Mock Version: 1.2.13
ENTER do(['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target armv7hl --nodeps /builddir/build/SPECS/clipper.spec'], chrootPath='/var/lib/mock/epel-1-armhfp-ecc92073942c1aead25e90d9ac025d9d54252656/root'shell=FalseprintOutput=Falseenv={'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'HOSTNAME': 'mock'}gid=135user='mockbuild'timeout=0logger=<mockbuild.trace_decorator.getLog object at 0x333ef0>uid=996)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target armv7hl --nodeps /builddir/build/SPECS/clipper.spec'] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'HOSTNAME': 'mock'} and shell False
Building target platforms: armv7hl
Building for target armv7hl
Wrote: /builddir/build/SRPMS/clipper-2.1-26.20140911.el7.src.rpm
Child return code was: 0
LEAVE do --> 

ENTER do(['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target armv7hl --nodeps  /builddir/build/SPECS/clipper.spec '], chrootPath='/var/lib/mock/epel-1-armhfp-ecc92073942c1aead25e90d9ac025d9d54252656/root'shell=Falseuid=996env={'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'HOSTNAME': 'mock'}gid=135user='mockbuild'timeout=0private_network=Truelogger=<mockbuild.trace_decorator.getLog object at 0x333ef0>printOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target armv7hl --nodeps  /builddir/build/SPECS/clipper.spec '] with env {'LANG': 'en_US.UTF-8', 'TERM': 'vt100', 'SHELL': '/bin/bash', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'HOME': '/builddir', 'HOSTNAME': 'mock'} and shell False
Building target platforms: armv7hl
Building for target armv7hl
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.bahDYR
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf clipper-2.1.20140911
+ /usr/bin/gzip -dc /builddir/build/SOURCES/clipper-2.1.20140911.tar.gz
+ /usr/bin/tar -xf -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd clipper-2.1.20140911
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ echo 'Patch #0 (clipper-pkgconfig.patch):'
Patch #0 (clipper-pkgconfig.patch):
+ /usr/bin/cat /builddir/build/SOURCES/clipper-pkgconfig.patch
+ /usr/bin/patch -p0 --fuzz=0
patching file clipper.pc.in
+ sed -i 's/\r//' dox/coordtypes.dox
+ sed -i 's/\r//' dox/develop.dox
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Us2hOO
+ umask 022
+ cd /builddir/build/BUILD
+ cd clipper-2.1.20140911
+ CFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -I/usr/lib/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro '
+ export LDFLAGS
+ '[' 1 == 1 ']'
+ '[' arm == ppc64le ']'
++ find . -name config.guess -o -name config.sub
+ for i in '$(find . -name config.guess -o -name config.sub)'
++ basename ./build-aux/config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./build-aux/config.sub
++ basename ./build-aux/config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./build-aux/config.sub
'/usr/lib/rpm/redhat/config.sub' -> './build-aux/config.sub'
+ for i in '$(find . -name config.guess -o -name config.sub)'
++ basename ./build-aux/config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./build-aux/config.guess
++ basename ./build-aux/config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./build-aux/config.guess
'/usr/lib/rpm/redhat/config.guess' -> './build-aux/config.guess'
+ ./configure --build=armv7hl-redhat-linux-gnu --host=armv7hl-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info --enable-contrib --enable-phs --enable-cns --enable-mmdb --enable-minimol --enable-cif --enable-ccp4 --enable-fortran --enable-shared --disable-static
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for armv7hl-redhat-linux-gnu-gcc... no
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for style of include used by make... GNU
checking dependency style of gcc... none
checking for armv7hl-redhat-linux-gnu-g++... no
checking for armv7hl-redhat-linux-gnu-c++... no
checking for armv7hl-redhat-linux-gnu-gpp... no
checking for armv7hl-redhat-linux-gnu-aCC... no
checking for armv7hl-redhat-linux-gnu-CC... no
checking for armv7hl-redhat-linux-gnu-cxx... no
checking for armv7hl-redhat-linux-gnu-cc++... no
checking for armv7hl-redhat-linux-gnu-cl.exe... no
checking for armv7hl-redhat-linux-gnu-FCC... no
checking for armv7hl-redhat-linux-gnu-KCC... no
checking for armv7hl-redhat-linux-gnu-RCC... no
checking for armv7hl-redhat-linux-gnu-xlC_r... no
checking for armv7hl-redhat-linux-gnu-xlC... no
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking dependency style of g++... none
checking for armv7hl-redhat-linux-gnu-ar... no
checking for armv7hl-redhat-linux-gnu-lib... no
checking for armv7hl-redhat-linux-gnu-link... no
checking for ar... ar
checking the archiver (ar) interface... ar
checking build system type... armv7hl-redhat-linux-gnu
checking host system type... armv7hl-redhat-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert armv7hl-redhat-linux-gnu file names to armv7hl-redhat-linux-gnu format... func_convert_file_noop
checking how to convert armv7hl-redhat-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for armv7hl-redhat-linux-gnu-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for armv7hl-redhat-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for armv7hl-redhat-linux-gnu-ar... ar
checking for archiver @FILE support... @
