Mock Version: 1.2.17
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target armv7hl --nodeps /builddir/build/SPECS/nco.spec'], chrootPath='/var/lib/mock/epel-1-armhfp-bdfa2744fb0c00e4c0814cc0175a576d21bcb20b/root'shell=FalseprintOutput=Falseenv={'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'HOSTNAME': 'mock'}gid=135user='mockbuild'timeout=0logger=<mockbuild.trace_decorator.getLog object at 0xb61cba70>uid=996)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target armv7hl --nodeps /builddir/build/SPECS/nco.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'HOSTNAME': 'mock'} and shell False
Building target platforms: armv7hl
Building for target armv7hl
Wrote: /builddir/build/SRPMS/nco-4.7.5-2.el7.src.rpm
Child return code was: 0
ENTER ['do'](['bash', '--login', '-c', u'/usr/bin/rpmbuild -bb --target armv7hl --nodeps /builddir/build/SPECS/nco.spec'], chrootPath='/var/lib/mock/epel-1-armhfp-bdfa2744fb0c00e4c0814cc0175a576d21bcb20b/root'shell=Falseuid=996env={'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'HOSTNAME': 'mock'}gid=135user='mockbuild'timeout=0private_network=Truelogger=<mockbuild.trace_decorator.getLog object at 0xb61cba70>printOutput=False)
Executing command: ['bash', '--login', '-c', u'/usr/bin/rpmbuild -bb --target armv7hl --nodeps /builddir/build/SPECS/nco.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'HOSTNAME': 'mock'} and shell False
Building target platforms: armv7hl
Building for target armv7hl
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.CIq7Pd
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf nco-4.7.5
+ /usr/bin/gzip -dc /builddir/build/SOURCES/nco-4.7.5.tar.gz
+ /usr/bin/tar -xf -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd nco-4.7.5
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
Patch #0 (nco-install_C_headers.patch):
+ echo 'Patch #0 (nco-install_C_headers.patch):'
+ /usr/bin/cat /builddir/build/SOURCES/nco-install_C_headers.patch
+ /usr/bin/patch -p1 -b --suffix .install_C_headers --fuzz=0
patching file src/nco/Makefile.in
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.215QKc
+ umask 022
+ cd /builddir/build/BUILD
+ cd nco-4.7.5
+ CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro '
+ export LDFLAGS
+ '[' 1 == 1 ']'
+ '[' arm == ppc64le ']'
++ find . -name config.guess -o -name config.sub
+ for i in '$(find . -name config.guess -o -name config.sub)'
++ basename ./autobld/config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./autobld/config.sub
++ basename ./autobld/config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./autobld/config.sub
'/usr/lib/rpm/redhat/config.sub' -> './autobld/config.sub'
+ for i in '$(find . -name config.guess -o -name config.sub)'
++ basename ./autobld/config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./autobld/config.guess
++ basename ./autobld/config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./autobld/config.guess
'/usr/lib/rpm/redhat/config.guess' -> './autobld/config.guess'
+ ./configure --build=armv7hl-redhat-linux-gnu --host=armv7hl-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info HAVE_ANTLR=yes --disable-dependency-tracking --includedir=/usr/include/nco
checking build system type... armv7hl-redhat-linux-gnu
checking host system type... armv7hl-redhat-linux-gnu
checking target system type... armv7hl-redhat-linux-gnu
./configure: line 2995: git: command not found
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for armv7hl-redhat-linux-gnu-gcc... no
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking for armv7hl-redhat-linux-gnu-g++... no
checking for armv7hl-redhat-linux-gnu-c++... no
checking for armv7hl-redhat-linux-gnu-gpp... no
checking for armv7hl-redhat-linux-gnu-aCC... no
checking for armv7hl-redhat-linux-gnu-CC... no
checking for armv7hl-redhat-linux-gnu-cxx... no
checking for armv7hl-redhat-linux-gnu-cc++... no
checking for armv7hl-redhat-linux-gnu-cl.exe... no
checking for armv7hl-redhat-linux-gnu-FCC... no
checking for armv7hl-redhat-linux-gnu-KCC... no
checking for armv7hl-redhat-linux-gnu-RCC... no
checking for armv7hl-redhat-linux-gnu-xlC_r... no
checking for armv7hl-redhat-linux-gnu-xlC... no
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
checking how to run the C preprocessor... gcc -E
checking how to run the C++ preprocessor... g++ -E
checking for gcc option to accept ISO C99... -std=gnu99
checking for gcc -std=gnu99 option to accept ISO Standard C... (cached) -std=gnu99
checking for flex... flex
checking lex output file root... lex.yy
checking lex library... none needed
checking whether yytext is a pointer... no
checking whether ln -s works... yes
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc -std=gnu99... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... 1572864
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert armv7hl-redhat-linux-gnu file names to armv7hl-redhat-linux-gnu format... func_convert_file_noop
checking how to convert armv7hl-redhat-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for armv7hl-redhat-linux-gnu-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for armv7hl-redhat-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for armv7hl-redhat-linux-gnu-ar... no
checking for ar... ar
checking for archiver @FILE support... @
checking for armv7hl-redhat-linux-gnu-strip... no
checking for strip... strip
checking for armv7hl-redhat-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc -std=gnu99 object... ok
checking for sysroot... no
checking for armv7hl-redhat-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc -std=gnu99 supports -fno-rtti -fno-exceptions... no
checking for gcc -std=gnu99 option to produce PIC... -fPIC -DPIC
checking if gcc -std=gnu99 PIC flag -fPIC -DPIC works... yes
checking if gcc -std=gnu99 static flag -static works... no
checking if gcc -std=gnu99 supports -c -o file.o... yes
checking if gcc -std=gnu99 supports -c -o file.o... (cached) yes
checking whether the gcc -std=gnu99 linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether to enable maintainer-specific portions of Makefiles... no
checking for working memcmp... yes
checking whether lstat correctly handles trailing slash... yes
checking whether stat accepts an empty string... no
checking for working strtod... yes
checking for canonicalize_file_name... yes
checking for floor... no
checking for gethostname... yes
checking for getpagesize... yes
checking for getrusage... yes
checking for memchr... yes
checking for memmove... yes
checking for memset... yes
checking for mkstemp... yes
checking for pow... no
checking for readlink... yes
checking for realpath... yes
checking for regcomp... yes
checking for setlocale... yes
checking for sqrt... no
checking for strchr... yes
checking for strerror... yes
checking for strpbrk... yes
checking for strrchr... yes
checking for strstr... yes
checking for strtol... yes
checking for ANSI C header files... (cached) yes
checking getopt.h usability... yes
checking getopt.h presence... yes
checking for getopt.h... yes
checking libintl.h usability... yes
checking libintl.h presence... yes
checking for libintl.h... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking for unistd.h... (cached) yes
checking cstdlib usability... yes
checking cstdlib presence... yes
checking for cstdlib... yes
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking for pid_t... yes
checking for size_t... yes
checking whether struct tm is in sys/time.h or time.h... time.h
checking for uid_t in sys/types.h... yes
checking for ptrdiff_t... yes
checking size of int*... 4
checking whether C++ compiler implements namespaces... yes
checking whether C++ compiler has working valarray<T>... yes
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... 64
#################################
#  Test for netCDF             #
################################
checking for /opt/local/include/netcdf.h... no
checking for /opt/local/lib/libnetcdf.a... no
checking netcdf.h usability... yes
checking netcdf.h presence... yes
checking for netcdf.h... yes
checking for nc_open in -lnetcdf... yes
#################################
#  Test for netCDF4 support     #
#################################
checking whether NC_CHUNKED is declared... yes
configure: netcdf.h contains netCDF4 definitions
checking for nc_def_var_chunking in -lnetcdf... yes
configure: Good news: Simple program compiles and links to netCDF4 library
checking netcdf_mem.h usability... no
checking netcdf_mem.h presence... no
checking for netcdf_mem.h... no
checking for gcc -std=gnu99 option to support OpenMP... -fopenmp
configure: OpenMP support enabled
Beginning generic tests for DAP support
Testing for DAP-netCDF support (is DAP in libnetcdf.a?)...
checking for daperror in -lnetcdf... yes
configure: DAP support enabled
checking for getopt_long... yes
checking for _g95_ac_array in -lf95... no
checking for sin in -lm... yes
checking for sinf in -lsunmath... no
checking for gettext in -lintl... no
checking for res_init in -lresolv... no
checking for main in -lsocket... no
checking for main in -lthread... no
checking for nco_open in -lnco... no
checking for nc_inq_format... yes
checking for nc_inq_path... yes
checking for nc_set_log_level... no
checking for getopt... yes
checking for getopt_long... (cached) yes
checking for atan2... yes
checking for acosf... yes
checking for asinf... yes
checking for atanf... yes
checking for atan2f... yes
checking for cosf... yes
checking for expf... yes
checking for fabsf... yes
checking for fmodf... yes
checking for log10f... yes
checking for logf... yes
checking for powf... yes
checking for sinf... yes
checking for sqrtf... yes
checking for tanf... yes
checking for erff... yes
checking for erfcf... yes
checking for gammaf... yes
checking for acoshf... yes
checking for asinhf... yes
checking for atanhf... yes
checking for coshf... yes
checking for sinhf... yes
checking for tanhf... yes
checking for ceilf... yes
checking for floorf... yes
checking for nearbyint... yes
checking for rint... yes
checking for round... yes
checking for trunc... yes
checking for nearbyintf... yes
checking for rintf... yes
checking for roundf... yes
checking for truncf... yes
checking for getopt_long... (cached) yes
checking for strdup... yes
checking for strcasecmp... yes
checking for strsep... yes
checking for strcasestr... yes
##########################################################
#     Sorting out MacOSX build parameters                #
##########################################################
#################################
#  Testing for ANTLR support    #
#################################
checking for runantlr... yes
configure: antlr library was found
checking antlr/CommonToken.hpp usability... yes
checking antlr/CommonToken.hpp presence... yes
checking for antlr/CommonToken.hpp... yes
INFO: ANTLR development support found---will build nco++ directory and ncap2
##################################################
# Testing for ESMF support (only for developers) #
##################################################
########################################
#     Testing for GSL support          #
########################################
configure: These GSL library and header tests must succeed for GSL support:
checking for gsl_sf_gamma_inc in -lgsl... yes
checking for /usr/include/gsl/gsl_sf_gamma.h... yes
configure: GSL support enabled
checking regex.h usability... yes
checking regex.h presence... yes
checking for regex.h... yes
checking for sys/types.h... (cached) yes
checking for regexec... yes
checking for regcomp... (cached) yes
checking for regfree... yes
########################################
#     Testing for UDUNITS support      #
########################################
WARNING: Requested both UDUnits and UDUnits2 support---overriding UDUnits
Will attempt to build NCO with UDUnits support from libudunits2, not from libudunits
checking for XML_ParserCreate in -lexpat... no
checking for /usr/include/udunits2/udunits2.h... yes
checking for /usr/include/udunits2.h... no
checking for /usr/lib/x86_64-linux-gnu/libudunits2.a... no
checking for /usr/lib/i386-linux-gnu/libudunits2.a... no
checking for /opt/local/include/udunits2/udunits2.h... no
checking for /opt/local/lib/libudunits2.a... no
checking for /usr/share/udunits/udunits2.xml... yes
configure: NB: Following tests of UDUnits2 library and header must succeed for UDUnits2 support:
checking for ut_read_xml in -ludunits2... yes
checking udunits2.h usability... yes
checking udunits2.h presence... yes
checking for udunits2.h... yes
configure: UDUnits2 support enabled
checking for ncgen... /usr/bin/ncgen
configure: Creating sample netCDF data files for self-tests
###############################
#    Require Shared Libs?     #
###############################
checking for makeinfo... yes
MAKEINFO_VERSION=5.1
configure: Documentation support enabled
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating data/Makefile
config.status: creating src/Makefile
config.status: creating src/nco/Makefile
config.status: creating man/Makefile
config.status: creating src/nco_c++/Makefile
config.status: creating src/nco++/Makefile
config.status: creating doc/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
Configuration Parameters:
AR_FLAGS............. cru
CC................... gcc -std=gnu99
CFLAGS............... -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE
CPP.................. gcc -E
CPPFLAGS............. -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2
CXX.................. g++
CXXFLAGS............. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard
ENABLE_DAP........... yes
ENABLE_ESMF...........no
ENABLE_GSL........... yes
ENABLE_LOGGING....... 
ENABLE_NETCDF4....... yes
ENABLE_OPENMP........ yes
ENABLE_UDUNITS....... no
ENABLE_UDUNITS2...... yes
GSL_ROOT............. /usr
HAVE_ANTLR........... yes
HAVE_MAKEINFO........ yes
HAVE_NETCDF4_H....... yes
HOST................. 
HOSTNAME............. 
LDFLAGS.............. -lnetcdf   -Wl,-z,relro 
LIBS................. -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
NETCDF_ROOT.......... /usr
OPENMP_CFLAGS........ -fopenmp
host................. armv7hl-redhat-linux-gnu
install prefix ...... /usr
*******************************************************************
Configuration complete. You are now ready to run 'make'.
Ensure 'make' points to GNU Make (AT&T Make chokes on GNU syntax).
If the build fails, please examine the file 'configure.eg'
in the top-level NCO directory.  It contains examples known to
build NCO for various platforms and compilers.
