC_4.0.0) libgfortran.so.3 libgfortran.so.3(GFORTRAN_1.0) libgfortran.so.3(GFORTRAN_1.4) libjpeg.so.62 libjpeg.so.62(LIBJPEG_6.2) liblammps.so.0 libm.so.6 libm.so.6(GLIBC_2.4) libmpich.so.10 libmpichcxx.so.10 libmpl.so.1 libopa.so.1 libpng15.so.15 libpng15.so.15(PNG15_0) libpthread.so.0 libpthread.so.0(GLIBC_2.4) libpython3.4m.so.1.0 librt.so.1 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_ARM_1.3.3) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.9) libvoro++.so.0 libz.so.1 rtld(GNU_HASH)
Processing files: python34-lammps-20180117-1.el7.armv7hl
Provides: python34-lammps = 20180117-1.el7 python34-lammps(armv7hl-32) = 20180117-1.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.4
Processing files: lammps-headers-20180117-1.el7.armv7hl
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.HKlqd9
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_17Jan2018
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/licenses/lammps-headers-20180117
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/licenses/lammps-headers-20180117
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm/usr/share/licenses/lammps-headers-20180117
+ exit 0
Provides: lammps-headers = 20180117-1.el7 lammps-headers(armv7hl-32) = 20180117-1.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: lammps-devel-20180117-1.el7.armv7hl
Provides: lammps-devel = 20180117-1.el7 lammps-devel(armv7hl-32) = 20180117-1.el7 pkgconfig(liblammps)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/pkg-config liblammps.so.0
Processing files: lammps-mpich-devel-20180117-1.el7.armv7hl
Provides: lammps-mpich-devel = 20180117-1.el7 lammps-mpich-devel(armv7hl-32) = 20180117-1.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: liblammps.so.0
Processing files: lammps-openmpi-devel-20180117-1.el7.armv7hl
Provides: lammps-openmpi-devel = 20180117-1.el7 lammps-openmpi-devel(armv7hl-32) = 20180117-1.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: liblammps.so.0
Processing files: lammps-debuginfo-20180117-1.el7.armv7hl
Provides: lammps-debuginfo = 20180117-1.el7 lammps-debuginfo(armv7hl-32) = 20180117-1.el7
Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm
Wrote: /builddir/build/RPMS/lammps-20180117-1.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-openmpi-20180117-1.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-mpich-20180117-1.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/python34-lammps-20180117-1.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-headers-20180117-1.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-devel-20180117-1.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-mpich-devel-20180117-1.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-openmpi-devel-20180117-1.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/lammps-debuginfo-20180117-1.el7.armv7hl.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.i0U5Vu
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_17Jan2018
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/lammps-20180117-1.el7.arm
+ exit 0
Child return code was: 0