*******************************************************************
+ make -j4
make  all-recursive
make[1]: Entering directory `/builddir/build/BUILD/nco-4.7.5'
Making all in data
make[2]: Entering directory `/builddir/build/BUILD/nco-4.7.5/data'
/usr/bin/ncgen -o big.nc big.cdl 
/usr/bin/ncgen -o in_rec_zero.nc in_rec_zero.cdl 
/builddir/build/BUILD/nco-4.7.5/src/nco/ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc
make[2]: /builddir/build/BUILD/nco-4.7.5/src/nco/ncks: Command not found
/usr/bin/ncgen -k netCDF-4 -o in_4.nc in.cdl 
make[2]: [in_4c.nc] Error 127 (ignored)
/usr/bin/ncgen -k netCDF-4 -o in_grp_8.nc in_grp_8.cdl 
/usr/bin/ncgen -k netCDF-4 -o hdn.nc hdn.cdl 
/usr/bin/ncgen -k netCDF-4 -o mrd.nc mrd.cdl 
/usr/bin/ncgen -k netCDF-4 -o split.nc split.cdl 
/usr/bin/ncgen -k netCDF-4 -o ref_utf8.nc ref_utf8.cdl 
make[2]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/data'
Making all in src
make[2]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src'
Making all in nco
make[3]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src/nco'
gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncatted.o ncatted.c
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_att_utl.lo nco_att_utl.c
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_aux.lo nco_aux.c
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_bnr.lo nco_bnr.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_aux.c  -fPIC -DPIC -o .libs/nco_aux.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_att_utl.c  -fPIC -DPIC -o .libs/nco_att_utl.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_bnr.c  -fPIC -DPIC -o .libs/nco_bnr.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_bnr.c -o nco_bnr.o >/dev/null 2>&1
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/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnf_dmn.lo nco_cnf_dmn.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cln_utl.c  -fPIC -DPIC -o .libs/nco_cln_utl.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnf_dmn.c  -fPIC -DPIC -o .libs/nco_cnf_dmn.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_aux.c -o nco_aux.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnf_typ.lo nco_cnf_typ.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnf_dmn.c -o nco_cnf_dmn.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnf_typ.c  -fPIC -DPIC -o .libs/nco_cnf_typ.o
nco_cln_utl.c: In function 'nco_cln_var_prs':
nco_cln_utl.c:1162:27: warning: 'mss_val_flt' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if(var->has_mss_val && var->val.fp[idx]==mss_val_flt ){
                           ^
nco_cln_utl.c:1138:27: warning: 'mss_val_dbl' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if(var->has_mss_val && var->val.dp[idx]==mss_val_dbl) {
                           ^
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cln_utl.c -o nco_cln_utl.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_att_utl.c -o nco_att_utl.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnk.lo nco_cnk.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnk.c  -fPIC -DPIC -o .libs/nco_cnk.o
nco_cnk.c: In function 'nco_cnk_csh_ini':
nco_cnk.c:158:5: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' [-Wformat=]
     (void)fprintf(stderr,"%s: INFO %s reports chunk cache size = cnk_csh_byt = %ld B, # of slots in raw data chunk cache has table = nelemsp = %ld, pre-emption favor fraction = pmp_fvr_frc = %g\n",nco_prg_nm_get(),fnc_nm,cnk_csh_byt_crr,nelemsp,pmp_fvr_frc);
     ^
nco_cnk.c:158:5: warning: format '%ld' expects argument of type 'long int', but argument 6 has type 'size_t' [-Wformat=]
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnv_arm.lo nco_cnv_arm.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnv_arm.c  -fPIC -DPIC -o .libs/nco_cnv_arm.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnv_arm.c -o nco_cnv_arm.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnv_csm.lo nco_cnv_csm.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnv_csm.c  -fPIC -DPIC -o .libs/nco_cnv_csm.o
nco_cnv_csm.c: In function 'nco_cnv_cf_cll_mth_add':
nco_cnv_csm.c:350:9: warning: 'cll_mth_clm' may be used uninitialized in this function [-Wmaybe-uninitialized]
  att_val=strdup(cll_mth_clm);
         ^
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnk.c -o nco_cnk.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnv_csm.c -o nco_cnv_csm.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_ctl.lo nco_ctl.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_ctl.c  -fPIC -DPIC -o .libs/nco_ctl.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnf_typ.c -o nco_cnf_typ.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_dbg.lo nco_dbg.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_dbg.c  -fPIC -DPIC -o .libs/nco_dbg.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_dbg.c -o nco_dbg.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_dmn_utl.lo nco_dmn_utl.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_dmn_utl.c  -fPIC -DPIC -o .libs/nco_dmn_utl.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_ctl.c -o nco_ctl.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_fl_utl.lo nco_fl_utl.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_fl_utl.c  -fPIC -DPIC -o .libs/nco_fl_utl.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_dmn_utl.c -o nco_dmn_utl.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_grp_utl.lo nco_grp_utl.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_grp_utl.c  -fPIC -DPIC -o .libs/nco_grp_utl.o
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_grp_trv.lo nco_grp_trv.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_grp_trv.c  -fPIC -DPIC -o .libs/nco_grp_trv.o
nco_grp_utl.c: In function 'nco_cpy_var_dfn_trv':
nco_grp_utl.c:4949:5: warning: format '%ld' expects argument of type 'long int', but argument 5 has type 'size_t' [-Wformat=]
     for(int idx_dmn=0;idx_dmn<nbr_dmn_var;idx_dmn++) (void)fprintf(stdout,"name,ID,sz = %s,%d,%ld : ",dmn_cmn[idx_dmn].nm_fll,dmn_out_id[idx_dmn],dmn_cmn[idx_dmn].sz);
     ^
nco_grp_utl.c: In function 'nco_chk_nsm':
nco_grp_utl.c:10038:21: warning: format '%ld' expects argument of type 'long int', but argument 7 has type 'size_t' [-Wformat=]
                     var_nm_fll,dmn_nm,dmn_sz,tpl_sz);
                     ^
nco_grp_utl.c:10068:15: warning: format '%ld' expects argument of type 'long int', but argument 6 has type 'size_t' [-Wformat=]
               if (fl_idx == 0) (void)fprintf(stdout,"%s: DEBUG %s <%s> elements %ld\n",nco_prg_nm_get(),fnc_nm,var_trv->nm_fll,lmn_cnt);
               ^
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_lmt.lo nco_lmt.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_lmt.c  -fPIC -DPIC -o .libs/nco_lmt.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_fl_utl.c -o nco_fl_utl.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_grp_trv.c -o nco_grp_trv.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_lst_utl.lo nco_lst_utl.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_lst_utl.c  -fPIC -DPIC -o .libs/nco_lst_utl.o
nco_lst_utl.c: In function 'nco_fmt_sng_printf_subst':
nco_lst_utl.c:38:23: warning: unknown escape sequence: '\.' [enabled by default]
   const char rx_sng[]="%([+-0#'I])?([0-9]*)?([\.?[0-9]*)?([h+l+Ljzt])?[bcdeEfFgGiosuxX]"; /* [sng] Regular expression pattern */
                       ^
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_lmt.c -o nco_lmt.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_lst_utl.c -o nco_lst_utl.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_map.lo nco_map.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_map.c  -fPIC -DPIC -o .libs/nco_map.o
nco_map.c: In function 'nco_map_mk':
nco_map.c:440:3: warning: format '%li' expects argument of type 'long int', but argument 4 has type 'size_t' [-Wformat=]
   if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(stdout,"%s: INFO Defining mapfile based on %li links\n",nco_prg_nm_get(),lnk_nbr);
   ^
nco_map.c:398:9: warning: variable 'fl_out_tmp' set but not used [-Wunused-but-set-variable]
   char *fl_out_tmp=NULL_CEWI;
         ^
nco_map.c:274:12: warning: variable 'flg_grd_out_rct' set but not used [-Wunused-but-set-variable]
   nco_bool flg_grd_out_rct=False; /* [flg] Rectangular coordinates */
            ^
nco_map.c:272:12: warning: variable 'flg_grd_in_rct' set but not used [-Wunused-but-set-variable]
   nco_bool flg_grd_in_rct=False; /* [flg] Rectangular coordinates */
            ^
nco_map.c:208:7: warning: variable 'bnd_nbr_out' set but not used [-Wunused-but-set-variable]
   int bnd_nbr_out; /* [nbr] Number of vertices for destination grid coordinates */
       ^
nco_map.c:190:8: warning: variable 'col_nbr_in' set but not used [-Wunused-but-set-variable]
   long col_nbr_in; /* [idx] Number of columns in source grid */
        ^
nco_map.c:189:7: warning: variable 'bnd_nbr_in' set but not used [-Wunused-but-set-variable]
   int bnd_nbr_in; /* [nbr] Number of vertices for source grid coordinates */
       ^
nco_map.c:27:16: warning: unused variable 'eps_rlt' [-Wunused-variable]
   const double eps_rlt=1.0e-14; /* [frc] Round-off error tolerance */
                ^
nco_map.c:26:16: warning: unused variable 'dgr2rdn' [-Wunused-variable]
   const double dgr2rdn=M_PI/180.0;
                ^
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_md5.lo nco_md5.c
nco_map.c:367:8: warning: 'lon_nbr_out' may be used uninitialized in this function [-Wmaybe-uninitialized]
  if(idx%lon_nbr_out == 0) idx_tst=idx;
        ^
nco_map.c:351:8: warning: 'lon_nbr_in' may be used uninitialized in this function [-Wmaybe-uninitialized]
  if(idx%lon_nbr_in == 0) idx_tst=idx;
        ^
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_md5.c  -fPIC -DPIC -o .libs/nco_md5.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_md5.c -o nco_md5.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_map.c -o nco_map.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_mmr.lo nco_mmr.c
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_msa.lo nco_msa.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_mmr.c  -fPIC -DPIC -o .libs/nco_mmr.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_msa.c  -fPIC -DPIC -o .libs/nco_msa.o
nco_mmr.c: In function 'nco_malloc':
nco_mmr.c:106:3: warning: format '%lu' expects argument of type 'long unsigned int', but argument 9 has type 'long long unsigned int' [-Wformat=]
   if(sz > sz_max) (void)fprintf(stdout,"%s: WARNING %s received request to allocate %lu B = %lu kB = %lu MB = %lu GB = %lu TB\n",nco_prg_nm_get(),fnc_nm,(unsigned long)sz,(unsigned long)sz/NCO_BYT_PER_KB,(unsigned long)sz/NCO_BYT_PER_MB,(unsigned long)sz/NCO_BYT_PER_GB,(unsigned long)sz/NCO_BYT_PER_TB);
   ^
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_mmr.c -o nco_mmr.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_mss_val.lo nco_mss_val.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_mss_val.c  -fPIC -DPIC -o .libs/nco_mss_val.o
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_mta.lo nco_mta.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_mta.c  -fPIC -DPIC -o .libs/nco_mta.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_mss_val.c -o nco_mss_val.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_mta.c -o nco_mta.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_msa.c -o nco_msa.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_netcdf.lo nco_netcdf.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_netcdf.c  -fPIC -DPIC -o .libs/nco_netcdf.o
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_omp.lo nco_omp.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_omp.c  -fPIC -DPIC -o .libs/nco_omp.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_omp.c -o nco_omp.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_pck.lo nco_pck.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_pck.c  -fPIC -DPIC -o .libs/nco_pck.o
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_ppc.lo nco_ppc.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_ppc.c  -fPIC -DPIC -o .libs/nco_ppc.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_pck.c -o nco_pck.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_ppc.c -o nco_ppc.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_netcdf.c -o nco_netcdf.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_grp_utl.c -o nco_grp_utl.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_prn.lo nco_prn.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_prn.c  -fPIC -DPIC -o .libs/nco_prn.o
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rec_var.lo nco_rec_var.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rec_var.c  -fPIC -DPIC -o .libs/nco_rec_var.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rec_var.c -o nco_rec_var.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rgr.lo nco_rgr.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rgr.c  -fPIC -DPIC -o .libs/nco_rgr.o
nco_rgr.c: In function 'nco_rgr_wgt':
nco_rgr.c:1623:5: warning: format '%li' expects argument of type 'long int', but argument 3 has type 'size_t' [-Wformat=]
     for(lnk_idx=0;lnk_idx<lnk_nbr;lnk_idx++) (void)fprintf(stdout,"%li %d %d %g\n",lnk_idx,row_dst_adr[lnk_idx],col_src_adr[lnk_idx],wgt_raw[lnk_idx]);
     ^
nco_prn.c: In function 'nco_prn_var_val_cmt':
nco_prn.c:1002:10: warning: 'val_sz_byt' may be used uninitialized in this function [-Wmaybe-uninitialized]
   size_t val_sz_byt;
          ^
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rth_flt.lo nco_rth_flt.c
nco_rgr.c:3503:3: warning: format '%li' expects argument of type 'long int', but argument 4 has type 'size_t' [-Wformat=]
   if(nco_dbg_lvl_get() >= nco_dbg_std) (void)fprintf(fp_stdout,"Extensive variable %s: dst_idx = %li, tally = %d, val_out_b4 = %g, wgt_vld_out = %g, val_out_after = %g\n",trv.nm,dst_idx,tally[dst_idx],var_val_dbl_out[dst_idx],wgt_vld_out[dst_idx],var_val_dbl_out[dst_idx]*wgt_vld_out[dst_idx]);
   ^
nco_rgr.c: In function 'nco_sph_plg_area':
nco_rgr.c:3994:9: warning: variable 'ngl_ltr_c' set but not used [-Wunused-but-set-variable]
  double ngl_ltr_c; /* [rdn] Interior angle/great circle arc c, canonical latitude-triangle geometry */
         ^
nco_rgr.c:3993:9: warning: variable 'ngl_ltr_b' set but not used [-Wunused-but-set-variable]
  double ngl_ltr_b; /* [rdn] Interior angle/great circle arc b, canonical latitude-triangle geometry */
         ^
nco_rgr.c:3992:9: warning: variable 'ngl_ltr_a' set but not used [-Wunused-but-set-variable]
  double ngl_ltr_a; /* [rdn] Interior angle/small circle arc a, canonical latitude-triangle geometry */
         ^
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rth_flt.c  -fPIC -DPIC -o .libs/nco_rth_flt.o
nco_rgr.c: In function 'nco_grd_nfr':
nco_rgr.c:6821:6: warning: format '%li' expects argument of type 'long int', but argument 5 has type 'size_t' [-Wformat=]
      if(wrn_nbr == wrn_nbr_max) (void)fprintf(stdout,"%s: %s INFO Number of non-CCW errors reached maximum = %li, not printing anymore\n",nco_prg_nm_get(),fnc_nm,wrn_nbr_max);
      ^
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rth_flt.c -o nco_rth_flt.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rth_utl.lo nco_rth_utl.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rth_utl.c  -fPIC -DPIC -o .libs/nco_rth_utl.o
nco_prn.c: In function 'nco_prn_var_dfn':
nco_prn.c:1719:43: warning: 'vln_lng_avg' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if(cls_typ == NC_VLEN) (void)fprintf(fp_out," // RAM size = %s = %li*%g*%lu = %lu bytes",sz_sng,var_sz,vln_lng_avg,(unsigned long)nco_typ_lng_ntm(nc_id,bs_typ),(unsigned long)ram_sz_crr); else (void)fprintf(fp_out," // RAM size = %s = %li*%lu = %lu bytes",sz_sng,var_sz,(unsigned long)nco_typ_lng_ntm(nc_id,bs_typ),(unsigned long)ram_sz_crr);
                                           ^
nco_prn.c: In function 'nco_prn_att':
nco_prn.c:678:7: warning: 'mbr_val' may be used uninitialized in this function [-Wmaybe-uninitialized]
    rcd=nco_inq_enum_ident(grp_id,att[idx].type,mbr_val,mbr_nm);
       ^
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rth_utl.c -o nco_rth_utl.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_scl_utl.lo nco_scl_utl.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_scl_utl.c  -fPIC -DPIC -o .libs/nco_scl_utl.o
nco_rgr.c: In function 'nco_rgr_ini':
nco_rgr.c:394:9: warning: 'cnv_nbr' may be used uninitialized in this function [-Wmaybe-uninitialized]
       if(cnv_nbr != 4) cnv_nbr=sscanf(rgr_lst[rgr_var_idx].val,"%lf,%lf,%lf,%lf",&rgr->lon_wst,&rgr->lon_est,&rgr->lat_sth,&rgr->lat_nrt);
         ^
nco_prn.c: In function 'nco_prn_var_val_trv':
nco_prn.c:2353:74: warning: 'vln_lngm1' may be used uninitialized in this function [-Wmaybe-uninitialized]
    case NC_UINT64: for(vln_idx=0;vln_idx<vln_lng;vln_idx++) (void)fprintf(fp_out,fmt_sng,vln_val_ui64p[vln_idx],(vln_idx != vln_lngm1) ? spr_sng : ""); break;
                                                                          ^
nco_prn.c:2353:20: warning: 'vln_lng' may be used uninitialized in this function [-Wmaybe-uninitialized]
    case NC_UINT64: for(vln_idx=0;vln_idx<vln_lng;vln_idx++) (void)fprintf(fp_out,fmt_sng,vln_val_ui64p[vln_idx],(vln_idx != vln_lngm1) ? spr_sng : ""); break;
                    ^
nco_prn.c:2176:17: warning: 'vln_val_ui64p' may be used uninitialized in this function [-Wmaybe-uninitialized]
     nco_uint64 *vln_val_ui64p;
                 ^
nco_prn.c:2175:16: warning: 'vln_val_i64p' may be used uninitialized in this function [-Wmaybe-uninitialized]
     nco_int64 *vln_val_i64p;
                ^
nco_prn.c:2174:15: warning: 'vln_val_uip' may be used uninitialized in this function [-Wmaybe-uninitialized]
     nco_uint *vln_val_uip;
               ^
nco_prn.c:2173:17: warning: 'vln_val_usp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     nco_ushort *vln_val_usp;
                 ^
nco_prn.c:2349:100: warning: 'vln_val_ubp' may be used uninitialized in this function [-Wmaybe-uninitialized]
    case NC_UBYTE: for(vln_idx=0;vln_idx<vln_lng;vln_idx++) (void)fprintf(fp_out,fmt_sng,vln_val_ubp[vln_idx],(vln_idx != vln_lngm1) ? spr_sng : ""); break;
                                                                                                    ^
nco_prn.c:2348:98: warning: 'vln_val_bp' may be used uninitialized in this function [-Wmaybe-uninitialized]
    case NC_BYTE: for(vln_idx=0;vln_idx<vln_lng;vln_idx++) (void)fprintf(fp_out,fmt_sng,vln_val_bp[vln_idx],(vln_idx != vln_lngm1) ? spr_sng : ""); break;
                                                                                                  ^
nco_prn.c:2170:16: warning: 'vln_val_sp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     nco_short *vln_val_sp;
                ^
nco_prn.c:2341:85: warning: 'vln_val_ip' may be used uninitialized in this function [-Wmaybe-uninitialized]
        if(is_mss_val) (void)sprintf(val_sng,"%s",mss_val_sng); else rcd_prn=snprintf(val_sng,(size_t)NCO_ATM_SNG_LNG,fmt_sng,(long)vln_val_ip[vln_idx]);
                                                                                     ^
nco_prn.c:2168:12: warning: 'vln_val_fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     float *vln_val_fp;
            ^
nco_prn.c:2167:13: warning: 'vln_val_dp' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double *vln_val_dp;
             ^
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_scl_utl.c -o nco_scl_utl.o >/dev/null 2>&1
nco_prn.c:2375:22: warning: 'mbr_val' may be used uninitialized in this function [-Wmaybe-uninitialized]
    nco_inq_enum_ident(nc_id,var->type,mbr_val,mbr_nm);
                      ^
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_scm.lo nco_scm.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_scm.c  -fPIC -DPIC -o .libs/nco_scm.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_scm.c -o nco_scm.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_sld.lo nco_sld.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_sld.c  -fPIC -DPIC -o .libs/nco_sld.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_sld.c -o nco_sld.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_sng_utl.lo nco_sng_utl.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_sng_utl.c  -fPIC -DPIC -o .libs/nco_sng_utl.o
nco_sng_utl.c: In function 'sng2sng_sf':
nco_sng_utl.c:491:8: warning: unused variable 'sng_lngm1' [-Wunused-variable]
   long sng_lngm1=long_CEWI; /* [nbr] Length minus one of NC_CHAR string */
        ^
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_prn.c -o nco_prn.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_sng_utl.c -o nco_sng_utl.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_srm.lo nco_srm.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_srm.c  -fPIC -DPIC -o .libs/nco_srm.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_srm.c -o nco_srm.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_avg.lo nco_var_avg.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_avg.c  -fPIC -DPIC -o .libs/nco_var_avg.o
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_lst.lo nco_var_lst.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_lst.c  -fPIC -DPIC -o .libs/nco_var_lst.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_avg.c -o nco_var_avg.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_lst.c -o nco_var_lst.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_rth.lo nco_var_rth.c
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_scv.lo nco_var_scv.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_rth.c  -fPIC -DPIC -o .libs/nco_var_rth.o
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_scv.c  -fPIC -DPIC -o .libs/nco_var_scv.o
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=compile gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_utl.lo nco_var_utl.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_utl.c  -fPIC -DPIC -o .libs/nco_var_utl.o
nco_rgr.c: In function 'nco_grd_nfr':
nco_rgr.c:7136:7: warning: 'lon_typ' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(lon_typ == nco_grd_lon_nil){
       ^
nco_rgr.c:7021:7: warning: 'lat_typ' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(lat_typ == nco_grd_lat_nil){
       ^
nco_rgr.c:7412:17: warning: 'msk_unn.vp' may be used uninitialized in this function [-Wmaybe-uninitialized]
    if(msk_unn.ip[idx] == mss_val_int || msk_unn.ip[idx] == 0) msk[idx]=0;
                 ^
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_scv.c -o nco_var_scv.o >/dev/null 2>&1
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_utl.c -o nco_var_utl.o >/dev/null 2>&1
gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncbo.o ncbo.c
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_rth.c -o nco_var_rth.o >/dev/null 2>&1
gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncecat.o ncecat.c
gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncflint.o ncflint.c
gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncks.o ncks.c
gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncpdq.o ncpdq.c
ncks.c: In function 'main':
ncks.c:182:8: warning: 'in_id_arr' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int *in_id_arr; /* [id] netCDF file IDs used by OpenMP code */
        ^
ncks.c:1404:50: warning: 'fl_lst_in' may be used uninitialized in this function [-Wmaybe-uninitialized]
     if(fl_lst_in && fl_lst_abb == NULL) fl_lst_in=nco_sng_lst_free(fl_lst_in,fl_nbr); 
                                                  ^
libtool: compile:  gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rgr.c -o nco_rgr.o >/dev/null 2>&1
gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncra.o ncra.c
gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncrename.o ncrename.c
ncrename.c: In function 'main':
ncrename.c:530:5: warning: format '%ld' expects argument of type 'long int', but argument 7 has type 'size_t' [-Wformat=]
     if(nco_dbg_lvl_get() >= nco_dbg_io) (void)fprintf(stdout,"%s: att_rnm_lst[].old_nm = \"%s\", obj_nm = \"%s\", att_is_opt = %d, att_mch_fst = %ld, obj_is_opt = %d, obj_mch_fst = %ld, mch_fll_nm = %d, mch_grp_all = %d, mch_grp_glb = %d, mch_obj_all = %d\n",nco_prg_nm,att_rnm_lst[idx_att].old_nm,obj_nm,att_is_opt,att_mch_fst,obj_is_opt,obj_mch_fst,mch_fll_nm,mch_grp_all,mch_grp_glb,mch_obj_all);
     ^
ncrename.c:530:5: warning: format '%ld' expects argument of type 'long int', but argument 9 has type 'size_t' [-Wformat=]
gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncwa.o ncwa.c
gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncap_utl.o ncap_utl.c
test -f ncap_lex.c || /bin/sh ../../autobld/ylwrap ncap_lex.l lex.nco_yy.c ncap_lex.c -- flex  -Pnco_yy
gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..   -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncap_lex.o ncap_lex.c
ncap_lex.c:2724:16: warning: 'input' defined but not used [-Wunused-function]
     static int input  (void)
                ^
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=link gcc -std=gnu99  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -release 4.7.5 -lnetcdf   -Wl,-z,relro  -o libnco.la -rpath /usr/lib   nco_att_utl.lo nco_aux.lo nco_bnr.lo nco_cln_utl.lo nco_cnf_dmn.lo nco_cnf_typ.lo nco_cnk.lo nco_cnv_arm.lo nco_cnv_csm.lo nco_ctl.lo nco_dbg.lo nco_dmn_utl.lo nco_fl_utl.lo nco_grp_utl.lo nco_grp_trv.lo nco_lmt.lo nco_lst_utl.lo nco_map.lo nco_md5.lo nco_mmr.lo nco_msa.lo nco_mss_val.lo nco_mta.lo nco_netcdf.lo nco_omp.lo nco_pck.lo nco_ppc.lo nco_prn.lo nco_rec_var.lo nco_rgr.lo nco_rth_flt.lo nco_rth_utl.lo nco_scl_utl.lo nco_scm.lo nco_sld.lo nco_sng_utl.lo nco_srm.lo nco_var_avg.lo nco_var_lst.lo nco_var_rth.lo nco_var_scv.lo nco_var_utl.lo  -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  .libs/nco_att_utl.o .libs/nco_aux.o .libs/nco_bnr.o .libs/nco_cln_utl.o .libs/nco_cnf_dmn.o .libs/nco_cnf_typ.o .libs/nco_cnk.o .libs/nco_cnv_arm.o .libs/nco_cnv_csm.o .libs/nco_ctl.o .libs/nco_dbg.o .libs/nco_dmn_utl.o .libs/nco_fl_utl.o .libs/nco_grp_utl.o .libs/nco_grp_trv.o .libs/nco_lmt.o .libs/nco_lst_utl.o .libs/nco_map.o .libs/nco_md5.o .libs/nco_mmr.o .libs/nco_msa.o .libs/nco_mss_val.o .libs/nco_mta.o .libs/nco_netcdf.o .libs/nco_omp.o .libs/nco_pck.o .libs/nco_ppc.o .libs/nco_prn.o .libs/nco_rec_var.o .libs/nco_rgr.o .libs/nco_rth_flt.o .libs/nco_rth_utl.o .libs/nco_scl_utl.o .libs/nco_scm.o .libs/nco_sld.o .libs/nco_sng_utl.o .libs/nco_srm.o .libs/nco_var_avg.o .libs/nco_var_lst.o .libs/nco_var_rth.o .libs/nco_var_scv.o .libs/nco_var_utl.o   -lnetcdf -lcurl -lgsl -lgslcblas -ludunits2 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -Wl,-z -Wl,relro   -fopenmp -Wl,-soname -Wl,libnco-4.7.5.so -o .libs/libnco-4.7.5.so
libtool: link: (cd ".libs" && rm -f "libnco.so" && ln -s "libnco-4.7.5.so" "libnco.so")
libtool: link: ar cru .libs/libnco.a  nco_att_utl.o nco_aux.o nco_bnr.o nco_cln_utl.o nco_cnf_dmn.o nco_cnf_typ.o nco_cnk.o nco_cnv_arm.o nco_cnv_csm.o nco_ctl.o nco_dbg.o nco_dmn_utl.o nco_fl_utl.o nco_grp_utl.o nco_grp_trv.o nco_lmt.o nco_lst_utl.o nco_map.o nco_md5.o nco_mmr.o nco_msa.o nco_mss_val.o nco_mta.o nco_netcdf.o nco_omp.o nco_pck.o nco_ppc.o nco_prn.o nco_rec_var.o nco_rgr.o nco_rth_flt.o nco_rth_utl.o nco_scl_utl.o nco_scm.o nco_sld.o nco_sng_utl.o nco_srm.o nco_var_avg.o nco_var_lst.o nco_var_rth.o nco_var_scv.o nco_var_utl.o
libtool: link: ranlib .libs/libnco.a
libtool: link: ( cd ".libs" && rm -f "libnco.la" && ln -s "../libnco.la" "libnco.la" )
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=link gcc -std=gnu99  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE  -lnetcdf   -Wl,-z,relro  -o ncatted ncatted.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=link gcc -std=gnu99  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE  -lnetcdf   -Wl,-z,relro  -o ncecat ncecat.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=link gcc -std=gnu99  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE  -lnetcdf   -Wl,-z,relro  -o ncbo ncbo.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=link gcc -std=gnu99  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE  -lnetcdf   -Wl,-z,relro  -o ncflint ncflint.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
libtool: link: gcc -std=gnu99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -o .libs/ncatted ncatted.o  ./.libs/libnco.so -lnetcdf -lcurl -lgsl -lgslcblas -lm -ludunits2 -fopenmp
libtool: link: gcc -std=gnu99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -o .libs/ncbo ncbo.o  ./.libs/libnco.so -lnetcdf -lcurl -lgsl -lgslcblas -lm -ludunits2 -fopenmp
libtool: link: gcc -std=gnu99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -o .libs/ncflint ncflint.o  ./.libs/libnco.so -lnetcdf -lcurl -lgsl -lgslcblas -lm -ludunits2 -fopenmp
libtool: link: gcc -std=gnu99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -o .libs/ncecat ncecat.o  ./.libs/libnco.so -lnetcdf -lcurl -lgsl -lgslcblas -lm -ludunits2 -fopenmp
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=link gcc -std=gnu99  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE  -lnetcdf   -Wl,-z,relro  -o ncks ncks.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=link gcc -std=gnu99  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE  -lnetcdf   -Wl,-z,relro  -o ncpdq ncpdq.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=link gcc -std=gnu99  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE  -lnetcdf   -Wl,-z,relro  -o ncra ncra.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=link gcc -std=gnu99  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE  -lnetcdf   -Wl,-z,relro  -o ncrename ncrename.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
libtool: link: gcc -std=gnu99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -o .libs/ncpdq ncpdq.o  ./.libs/libnco.so -lnetcdf -lcurl -lgsl -lgslcblas -lm -ludunits2 -fopenmp
libtool: link: gcc -std=gnu99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -o .libs/ncks ncks.o  ./.libs/libnco.so -lnetcdf -lcurl -lgsl -lgslcblas -lm -ludunits2 -fopenmp
libtool: link: gcc -std=gnu99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -o .libs/ncra ncra.o  ./.libs/libnco.so -lnetcdf -lcurl -lgsl -lgslcblas -lm -ludunits2 -fopenmp
libtool: link: gcc -std=gnu99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -o .libs/ncrename ncrename.o  ./.libs/libnco.so -lnetcdf -lcurl -lgsl -lgslcblas -lm -ludunits2 -fopenmp
/bin/sh ../../libtool --tag=CXX  --tag=CC   --mode=link gcc -std=gnu99  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE  -lnetcdf   -Wl,-z,relro  -o ncwa ncwa.o ncap_utl.o ncap_lex.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
libtool: link: gcc -std=gnu99 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-z -Wl,relro -o .libs/ncwa ncwa.o ncap_utl.o ncap_lex.o  ./.libs/libnco.so -lnetcdf -lcurl -lgsl -lgslcblas -lm -ludunits2 -fopenmp
make[3]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/src/nco'
Making all in nco_c++
make[3]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src/nco_c++'
/bin/sh ../../libtool --tag=CXX  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..  -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libnco_c___la-nco_att.lo `test -f 'nco_att.cc' || echo './'`nco_att.cc
/bin/sh ../../libtool --tag=CXX  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..  -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libnco_c___la-nco_dmn.lo `test -f 'nco_dmn.cc' || echo './'`nco_dmn.cc
/bin/sh ../../libtool --tag=CXX  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..  -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libnco_c___la-nco_fl.lo `test -f 'nco_fl.cc' || echo './'`nco_fl.cc
/bin/sh ../../libtool --tag=CXX  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..  -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libnco_c___la-nco_hgh.lo `test -f 'nco_hgh.cc' || echo './'`nco_hgh.cc
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nco_dmn.cc  -fPIC -DPIC -o .libs/libnco_c___la-nco_dmn.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nco_att.cc  -fPIC -DPIC -o .libs/libnco_c___la-nco_att.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nco_fl.cc  -fPIC -DPIC -o .libs/libnco_c___la-nco_fl.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nco_hgh.cc  -fPIC -DPIC -o .libs/libnco_c___la-nco_hgh.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nco_hgh.cc -o libnco_c___la-nco_hgh.o >/dev/null 2>&1
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nco_dmn.cc -o libnco_c___la-nco_dmn.o >/dev/null 2>&1
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nco_fl.cc -o libnco_c___la-nco_fl.o >/dev/null 2>&1
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nco_att.cc -o libnco_c___la-nco_att.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..  -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libnco_c___la-nco_utl.lo `test -f 'nco_utl.cc' || echo './'`nco_utl.cc
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nco_utl.cc  -fPIC -DPIC -o .libs/libnco_c___la-nco_utl.o
/bin/sh ../../libtool --tag=CXX  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..  -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libnco_c___la-nco_var.lo `test -f 'nco_var.cc' || echo './'`nco_var.cc
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nco_var.cc  -fPIC -DPIC -o .libs/libnco_c___la-nco_var.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nco_utl.cc -o libnco_c___la-nco_utl.o >/dev/null 2>&1
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -DABORT_ON_ERROR -I/usr/include -I/usr/include/hdf -I/usr/include -I/usr/include/udunits2 -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nco_var.cc -o libnco_c___la-nco_var.o >/dev/null 2>&1
/bin/sh ../../libtool --tag=CXX  --tag=CXX   --mode=link g++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -release 4.7.5 -lnetcdf   -Wl,-z,relro  -o libnco_c++.la -rpath /usr/lib libnco_c___la-nco_att.lo libnco_c___la-nco_dmn.lo libnco_c___la-nco_fl.lo libnco_c___la-nco_hgh.lo libnco_c___la-nco_utl.lo libnco_c___la-nco_var.lo  -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  .libs/libnco_c___la-nco_att.o .libs/libnco_c___la-nco_dmn.o .libs/libnco_c___la-nco_fl.o .libs/libnco_c___la-nco_hgh.o .libs/libnco_c___la-nco_utl.o .libs/libnco_c___la-nco_var.o   -lnetcdf -lcurl -lgsl -lgslcblas -ludunits2 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libnco_c++-4.7.5.so -o .libs/libnco_c++-4.7.5.so
libtool: link: (cd ".libs" && rm -f "libnco_c++.so" && ln -s "libnco_c++-4.7.5.so" "libnco_c++.so")
libtool: link: ar cru .libs/libnco_c++.a  libnco_c___la-nco_att.o libnco_c___la-nco_dmn.o libnco_c___la-nco_fl.o libnco_c___la-nco_hgh.o libnco_c___la-nco_utl.o libnco_c___la-nco_var.o
libtool: link: ranlib .libs/libnco_c++.a
libtool: link: ( cd ".libs" && rm -f "libnco_c++.la" && ln -s "../libnco_c++.la" "libnco_c++.la" )
make[3]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/src/nco_c++'
Making all in nco++
make[3]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src/nco++'
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o Invoke.o Invoke.cc
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o ncap2.o ncap2.cc
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o ncap2_utl.o ncap2_utl.cc
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o ncap2_att.o ncap2_att.cc
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o sdo_utl.o sdo_utl.cc
Invoke.cc: In function 'int parse_antlr(std::vector<prs_cls>&, char*, char*)':
Invoke.cc:131:7: warning: 'iret' may be used uninitialized in this function [-Wmaybe-uninitialized]
   int iret;
       ^
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o sym_cls.o sym_cls.cc
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o fmc_cls.o fmc_cls.cc
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o fmc_all_cls.o fmc_all_cls.cc
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o fmc_gsl_cls.o fmc_gsl_cls.cc
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o prs_cls.o prs_cls.cc
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o NcapVar.o NcapVar.cc
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o NcapVarVector.o NcapVarVector.cc
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o ncoLexer.o ncoLexer.cpp
fmc_gsl_cls.cc: In member function 'var_sct* gsl_fit_cls::fit_est_fnd(bool&, std::vector<antlr::ASTRefCount<antlr::AST> >&, fmc_cls&, ncoTree&)':
fmc_gsl_cls.cc:4988:13: warning: 'mss_val_dbl' may be used uninitialized in this function [-Wmaybe-uninitialized]
             if(var_out->val.dp[jdx] != mss_val_dbl) 
             ^
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o ncoParser.o ncoParser.cpp
g++ -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o ncoTree.o ncoTree.cpp
gcc -std=gnu99 -DHAVE_CONFIG_H -I. -I../..  -I./ -I../nco -I/usr/include -I/usr/include/hdf  -I/usr/include -I/usr/include/udunits2  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_gsl.o nco_gsl.c
/bin/sh ../../libtool --tag=CXX  --tag=CXX   --mode=link g++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -L../nco -lnco -lantlr -lgsl -lgslcblas -lm -lnetcdf   -Wl,-z,relro  -o ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o  -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf  -lcurl -lgsl -lgslcblas -lm -ludunits2
libtool: link: g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro -o .libs/ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o  -L../nco /builddir/build/BUILD/nco-4.7.5/src/nco/.libs/libnco.so -lantlr -lnetcdf -lcurl -lgsl -lgslcblas -lm -ludunits2 -fopenmp
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restore=: && backupdir=".am$$" && \
am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd . && \
rm -rf $backupdir && mkdir $backupdir && \
if (/bin/sh /builddir/build/BUILD/nco-4.7.5/autobld/missing makeinfo --version) >/dev/null 2>&1; then \
  for f in nco.info nco.info-[0-9] nco.info-[0-9][0-9] nco.i[0-9] nco.i[0-9][0-9]; do \
    if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \
  done; \
else :; fi && \
cd "$am__cwd"; \
if /bin/sh /builddir/build/BUILD/nco-4.7.5/autobld/missing makeinfo   -I . \
 -o nco.info nco.texi; \
then \
  rc=0; \
  CDPATH="${ZSH_VERSION+.}:" && cd .; \
else \
  rc=$?; \
  CDPATH="${ZSH_VERSION+.}:" && cd . && \
  $restore $backupdir/* `echo "./nco.info" | sed 's|[^/]*$||'`; \
fi; \
rm -rf $backupdir; exit $rc
make[2]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/doc'
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make[1]: Leaving directory `/builddir/build/BUILD/nco-4.7.5'
+ make -C doc html pdf
make: Entering directory `/builddir/build/BUILD/nco-4.7.5/doc'
rm -rf nco.htp
if /bin/sh /builddir/build/BUILD/nco-4.7.5/autobld/missing makeinfo --html --ifinfo --no-split  -I . \
 -o nco.htp nco.texi; \
then \
  rm -rf nco.html && mv nco.htp nco.html; \
else \
  rm -rf nco.htp; exit 1; \
fi
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MAKEINFO='/bin/sh /builddir/build/BUILD/nco-4.7.5/autobld/missing makeinfo   -I .' \
texi2dvi --pdf --batch  --build-dir=nco.t2p -o nco.pdf  \
nco.texi
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Loading texinfo [version 2013-09-10.16]: pdf, fonts, markup, glyphs,
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(Summary) [2] [3] [4] Chapter 1 [5] [6]
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[14] [15] Chapter 2 [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26]
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_velocity http://nomads.ncep.noaa.gov:9090/dods/rtofs/rtofs_global20140303/rtof
s_glo_2ds_forecast_daily_prog ~/foo.nc[] 
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m to /[] 
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[81] [82] [83] [84] [85] [86]
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[89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102]
[103] [104] [105] [106] [107] [108] [109] [110]
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 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h
0.0001-01.nc[] 
[111] [112] [113] [114] [115]
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[116] [117] [118] [119] [120] [121] [122]
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 []      @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size-
1))' \[] 
[123]
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 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in
.nc out.nc[] 
[124] [125] [126] [127]
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 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 
273.9, 274[] 
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 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 
273.9, 274[] 
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 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te
mperature data[] 
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 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i
n.nc ~/foo.nc[] 
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 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt
h1.nc[] 
[128]
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 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt
h1.nc[] 
[129]
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 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc 
in.nc[] 
[130] [131] [132]
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 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n
c out.nc[] 
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[135] [136] [137] [138] [139] Chapter 4
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@texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by
[140] [141] [142] [143]
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 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-h] [--hdf] [--hdr
_pad @textttsl nbr@texttt ] [-L @textttsl dfl_lvl@texttt ] [-l @textttsl path@t
exttt ][] 
[144] [145] [146] [147] [148]
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 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime
nsion)[] 
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 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size 
is fixed[] 
[149] [150]
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 [][] 
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 []@texttt (A) var_out=array(val_srt, val_inc, $dmn_nm);           // One-dimen
sional output[] 
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 []@texttt (B) var_out=array(val_srt, val_inc, var_tpl);           // Multi-dim
ensional output[] 
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 []@texttt (C) var_out=array(val_srt, val_inc, /$dmn1,$dmn2...,$dmnN/); // Mult
i-dimensional output[] 
[151]
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 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24
.5,26.5,28.5[] 
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 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636
, 14.13716 ;[] 
[152] [153] [154] [155]
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[162] [163] [164] [165]
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 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc 
foo.nc[] 
[166] [167]
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 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n
3 type double[] 
[168] [169]
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[]@textrm Consider ir-reg-u-
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[170] [171]
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 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/
nco/data:"[] 
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 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s
rt_map[] 
[172] [173] [174] [175]
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 []@texttt //print("sorted time (ascending order) and associated sort map =\n")
;print(time);print(srt_map);[] 
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 []   @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re
sizes)[] 
[176] [177]
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[181]
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 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min
 && XLONG <= lon_max);[] 
[182]
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 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_
in_x,grid_in_y)[] 
[183] [184] [185] [186]
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 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| 
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 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| 
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@textrm gsl[]sf[]coulomb[]wave[]FGp[]array| 
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@textrm gsl[]sf[]coulomb[]wave[]sphF[]array| 
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@textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| 
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 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)|
 
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@textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]
expr)| 
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 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]Plm[]deriv[]array| 
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 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| 
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@textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| 
[187] [188] [189] [190] [191] [192] [193]
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[]@texttt status=@textbf gsl[]fit[]linear
[194]
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[]@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri
de_w,data_y,stride_
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[]@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_
w,data_y,stride_
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 [][] 
[195]
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 [][] 
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 [][] 
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 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri
de, size_t n, double mean);[] 
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 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s
ize_t stride, size_t n);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si
ze_t stride, size_t n, double f) ;[] 
[196]
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 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m
ean);[] 
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 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st
ride, n, var_mean);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st
ride, n, var_f) ;[] 
[197] [198]
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 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639
02, 7730127, 15531355, 10387694 ;[] 
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 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n
c foo.nc[] 
[199] [200] [201] [202]
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 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text
rm , $@texti e[]$@textrm . Ex-am-ple:
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 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t
extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple:
[203]
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 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl
 x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple:
[204] [205]
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 [][] 
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 [][] 
[206]
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 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14.
50, 15.00};[] 
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 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05
458, 37.39353, 43.29914, 49.55782 ;[] 
[207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218]
[219]
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 []@texttt [-E @textttsl yr_prv@texttt ] [-e @textttsl yr_end@texttt ] [-f @tex
tttsl fml_nm@texttt ] [--fl_fmt=@textttsl fl_fmt@texttt ] [-h @textttsl hst_nm@
texttt ] [-i @textttsl drc_in@texttt ][] 
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utput=drc_out[] 
[220] [221] [222] [223] [224]
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 []@texttt ncclimo --seasons=none ...            # Produce only monthly climos[
] 
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 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN
N[] 
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo -v T,Q,RH -s 1 -e 9 -o $dr
c_out[] 
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo -v T,Q,RH -s 1 -e 9 -o
 $drc_out < foo[] 
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 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl -
O drc_rgr[] 
[229]
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 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm -
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma
p.nc \[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg
r_prv -r map.nc[] 
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r -r map.nc \[] 
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 -N ncclimo[] 
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climo[] 
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me=ncclimo[] 
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 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc
limo \[] 
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 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--ga
g] [--glb ...] [-h] [--hdf] [--hdr_pad @textttsl nbr@texttt ][] 
[239] [240] [241]
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x sfx][] 
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 []@texttt [-F] [--fix_rec_crd] [-G @textttsl gpe_dsc@texttt ] [-g @textttsl gr
p@texttt [,[]]] [--glb ...] [-h] [--hdr_pad @textttsl nbr@texttt ][] 
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issions.nc[] 
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rec_var[] 
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 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n
c[] 
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[] 
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s)[] 
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 packages?)[] 
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conda)[] 
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ian packages?)[] 
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 []@texttt hdp dumpsds ~/in.hdf                        # ncdump/h5dump-equivale
nt for HDF4[] 
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nt for HDF4[] 
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.nc[] 
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 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0.
123456789[] 
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 0.12345678, 0.123456789 ;[] 
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.123 ;[] 
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edrm NcML[] @textrm out-put:
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/' | sort[] 
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 cut -f 11- -d ' ' | sort[] 
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 []@texttt # Change values to be sure original values are not copied in followi
ng step[] 
[265] [266] [267]
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 []@texttt [-R] [-r] [--ram_all] [-t @textttsl thr_nbr@texttt ] [-U] [--unn] [-
v @textttsl var@texttt [,[]]] [-X ...] [-x][] 
[268] [269] [270] [271] [272] [273] [274]
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 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension 
named "time"[] 
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 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim
ension[] 
[275]
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 []@texttt [-D @textttsl dbg@texttt ] [-d @textttsl dim@texttt ,[@textttsl min@
texttt ][,[@textttsl max@texttt ][,[@textttsl stride@texttt ][,[@textttsl subcy
cle@texttt ]]]] [-F] [--fl_fmt @textttsl fl_fmt@texttt ][] 
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 []@texttt [-O] [-o @textttsl output-
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 @textttsl file@texttt ] [-p @textttsl path@texttt ] [--ppc ...] [-R] [-r] [--r
am_all] [--rec_apn] [--rth_dbl|flt][] 
[276] [277] [278] [279]
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 []@texttt [-D @textttsl dbg@texttt ] [-d @textttsl dim@texttt ,[@textttsl min@
texttt ][,[@textttsl max@texttt ][,[@textttsl stride@texttt ][,[@textttsl subcy
cle@texttt ]]]] [-F] [--fl_fmt @textttsl fl_fmt@texttt ][] 
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[280] [281]
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 []@texttt [--msk_dst=@textttsl msk_dst@texttt ] [--msk_out=@textttsl msk_out@t
exttt ] [--msk_src=@textttsl msk_src@texttt ] [--mss_val=@textttsl mss_val@text
tt ][] 
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 []@textrm Options: `@texttt --in_type cgll --in_np 4 --out_type fv
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[284]
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nc[] 
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nc[] 
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p.nc[] 
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 []@texttt ....Try swapping order of mesh A and B, or override with --allow_no_
overlap[] 
[285] [286] [287] [288] [289] [290] [291]
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 []@texttt ncremap -V var_rgr -i in.nc -d dst.nc -O ~/rgr # CF coordinates conv
ention[] 
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 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -i in.nc -d dst.nc -O ~
/rgr # Manual[] 
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pas_ncpdq.nc[] 
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 []@texttt ncremap -R "--rgr col_nm=nCells" -i mpas_ncpdq.nc -m mpas120_to_t62.
nc -O ~/rgr[] 
[297] [298] [299] [300] [301]
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 []@texttt [--glb ...] [-h] [--hdf] [--hdr_pad @textttsl nbr@texttt ] [-l @text
ttsl path@texttt ] [-O] [-o @textttsl output-
[302] [303] [304]
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 []@texttt ncwa [-3] [-4] [-5] [-6] [-7] [-A] [-a @textttsl dim@texttt [,[]]] [
-B @textttsl mask_cond@texttt ] [-b] [-C] [-c][] 
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[308] [309] [310] [311] Chapter 5 [312] [313] [314] [315] Chapter 6 [316]
[317] Chapter 7 [318] (/builddir/build/BUILD/nco-4.7.5/doc/xmp/cmb_fl.sh
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[323]) </builddir/build/BUILD/nco-4.7.5/doc/xmp/fgr1.png> [324]
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[326]) </builddir/build/BUILD/nco-4.7.5/doc/xmp/fgr2.png> [327] [328]
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Chapter 9 [345] [346]
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[352] Chapter 10 [353] [354] (General Index) [355] [356] [357] [358] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
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[-4]) [-5] [-6] (./nco.toc) (./nco.toc) (Foreword) [1] (Summary) [2] [3]
[4] Chapter 1 [5] [6] [7] [8] [9] [10] [11] [12]
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[13] [14] [15] Chapter 2 [16] [17] [18] [19] [20] [21] [22] [23] [24] [25]
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[135] [136] [137] [138] [139] Chapter 4
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 []@texttt (B) var_out=array(val_srt, val_inc, var_tpl);           // Multi-dim
ensional output[] 
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 []@texttt (C) var_out=array(val_srt, val_inc, /$dmn1,$dmn2...,$dmnN/); // Mult
i-dimensional output[] 
[151]
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 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24
.5,26.5,28.5[] 
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 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636
, 14.13716 ;[] 
[152] [153] [154] [155]
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 [][] 
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 [][] 
[158] [159] [160]
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[161]
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 [][] 
[162] [163] [164] [165]
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 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc 
foo.nc[] 
[166] [167]
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 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n
3 type double[] 
[168] [169]
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[]@textrm Consider ir-reg-u-
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 [][] 
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[170] [171]
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 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/
nco/data:"[] 
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 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s
rt_map[] 
[172] [173] [174] [175]
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 []@texttt //print("sorted time (ascending order) and associated sort map =\n")
;print(time);print(srt_map);[] 
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 []   @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re
sizes)[] 
[176] [177]
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[181]
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 [][] 
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 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min
 && XLONG <= lon_max);[] 
[182]
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 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_
in_x,grid_in_y)[] 
[183] [184] [185] [186]
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 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| 
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 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| 
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@textrm gsl[]sf[]coulomb[]wave[]FGp[]array| 
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@textrm gsl[]sf[]coulomb[]wave[]sphF[]array| 
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@textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| 
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 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)|
 
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@textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]
expr)| 
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 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]Plm[]deriv[]array| 
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 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| 
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@textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| 
[187] [188] [189] [190] [191] [192] [193]
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[]@texttt status=@textbf gsl[]fit[]linear
[194]
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[]@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri
de_w,data_y,stride_
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[]@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_
w,data_y,stride_
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 [][] 
[195]
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 [][] 
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 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri
de, size_t n, double mean);[] 
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 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s
ize_t stride, size_t n);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si
ze_t stride, size_t n, double f) ;[] 
[196]
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 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m
ean);[] 
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 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st
ride, n, var_mean);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st
ride, n, var_f) ;[] 
[197] [198]
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 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639
02, 7730127, 15531355, 10387694 ;[] 
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 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n
c foo.nc[] 
[199] [200] [201] [202]
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 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text
rm , $@texti e[]$@textrm . Ex-am-ple:
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 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t
extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple:
[203]
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 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl
 x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple:
[204] [205]
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 [][] 
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[206]
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 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14.
50, 15.00};[] 
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 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05
458, 37.39353, 43.29914, 49.55782 ;[] 
[207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218]
[219]
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 []@texttt [-E @textttsl yr_prv@texttt ] [-e @textttsl yr_end@texttt ] [-f @tex
tttsl fml_nm@texttt ] [--fl_fmt=@textttsl fl_fmt@texttt ] [-h @textttsl hst_nm@
texttt ] [-i @textttsl drc_in@texttt ][] 
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 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o
utput=drc_out[] 
[220] [221] [222] [223] [224]
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 []@texttt ncclimo --seasons=none ...            # Produce only monthly climos[
] 
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 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN
N[] 
[225] [226]
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo -v T,Q,RH -s 1 -e 9 -o $dr
c_out[] 
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo -v T,Q,RH -s 1 -e 9 -o
 $drc_out < foo[] 
[227]
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 [][] 
[228]
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 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl -
O drc_rgr[] 
[229]
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 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm -
[230]
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 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm -
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma
p.nc \[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg
r_prv -r map.nc[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg
r -r map.nc \[] 
[231]
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[232]
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 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu
 -N ncclimo[] 
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 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc
climo[] 
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 []@texttt salloc  -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na
me=ncclimo[] 
[233]
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 [][] 
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 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc
limo \[] 
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[234]
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[235] [236]
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[237] [238]
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 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--ga
g] [--glb ...] [-h] [--hdf] [--hdr_pad @textttsl nbr@texttt ][] 
[239] [240] [241]
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 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf
x sfx][] 
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 []@texttt [-O] [-o @textttsl output-
[242] [243] [244]
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 []@texttt [-F] [--fix_rec_crd] [-G @textttsl gpe_dsc@texttt ] [-g @textttsl gr
p@texttt [,[]]] [--glb ...] [-h] [--hdr_pad @textttsl nbr@texttt ][] 
[245] [246]
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 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em
issions.nc[] 
[247] [248] [249]
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 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[]
 
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 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_
rec_var[] 
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 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n
c[] 
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 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only
[] 
[250] [251]
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 [][] 
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[252]
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 []@texttt /usr/hdf4/bin/ncgen -b -o ~/in.hdf ~/in.cdl # HDF ncgen (local build
s)[] 
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 []@texttt /usr/bin/hncgen     -b -o ~/in.hdf ~/in.cdl # Same as HDF ncgen (RPM
 packages?)[] 
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 []@texttt /usr/bin/h4_ncgen   -b -o ~/in.hdf ~/in.cdl # Same as HDF ncgen (Ana
conda)[] 
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 []@texttt /usr/bin/ncgen-hdf  -b -o ~/in.hdf ~/in.cdl # Same as HDF ncgen (Deb
ian packages?)[] 
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 []@texttt hdp dumpsds ~/in.hdf                        # ncdump/h5dump-equivale
nt for HDF4[] 
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 []@texttt h4_ncdump dumpsds ~/in.hdf                  # ncdump/h5dump-equivale
nt for HDF4[] 
[253]
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 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out
.nc[] 
[254]
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[255]
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[256]
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[257] [258]
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[259]
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 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0.
123456789[] 
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 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567,
 0.12345678, 0.123456789 ;[] 
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 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0
.123 ;[] 
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[260]
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 [][] 
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 [][] 
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 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc
edrm NcML[] @textrm out-put:
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[261]
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 [][] 
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 []@texttt ncks --trd -m in.nc | grep -E ': type' | cut -f 1 -d ' ' | sed 's/:/
/' | sort[] 
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 []@texttt ncks --trd -M -m in.nc | grep -E -i "^z attribute [0-9]+: purpose" |
 cut -f 11- -d ' ' | sort[] 
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[262]
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Chapter 9 [345] [346]
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[352] Chapter 10 [353] [354] (General Index) [355] [356] (./nco.cps [357]
[358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369]
[370] [371] [372] [373] [374]) [375] [376] )
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[4] Chapter 1 [5] [6] [7] [8] [9] [10] [11] [12]
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[13] [14] [15] Chapter 2 [16] [17] [18] [19] [20] [21] [22] [23] [24] [25]
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[81] [82] [83] [84] [85] [86]
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[87] [88]
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[89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102]
[103] [104] [105] [106] [107] [108] [109] [110]
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 []@texttt # b1850c5cn_doe_polar_merged_0_cesm1_2_0_HD+MAM4+tun2b.hp.e003.cam.h
0.0001-01.nc[] 
[111] [112] [113] [114] [115]
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 [][] 
[116] [117] [118] [119] [120] [121] [122]
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 []      @texttt -s 'prs_sfc_sdn=sqrt((prs_sfc_anm^2).total($time)/($time.size-
1))' \[] 
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 []@texttt ncap2 -s 'prs_sfc_sdn=(prs_sfc-prs_sfc.avg($time)).rmssdn($time)' in
.nc out.nc[] 
[123] [124] [125] [126] [127]
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 []@texttt # tpt_dbl = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 
273.9, 274[] 
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 []@texttt # tpt_flt = 273.1, 273.2, 273.3, 273.4, 273.5, 273.6, 273.7, 273.8, 
273.9, 274[] 
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 []@texttt # Create file with five "ten-month years" (i.e., 50 timesteps) of te
mperature data[] 
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 []@texttt ncrcat -O -v tpt_flt,tpt_dbl -p ~/nco/data in.nc in.nc in.nc in.nc i
n.nc ~/foo.nc[] 
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 []@texttt ncra --flt -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt
h1.nc[] 
[128]
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 []@texttt ncra --dbl -O ~/foo_avg1.nc ~/foo_avg2.nc ~/foo_avg3.nc ~/foo_avg_mt
h1.nc[] 
[129]
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 []@texttt ncap2 -O -s 'TREFHT_dbl=double(TREFHT);area_dbl=double(area)' in.nc 
in.nc[] 
[130] [131] [132]
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 []@texttt ncap2 -s 'tpt=tpt.convert(NC_SHORT);prs=prs.convert(NC_DOUBLE)' in.n
c out.nc[] 
[133] [134]
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[135] [136] [137] [138] [139] Chapter 4
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@texttt "3.9.5" last modified 2008/05/11 built May 12 2008 on neige by
[140] [141] [142] [143]
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 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-h] [--hdf] [--hdr
_pad @textttsl nbr@texttt ] [-L @textttsl dfl_lvl@texttt ] [-l @textttsl path@t
exttt ][] 
[144] [145] [146] [147] [148]
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 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime
nsion)[] 
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 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size 
is fixed[] 
[149] [150]
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 [][] 
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 []@texttt (A) var_out=array(val_srt, val_inc, $dmn_nm);           // One-dimen
sional output[] 
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 []@texttt (B) var_out=array(val_srt, val_inc, var_tpl);           // Multi-dim
ensional output[] 
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 []@texttt (C) var_out=array(val_srt, val_inc, /$dmn1,$dmn2...,$dmnN/); // Mult
i-dimensional output[] 
[151]
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 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24
.5,26.5,28.5[] 
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 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636
, 14.13716 ;[] 
[152] [153] [154] [155]
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[162] [163] [164] [165]
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 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc 
foo.nc[] 
[166] [167]
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 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n
3 type double[] 
[168] [169]
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[]@textrm Consider ir-reg-u-
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[170] [171]
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 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/
nco/data:"[] 
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 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s
rt_map[] 
[172] [173] [174] [175]
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 []@texttt //print("sorted time (ascending order) and associated sort map =\n")
;print(time);print(srt_map);[] 
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 []   @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re
sizes)[] 
[176] [177]
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[181]
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 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min
 && XLONG <= lon_max);[] 
[182]
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 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_
in_x,grid_in_y)[] 
[183] [184] [185] [186]
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 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| 
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 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| 
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@textrm gsl[]sf[]coulomb[]wave[]FGp[]array| 
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@textrm gsl[]sf[]coulomb[]wave[]sphF[]array| 
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@textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| 
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 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)|
 
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@textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]
expr)| 
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 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]Plm[]deriv[]array| 
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 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| 
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@textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| 
[187] [188] [189] [190] [191] [192] [193]
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[]@texttt status=@textbf gsl[]fit[]linear
[194]
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[]@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri
de_w,data_y,stride_
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[]@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_
w,data_y,stride_
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 [][] 
[195]
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 [][] 
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 [][] 
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 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri
de, size_t n, double mean);[] 
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 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s
ize_t stride, size_t n);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si
ze_t stride, size_t n, double f) ;[] 
[196]
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 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m
ean);[] 
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 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st
ride, n, var_mean);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st
ride, n, var_f) ;[] 
[197] [198]
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 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639
02, 7730127, 15531355, 10387694 ;[] 
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 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n
c foo.nc[] 
[199] [200] [201] [202]
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 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text
rm , $@texti e[]$@textrm . Ex-am-ple:
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 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t
extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple:
[203]
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 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl
 x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple:
[204] [205]
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 [][] 
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 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14.
50, 15.00};[] 
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 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05
458, 37.39353, 43.29914, 49.55782 ;[] 
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 []@texttt [-E @textttsl yr_prv@texttt ] [-e @textttsl yr_end@texttt ] [-f @tex
tttsl fml_nm@texttt ] [--fl_fmt=@textttsl fl_fmt@texttt ] [-h @textttsl hst_nm@
texttt ] [-i @textttsl drc_in@texttt ][] 
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utput=drc_out[] 
[220] [221] [222] [223] [224]
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 []@texttt ncclimo --seasons=none ...            # Produce only monthly climos[
] 
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 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN
N[] 
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo -v T,Q,RH -s 1 -e 9 -o $dr
c_out[] 
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 $drc_out < foo[] 
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 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl -
O drc_rgr[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma
p.nc \[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg
r_prv -r map.nc[] 
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r -r map.nc \[] 
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 -N ncclimo[] 
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 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc
climo[] 
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me=ncclimo[] 
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limo \[] 
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 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--ga
g] [--glb ...] [-h] [--hdf] [--hdr_pad @textttsl nbr@texttt ][] 
[239] [240] [241]
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x sfx][] 
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 []@texttt [-F] [--fix_rec_crd] [-G @textttsl gpe_dsc@texttt ] [-g @textttsl gr
p@texttt [,[]]] [--glb ...] [-h] [--hdr_pad @textttsl nbr@texttt ][] 
[245] [246]
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issions.nc[] 
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rec_var[] 
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c[] 
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[] 
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s)[] 
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 packages?)[] 
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conda)[] 
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ian packages?)[] 
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 []@texttt hdp dumpsds ~/in.hdf                        # ncdump/h5dump-equivale
nt for HDF4[] 
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nt for HDF4[] 
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.nc[] 
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 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0.
123456789[] 
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 0.12345678, 0.123456789 ;[] 
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.123 ;[] 
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edrm NcML[] @textrm out-put:
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/' | sort[] 
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 cut -f 11- -d ' ' | sort[] 
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 []@texttt # Change values to be sure original values are not copied in followi
ng step[] 
[265] [266] [267]
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 []@texttt [-R] [-r] [--ram_all] [-t @textttsl thr_nbr@texttt ] [-U] [--unn] [-
v @textttsl var@texttt [,[]]] [-X ...] [-x][] 
[268] [269] [270] [271] [272] [273] [274]
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 []@texttt ncecat -O -u time in.nc out.nc # Create degenerate record dimension 
named "time"[] 
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 []@texttt ncks -O --mk_rec_dmn time in.nc out.nc # Change "time" to record dim
ension[] 
[275]
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 []@texttt [-D @textttsl dbg@texttt ] [-d @textttsl dim@texttt ,[@textttsl min@
texttt ][,[@textttsl max@texttt ][,[@textttsl stride@texttt ][,[@textttsl subcy
cle@texttt ]]]] [-F] [--fl_fmt @textttsl fl_fmt@texttt ][] 
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 []@texttt [-O] [-o @textttsl output-
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 @textttsl file@texttt ] [-p @textttsl path@texttt ] [--ppc ...] [-R] [-r] [--r
am_all] [--rec_apn] [--rth_dbl|flt][] 
[276] [277] [278]
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 []@texttt [-D @textttsl dbg@texttt ] [-d @textttsl dim@texttt ,[@textttsl min@
texttt ][,[@textttsl max@texttt ][,[@textttsl stride@texttt ][,[@textttsl subcy
cle@texttt ]]]] [-F] [--fl_fmt @textttsl fl_fmt@texttt ][] 
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[279] [280]
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 []@texttt [--msk_dst=@textttsl msk_dst@texttt ] [--msk_out=@textttsl msk_out@t
exttt ] [--msk_src=@textttsl msk_src@texttt ] [--mss_val=@textttsl mss_val@text
tt ][] 
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[283]
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nc[] 
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nc[] 
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p.nc[] 
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 []@texttt ....Try swapping order of mesh A and B, or override with --allow_no_
overlap[] 
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 []@texttt ncremap -V var_rgr -i in.nc -d dst.nc -O ~/rgr # CF coordinates conv
ention[] 
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 []@texttt ncremap -R "--rgr lat_nm=xq --rgr lon_nm=zj" -i in.nc -d dst.nc -O ~
/rgr # Manual[] 
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pas_ncpdq.nc[] 
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nc -O ~/rgr[] 
[296] [297] [298] [299] [300]
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 []@texttt [--glb ...] [-h] [--hdf] [--hdr_pad @textttsl nbr@texttt ] [-l @text
ttsl path@texttt ] [-O] [-o @textttsl output-
[301] [302] [303]
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 []@texttt ncwa [-3] [-4] [-5] [-6] [-7] [-A] [-a @textttsl dim@texttt [,[]]] [
-B @textttsl mask_cond@texttt ] [-b] [-C] [-c][] 
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[307] [308] [309] [310] Chapter 5 [311] [312] [313] [314] [315] Chapter 6
[316] [317] Chapter 7 [318] (/builddir/build/BUILD/nco-4.7.5/doc/xmp/cmb_fl.sh
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[323]) </builddir/build/BUILD/nco-4.7.5/doc/xmp/fgr1.png> [324]
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[326]) </builddir/build/BUILD/nco-4.7.5/doc/xmp/fgr2.png> [327] [328]
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Chapter 9 [345] [346]
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[352] Chapter 10 [353] [354] (General Index) [355] [356] (./nco.cps [357]
[358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369]
[370] [371] [372] [373] [374]) [375] [376] )
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[-4]) [-5] [-6] (./nco.toc) (./nco.toc) (Foreword) [1] (Summary) [2] [3]
[4] Chapter 1 [5] [6] [7] [8] [9] [10] [11] [12]
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[13] [14] [15] Chapter 2 [16] [17] [18] [19] [20] [21] [22] [23] [24] [25]
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[135] [136] [137] [138] [139] Chapter 4
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 []@texttt [-D @textttsl dbg@texttt ] [-F] [-f] [--glb ...] [-h] [--hdf] [--hdr
_pad @textttsl nbr@texttt ] [-L @textttsl dfl_lvl@texttt ] [-l @textttsl path@t
exttt ][] 
[144] [145] [146] [147] [148]
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 []@texttt defdim("cnt",10,NC_UNLIMITED); # Dimension is unlimited (record dime
nsion)[] 
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 []@texttt defdim("cnt",10,737); # All non-zero values indicate dimension size 
is fixed[] 
[149] [150]
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 [][] 
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 []@texttt (A) var_out=array(val_srt, val_inc, $dmn_nm);           // One-dimen
sional output[] 
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 []@texttt (B) var_out=array(val_srt, val_inc, var_tpl);           // Multi-dim
ensional output[] 
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 []@texttt (C) var_out=array(val_srt, val_inc, /$dmn1,$dmn2...,$dmnN/); // Mult
i-dimensional output[] 
[151]
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 []@texttt var_out=array(10.0,2,$time) // 10.5,12.5,14.5,16.5,18.5,20.5,22.5,24
.5,26.5,28.5[] 
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 []@texttt // 3.14159, 4.712385, 6.28318, 7.853975, 9.42477, 10.99557, 12.56636
, 14.13716 ;[] 
[152] [153] [154] [155]
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 [][] 
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 [][] 
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 [][] 
[158] [159] [160]
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 [][] 
[161]
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 [][] 
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 [][] 
[162] [163] [164] [165]
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 []@texttt ncap2 -v -O -s 'rec_pck=pack(three_dmn_rec_var,-0.001,40.0);' in.nc 
foo.nc[] 
[166] [167]
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 []@texttt n3=1/(three_dmn_var_dbl.cos().pow(2))-tan(three_dmn_var_dbl)^2; // n
3 type double[] 
[168] [169]
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[]@textrm Consider ir-reg-u-
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 [][] 
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 [][] 
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[170] [171]
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 []@texttt export NCO_PATH=":/home/henryb/bin/:/usr/local/scripts:/opt/SOURCES/
nco/data:"[] 
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 []@texttt dsr_map=invert_map(srt_map); // Produce "de-sort" map that inverts s
rt_map[] 
[172] [173] [174] [175]
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 []@texttt //print("sorted time (ascending order) and associated sort map =\n")
;print(time);print(srt_map);[] 
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 []   @texttt 4. Add the 1-d sort map to the 3-d sort map (NCO automatically re
sizes)[] 
[176] [177]
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[179]
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 [][] 
[181]
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 [][] 
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 []@texttt mask_var = (XLAT >= lat_min && XLAT <= lat_max) && (XLONG >= lon_min
 && XLONG <= lon_max);[] 
[182]
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 []@texttt var_out=bilinear_interp(grid_in,grid_out,grid_out_x,grid_out_y,grid_
in_x,grid_in_y)[] 
[183] [184] [185] [186]
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 @textrm status=gsl[]sf[]bessel[]Jn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]In[]array(int,int,double,&var[]out)| 
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 @textrm staus=gsl[]sf[]bessel[]In[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]Kn[]scaled[]array(int,int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]il[]scaled[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]bessel[]kl[]scaled[]array(int,double,&var[]out)| 
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@textrm gsl[]sf[]coulomb[]wave[]FGp[]array| 
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@textrm gsl[]sf[]coulomb[]wave[]sphF[]array| 
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@textrm gsl[]sf[]coupling[]6j[]INCORRECT[]e| 
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 @textrm gsl[]sf[]ellint[]RJ(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)| 
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 @textrm gsl[]sf[]hyperg[]2F1[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]expr)|
 
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@textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm[]e| 
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 @textrm gsl[]sf[]hyperg[]2F1[]conj[]renorm(dbl[]expr,dbl[]expr,dbl[]expr,dbl[]
expr)| 
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 @textrm status=gsl[]sf[]legendre[]Pl[]array(int,double,&var[]out)| 
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 @textrm status=gsl[]sf[]legendre[]Plm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]Plm[]deriv[]array| 
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 @textrm status=gsl[]sf[]legendre[]sphPlm[]array(int,int,double,&var[]out)| 
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@textrm gsl[]sf[]legendre[]sphPlm[]deriv[]array| 
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@textrm gsl[]sf[]angle[]restrict[]symm[]err[]e| 
[187] [188] [189] [190] [191] [192] [193]
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[]@texttt status=@textbf gsl[]fit[]linear
[194]
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[]@texttt status= @textbf gsl[]fit[]wlinear@texttt (data_x,stride_x,data_w,stri
de_w,data_y,stride_
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[]@texttt status= @textbf gsl[]fit[]wmul@texttt (data_x,stride_x,data_w,stride_
w,data_y,stride_
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 [][] 
[195]
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 [][] 
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 [][] 
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 []@texttt double gsl_stats_short_sd_with_fixed_mean (short data[], size_t stri
de, size_t n, double mean);[] 
Overfull \hbox (124.16682pt too wide) in paragraph at lines 15224--15224
 []@texttt double gsl_stats_wmean (double w[], size_t wstride, double data[], s
ize_t stride, size_t n);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (double sorted_data[], si
ze_t stride, size_t n, double f) ;[] 
[196]
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 []@texttt double gsl_stats_sd_with_fixed_mean (var_data, data_stride, n, var_m
ean);[] 
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 []@texttt double gsl_stats_wmean (var_weight, weight_stride, var_data, data_st
ride, n, var_mean);[] 
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 []@texttt double gsl_stats_quantile_from_sorted_data (var_sorted_data, data_st
ride, n, var_f) ;[] 
[197] [198]
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 []@texttt // a2=9056646, 12776696, 1011656, 13354708, 5139066, 1388751, 111639
02, 7730127, 15531355, 10387694 ;[] 
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 []@texttt ncap2 -v -O -s 'a1[time]=21;a2=gsl_rng_uniform_int(a1).sort();' in.n
c foo.nc[] 
[199] [200] [201] [202]
Underfull \hbox (badness 10000) in paragraph at lines 15865--15881
 @texttt exp(x)[]@textsl Exponential @textrm Ex-po-nen-tial of @textsl x[]@text
rm , $@texti e[]$@textrm . Ex-am-ple:
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 @texttt ln(x)[]@textsl Natural Log-a-rithm @textrm Nat-u-ral log-a-rithm of @t
extsl x[]@textrm , $[](@texti x@textrm )$. Ex-am-ple:
[203]
Underfull \hbox (badness 10000) in paragraph at lines 16011--16021
 @texttt sin(x)[]@textsl Sine @textrm Sine of @textsl x[] @textrm where @textsl
 x[] @textrm is spec-i-fied in ra-di-ans. Ex-am-ple:
[204] [205]
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 [][] 
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 [][] 
[206]
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 []@texttt my_time[time]={10.50, 11.0, 11.50, 12.0, 12.5, 13.0, 13.5, 14.0, 14.
50, 15.00};[] 
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 []@texttt // 32.05428, 27.61159, 24.55934, 23.45467, 24.55947, 27.61184, 32.05
458, 37.39353, 43.29914, 49.55782 ;[] 
[207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218]
[219]
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 []@texttt [-E @textttsl yr_prv@texttt ] [-e @textttsl yr_end@texttt ] [-f @tex
tttsl fml_nm@texttt ] [--fl_fmt=@textttsl fl_fmt@texttt ] [-h @textttsl hst_nm@
texttt ] [-i @textttsl drc_in@texttt ][] 
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 []@texttt ncclimo --case=caseid --start=srt_yr --end=end_yr --input=drc_in --o
utput=drc_out[] 
[220] [221] [222] [223] [224]
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 []@texttt ncclimo --seasons=none ...            # Produce only monthly climos[
] 
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 []@texttt ncclimo --seasons=mam,jja,son,djf ... # Monthly + MAM,JJA,SON,DJF,AN
N[] 
[225] [226]
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc | ncclimo -v T,Q,RH -s 1 -e 9 -o $dr
c_out[] 
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 []@texttt cd $drc_in;ls *mdl*000[1-9]*.nc > foo;ncclimo -v T,Q,RH -s 1 -e 9 -o
 $drc_out < foo[] 
[227]
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 [][] 
[228]
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 []@texttt ncclimo -c amip_xpt -s 1980 -e 1983 -i drc_in -o drc_out -r map_fl -
O drc_rgr[] 
[229]
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 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1980 -e 1981 -i raw -o clm -
[230]
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 []@texttt ncclimo -v FSNT,AODVIS -c ca-seid -s 1982 -e 1983 -i raw -o clm -
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -r ma
p.nc \[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1980 -e 1981 -i raw -o prv -O rg
r_prv -r map.nc[] 
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 []@texttt ncclimo -v FSNT,AODVIS -c caseid -s 1982 -e 1983 -i raw -o clm -O rg
r -r map.nc \[] 
[231]
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 [][] 
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[232]
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 []@texttt qsub -I -A CLI115 -V -l nodes=1 -l walltime=00:10:00 -lpartition=gpu
 -N ncclimo[] 
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 []@texttt qsub -I -A HiRes_EarthSys --nodecount=1 --time=00:10:00 --jobname=nc
climo[] 
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 []@texttt salloc  -A acme --nodes=1 --partition=debug --time=00:10:00 --job-na
me=ncclimo[] 
[233]
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 [][] 
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 []@texttt qsub -A CLI115 -V -l nodes=12 -l walltime=00:30:00 -j oe -m e -N ncc
limo \[] 
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 [][] 
[234]
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[235] [236]
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 [][] 
[237] [238]
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 []@texttt [-G @textttsl gpe_dsc@texttt ] [-g @textttsl grp@texttt [,[]]] [--ga
g] [--glb ...] [-h] [--hdf] [--hdr_pad @textttsl nbr@texttt ][] 
[239] [240] [241]
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 []@texttt [--no_cll_msr] [--no_frm_trm] [--no_tmp_fl] [--nsm_fl|grp] [--nsm_sf
x sfx][] 
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 []@texttt [-O] [-o @textttsl output-
[242] [243] [244]
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 []@texttt [-F] [--fix_rec_crd] [-G @textttsl gpe_dsc@texttt ] [-g @textttsl gr
p@texttt [,[]]] [--glb ...] [-h] [--hdr_pad @textttsl nbr@texttt ][] 
[245] [246]
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 []@texttt ncflint --fix_rec_crd -w 0.8,0.0 emissions.nc emissions.nc scaled_em
issions.nc[] 
[247] [248] [249]
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 []@texttt % ncks -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.nc[]
 
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 []@texttt % ls -l bnr.dat | cut -d ' ' -f 5 # 200 B contains time and one_dmn_
rec_var[] 
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 []@texttt % ncks -C -O -v one_dmn_rec_var -b bnr.dat -p ~/nco/data in.nc out.n
c[] 
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 []@texttt % ls -l bnr.dat | cut -d ' ' -f # 40 B contains one_dmn_rec_var only
[] 
[250] [251]
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 [][] 
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 [][] 
[252]
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 []@texttt /usr/hdf4/bin/ncgen -b -o ~/in.hdf ~/in.cdl # HDF ncgen (local build
s)[] 
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 []@texttt /usr/bin/hncgen     -b -o ~/in.hdf ~/in.cdl # Same as HDF ncgen (RPM
 packages?)[] 
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 []@texttt /usr/bin/h4_ncgen   -b -o ~/in.hdf ~/in.cdl # Same as HDF ncgen (Ana
conda)[] 
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 []@texttt /usr/bin/ncgen-hdf  -b -o ~/in.hdf ~/in.cdl # Same as HDF ncgen (Deb
ian packages?)[] 
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 []@texttt hdp dumpsds ~/in.hdf                        # ncdump/h5dump-equivale
nt for HDF4[] 
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 []@texttt h4_ncdump dumpsds ~/in.hdf                  # ncdump/h5dump-equivale
nt for HDF4[] 
[253]
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 []@texttt % ncks --trd -H -d lat,90.0 -d lev,1000.0 -v three_dmn_var in.nc out
.nc[] 
[254]
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[255]
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[256]
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[257] [258]
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[259]
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 []@texttt # 0.0,0.1,0.12,0.123,0.1234,0.12345,0.123456,0.1234567,0.12345678,0.
123456789[] 
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 []@texttt ppc_dbl = 0, 0.1, 0.12, 0.123, 0.1234, 0.12345, 0.123456, 0.1234567,
 0.12345678, 0.123456789 ;[] 
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 []@texttt ppc_dbl = 0., 0.1, 0.12, 0.123, 0.123, 0.123, 0.123, 0.123, 0.123, 0
.123 ;[] 
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 [][] 
[260]
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 [][] 
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 [][] 
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 []@texttt ncks[] @textrm pro-vides ad-di-tional op-tions to con-fig-ure @reduc
edrm NcML[] @textrm out-put:
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[307] [308] [309] [310] Chapter 5 [311] [312] [313] [314] [315] Chapter 6
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[323]) </builddir/build/BUILD/nco-4.7.5/doc/xmp/fgr1.png> [324]
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Chapter 9 [345] [346]
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[352] Chapter 10 [353] [354] (General Index) [355] [356] (./nco.cps [357]
[358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369]
[370] [371] [372] [373] [374]) [375] [376] )
(see the transcript file for additional information)</usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmb10.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/public/amsfonts/cm/cmbx12.pfb></usr/share/texlive/texmf-dist/fonts/typ
e1/public/amsfonts/cm/cmex10.pfb></usr/share/texlive/texmf-dist/fonts/type1/pub
lic/amsfonts/cm/cmmi10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/am
sfonts/cm/cmmi12.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts
/cm/cmmi7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmm
i9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr10.pfb>
</usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/sh
are/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr9.pfb></usr/share/texlive/texm
f-dist/fonts/type1/public/amsfonts/cm/cmsl10.pfb></usr/share/texlive/texmf-dist
/fonts/type1/public/amsfonts/cm/cmsl9.pfb></usr/share/texlive/texmf-dist/fonts/
type1/public/amsfonts/cm/cmsltt10.pfb></usr/share/texlive/texmf-dist/fonts/type
1/public/amsfonts/cm/cmsy10.pfb></usr/share/texlive/texmf-dist/fonts/type1/publ
ic/amsfonts/cm/cmsy7.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsf
onts/cm/cmsy9.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm
/cmti10.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti8
.pfb></usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti9.pfb></
usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt10.pfb></usr/sh
are/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt12.pfb></usr/share/te
xlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmtt9.pfb></usr/share/texlive/t
exmf-dist/fonts/type1/public/amsfonts/latxfont/lcircle1.pfb>
Output written on nco.pdf (384 pages, 1613229 bytes).
Transcript written on nco.log.
make: Leaving directory `/builddir/build/BUILD/nco-4.7.5/doc'
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.X4iRV2
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm
++ dirname /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm
+ cd nco-4.7.5
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm
Making install in data
make[1]: Entering directory `/builddir/build/BUILD/nco-4.7.5/data'
make[2]: Entering directory `/builddir/build/BUILD/nco-4.7.5/data'
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make[2]: Nothing to be done for `install-data-am'.
make[2]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/data'
make[1]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/data'
Making install in src
make[1]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src'
Making install in nco
make[2]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src/nco'
make[3]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src/nco'
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 /bin/sh ../../libtool --tag=CXX   --mode=install /usr/bin/install -c   libnco.la '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib'
libtool: install: /usr/bin/install -c .libs/libnco-4.7.5.so /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco-4.7.5.so
libtool: install: (cd /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib && { ln -s -f libnco-4.7.5.so libnco.so || { rm -f libnco.so && ln -s libnco-4.7.5.so libnco.so; }; })
libtool: install: /usr/bin/install -c .libs/libnco.lai /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco.la
libtool: install: /usr/bin/install -c .libs/libnco.a /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco.a
libtool: install: chmod 644 /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco.a
libtool: install: ranlib /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco.a
libtool: install: warning: remember to run `libtool --finish /usr/lib'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin'
  /bin/sh ../../libtool --tag=CXX   --mode=install /usr/bin/install -c ncatted ncbo ncecat ncflint ncks ncpdq ncra ncrename ncwa '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin'
libtool: install: warning: `libnco.la' has not been installed in `/usr/lib'
libtool: install: /usr/bin/install -c .libs/ncatted /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncatted
libtool: install: warning: `libnco.la' has not been installed in `/usr/lib'
libtool: install: /usr/bin/install -c .libs/ncbo /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncbo
libtool: install: warning: `libnco.la' has not been installed in `/usr/lib'
libtool: install: /usr/bin/install -c .libs/ncecat /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncecat
libtool: install: warning: `libnco.la' has not been installed in `/usr/lib'
libtool: install: /usr/bin/install -c .libs/ncflint /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncflint
libtool: install: warning: `libnco.la' has not been installed in `/usr/lib'
libtool: install: /usr/bin/install -c .libs/ncks /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncks
libtool: install: warning: `libnco.la' has not been installed in `/usr/lib'
libtool: install: /usr/bin/install -c .libs/ncpdq /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncpdq
libtool: install: warning: `libnco.la' has not been installed in `/usr/lib'
libtool: install: /usr/bin/install -c .libs/ncra /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncra
libtool: install: warning: `libnco.la' has not been installed in `/usr/lib'
libtool: install: /usr/bin/install -c .libs/ncrename /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncrename
libtool: install: warning: `libnco.la' has not been installed in `/usr/lib'
libtool: install: /usr/bin/install -c .libs/ncwa /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncwa
/usr/bin/make  install-exec-hook
make[4]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src/nco'
cd /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin && ln -s -f ncbo ncdiff || (rm -f ncdiff && ln -s -f ncbo ncdiff)
cd /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin && ln -s -f ncra ncea || (rm -f ncea && ln -s -f ncra ncea)
cd /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin && ln -s -f ncra nces || (rm -f nces && ln -s -f ncra nces)
cd /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin && ln -s -f ncra ncrcat || (rm -f ncrcat && ln -s -f ncra ncrcat)
make[4]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/src/nco'
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/src/nco'
make[2]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/src/nco'
Making install in nco_c++
make[2]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src/nco_c++'
make[3]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src/nco_c++'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib'
 /bin/sh ../../libtool --tag=CXX   --mode=install /usr/bin/install -c   libnco_c++.la '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib'
libtool: install: /usr/bin/install -c .libs/libnco_c++-4.7.5.so /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco_c++-4.7.5.so
libtool: install: (cd /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib && { ln -s -f libnco_c++-4.7.5.so libnco_c++.so || { rm -f libnco_c++.so && ln -s libnco_c++-4.7.5.so libnco_c++.so; }; })
libtool: install: /usr/bin/install -c .libs/libnco_c++.lai /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco_c++.la
libtool: install: /usr/bin/install -c .libs/libnco_c++.a /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco_c++.a
libtool: install: chmod 644 /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco_c++.a
libtool: install: ranlib /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco_c++.a
libtool: install: warning: remember to run `libtool --finish /usr/lib'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/include/nco'
 /usr/bin/install -c -m 644 libnco_c++.hh nco_dmn.hh nco_hgh.hh nco_var.hh nco_att.hh nco_fl.hh nco_utl.hh '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/include/nco'
make[3]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/src/nco_c++'
make[2]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/src/nco_c++'
Making install in nco++
make[2]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src/nco++'
make[3]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src/nco++'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin'
  /bin/sh ../../libtool --tag=CXX   --mode=install /usr/bin/install -c ncap2 '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin'
libtool: install: warning: `/builddir/build/BUILD/nco-4.7.5/src/nco/libnco.la' has not been installed in `/usr/lib'
libtool: install: /usr/bin/install -c .libs/ncap2 /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncap2
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/src/nco++'
make[2]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/src/nco++'
make[2]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src'
make[3]: Entering directory `/builddir/build/BUILD/nco-4.7.5/src'
make[3]: Nothing to be done for `install-exec-am'.
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/src'
make[2]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/src'
make[1]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/src'
Making install in man
make[1]: Entering directory `/builddir/build/BUILD/nco-4.7.5/man'
make[2]: Entering directory `/builddir/build/BUILD/nco-4.7.5/man'
make[2]: Nothing to be done for `install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/man/man1'
 /usr/bin/install -c -m 644 ncap2.1 ncatted.1 ncbo.1 ncclimo.1 nces.1 ncecat.1 ncflint.1 ncks.1 nco.1 ncra.1 ncremap.1 ncrename.1 ncpdq.1 ncrcat.1 ncwa.1 '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/man/man1'
make[2]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/man'
make[1]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/man'
Making install in doc
make[1]: Entering directory `/builddir/build/BUILD/nco-4.7.5/doc'
make[2]: Entering directory `/builddir/build/BUILD/nco-4.7.5/doc'
make[2]: Nothing to be done for `install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/info'
 /usr/bin/install -c -m 644 ./nco.info ./nco.info-1 ./nco.info-2 ./nco.info-3 ./nco.info-4 '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/info'
 install-info --info-dir='/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/info' '/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/info/nco.info'
make[2]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/doc'
make[1]: Leaving directory `/builddir/build/BUILD/nco-4.7.5/doc'
make[1]: Entering directory `/builddir/build/BUILD/nco-4.7.5'
make[2]: Entering directory `/builddir/build/BUILD/nco-4.7.5'
make[2]: Nothing to be done for `install-exec-am'.
make[2]: Nothing to be done for `install-data-am'.
make[2]: Leaving directory `/builddir/build/BUILD/nco-4.7.5'
make[1]: Leaving directory `/builddir/build/BUILD/nco-4.7.5'
+ rm /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco.la /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco_c++.la
+ rm -f /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/info/dir
+ chrpath -d -k /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncap2 /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncatted /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncbo /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncclimo /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncdiff /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncea /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncecat /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/nces /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncflint /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncks /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncpdq /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncra /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncrcat /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncremap /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncrename /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncwa
`/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncclimo' probably isn't an ELF file.
elf_open: Exec format error
`/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncremap' probably isn't an ELF file.
elf_open: Exec format error
+ :
+ /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 /builddir/build/BUILD/nco-4.7.5
extracting debug info from /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncks
extracting debug info from /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncra
extracting debug info from /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncrename
extracting debug info from /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncap2
extracting debug info from /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncatted
extracting debug info from /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncecat
extracting debug info from /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncbo
extracting debug info from /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncpdq
extracting debug info from /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncflint
extracting debug info from /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/bin/ncwa
extracting debug info from /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco_c++-4.7.5.so
extracting debug info from /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/lib/libnco-4.7.5.so
/usr/lib/rpm/sepdebugcrcfix: Updated 12 CRC32s, 0 CRC32s did match.
symlinked /usr/lib/debug/usr/bin/ncra.debug to /usr/lib/debug/usr/bin/nces.debug
symlinked /usr/lib/debug/usr/bin/ncra.debug to /usr/lib/debug/usr/bin/ncrcat.debug
symlinked /usr/lib/debug/usr/bin/ncbo.debug to /usr/lib/debug/usr/bin/ncdiff.debug
symlinked /usr/lib/debug/usr/bin/ncra.debug to /usr/lib/debug/usr/bin/ncea.debug
symlinked /usr/lib/debug/usr/lib/libnco-4.7.5.so.debug to /usr/lib/debug/usr/lib/libnco.so.debug
symlinked /usr/lib/debug/usr/lib/libnco_c++-4.7.5.so.debug to /usr/lib/debug/usr/lib/libnco_c++.so.debug
cpio: nco-4.7.5/src/nco/ncap_yacc.h: Cannot stat: No such file or directory
cpio: nco-4.7.5/src/nco/ncap_yacc.y: Cannot stat: No such file or directory
10579 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-java-repack-jars
Processing files: nco-4.7.5-2.el7.armv7hl
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.1b4FQH
+ umask 022
+ cd /builddir/build/BUILD
+ cd nco-4.7.5
+ DOCDIR=/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ cp -pr doc/README /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ cp -pr doc/rtfm.txt /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ cp -pr doc/nco.html /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ cp -pr doc/nco.pdf /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ cp -pr doc/nco.css /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ cp -pr doc/index.shtml /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ cp -pr doc/TODO /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ cp -pr doc/ChangeLog /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ cp -pr doc/nco.png /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ cp -pr doc/nco_news.shtml /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ cp -pr doc/nsf.png /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/doc/nco-4.7.5
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ZX5bPC
+ umask 022
+ cd /builddir/build/BUILD
+ cd nco-4.7.5
+ LICENSEDIR=/builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/licenses/nco-4.7.5
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/licenses/nco-4.7.5
+ cp -pr doc/LICENSE /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm/usr/share/licenses/nco-4.7.5
+ exit 0
Provides: libnco-4.7.5.so libnco_c++-4.7.5.so nco = 4.7.5-2.el7 nco(armv7hl-32) = 4.7.5-2.el7
Requires(interp): /bin/sh /bin/sh
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires(post): /bin/sh
Requires(postun): /bin/sh
Requires: /bin/bash ld-linux-armhf.so.3 ld-linux-armhf.so.3(GLIBC_2.4) libc.so.6 libc.so.6(GLIBC_2.4) libc.so.6(GLIBC_2.7) libcurl.so.4 libgcc_s.so.1 libgcc_s.so.1(GCC_3.0) libgcc_s.so.1(GCC_3.3.1) libgcc_s.so.1(GCC_3.5) libgomp.so.1 libgomp.so.1(GOMP_1.0) libgomp.so.1(OMP_1.0) libgsl.so.0 libgslcblas.so.0 libm.so.6 libm.so.6(GLIBC_2.4) libnco-4.7.5.so libnetcdf.so.7 libpthread.so.0 libpthread.so.0(GLIBC_2.4) libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_ARM_1.3.3) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.9) libudunits2.so.0 rtld(GNU_HASH)
Processing files: nco-devel-4.7.5-2.el7.armv7hl
Provides: nco-devel = 4.7.5-2.el7 nco-devel(armv7hl-32) = 4.7.5-2.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: nco-static-4.7.5-2.el7.armv7hl
Provides: nco-static = 4.7.5-2.el7 nco-static(armv7hl-32) = 4.7.5-2.el7
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: nco-debuginfo-4.7.5-2.el7.armv7hl
Provides: nco-debuginfo = 4.7.5-2.el7 nco-debuginfo(armv7hl-32) = 4.7.5-2.el7
Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm
Wrote: /builddir/build/RPMS/nco-4.7.5-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/nco-devel-4.7.5-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/nco-static-4.7.5-2.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/nco-debuginfo-4.7.5-2.el7.armv7hl.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.KPF3hV
+ umask 022
+ cd /builddir/build/BUILD
+ cd nco-4.7.5
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/nco-4.7.5-2.el7.arm
+ exit 0
Child return code was: 0