checking for armv7hl-redhat-linux-gnu-strip... no
checking for strip... strip
checking for armv7hl-redhat-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for armv7hl-redhat-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fPIC -DPIC
checking if g++ PIC flag -fPIC -DPIC works... yes
checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether to enable maintainer-specific portions of Makefiles... no
checking for armv7hl-redhat-linux-gnu-g77... no
checking for armv7hl-redhat-linux-gnu-xlf... no
checking for armv7hl-redhat-linux-gnu-f77... no
checking for armv7hl-redhat-linux-gnu-frt... no
checking for armv7hl-redhat-linux-gnu-pgf77... no
checking for armv7hl-redhat-linux-gnu-cf77... no
checking for armv7hl-redhat-linux-gnu-fort77... no
checking for armv7hl-redhat-linux-gnu-fl32... no
checking for armv7hl-redhat-linux-gnu-af77... no
checking for armv7hl-redhat-linux-gnu-xlf90... no
checking for armv7hl-redhat-linux-gnu-f90... no
checking for armv7hl-redhat-linux-gnu-pgf90... no
checking for armv7hl-redhat-linux-gnu-pghpf... no
checking for armv7hl-redhat-linux-gnu-epcf90... no
checking for armv7hl-redhat-linux-gnu-gfortran... no
checking for armv7hl-redhat-linux-gnu-g95... no
checking for armv7hl-redhat-linux-gnu-xlf95... no
checking for armv7hl-redhat-linux-gnu-f95... no
checking for armv7hl-redhat-linux-gnu-fort... no
checking for armv7hl-redhat-linux-gnu-ifort... no
checking for armv7hl-redhat-linux-gnu-ifc... no
checking for armv7hl-redhat-linux-gnu-efc... no
checking for armv7hl-redhat-linux-gnu-pgfortran... no
checking for armv7hl-redhat-linux-gnu-pgf95... no
checking for armv7hl-redhat-linux-gnu-lf95... no
checking for armv7hl-redhat-linux-gnu-ftn... no
checking for armv7hl-redhat-linux-gnu-nagfor... no
checking for g77... no
checking for xlf... no
checking for f77... no
checking for frt... no
checking for pgf77... no
checking for cf77... no
checking for fort77... no
checking for fl32... no
checking for af77... no
checking for xlf90... no
checking for f90... no
checking for pgf90... no
checking for pghpf... no
checking for epcf90... no
checking for gfortran... gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... no
checking if gfortran supports -c -o file.o... yes
checking if gfortran supports -c -o file.o... (cached) yes
checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... (cached) GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking how to get verbose linking output from gfortran... -v
checking for Fortran 77 libraries of gfortran...  -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lgfortran -lm
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore
checking for library containing cos... -lm
checking for prefixed single-precision FFTW2 (sfftw.h)... yes
checking for the pthreads library -lpthreads... no
checking for the pthreads library -lpthread... yes
checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
checking if more special flags are required for pthreads... no
checking for PTHREAD_PRIO_INHERIT... yes
checking for MMDB_CCIF_Init in -lmmdb2... yes
checking mmdb2/mmdb_manager.h usability... yes
checking mmdb2/mmdb_manager.h presence... yes
checking for mmdb2/mmdb_manager.h... yes
checking for ccp4_banner in -lccp4c... yes
checking ccp4/ccp4_general.h usability... yes
checking ccp4/ccp4_general.h presence... yes
checking for ccp4/ccp4_general.h... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating clipper/Makefile
config.status: creating clipper/core/Makefile
config.status: creating clipper/contrib/Makefile
config.status: creating examples/Makefile
config.status: creating clipper.pc
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
       
        Configuration Summary
 ------------------------------
core:          yes
contrib:       yes
phs:           yes
cns:           yes
mmdb:          yes
minimol:       yes
cif:           yes
ccp4:          yes
cctbx:         no
fortran:       yes
 
+ make -j4
make  all-recursive
make[1]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911'
Making all in clipper
make[2]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper'
Making all in core
make[3]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper/core'
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-atomsf.lo `test -f 'atomsf.cpp' || echo './'`atomsf.cpp
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-coords.lo `test -f 'coords.cpp' || echo './'`coords.cpp
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-nxmap_operator.lo `test -f 'nxmap_operator.cpp' || echo './'`nxmap_operator.cpp
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-cell.lo `test -f 'cell.cpp' || echo './'`cell.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nxmap_operator.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-nxmap_operator.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c atomsf.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-atomsf.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c coords.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-coords.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c cell.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-cell.o
atomsf.cpp: In member function 'bool clipper::AtomShapeFn::rho_grad(const clipper::Coord_orth&, clipper::ftype&, std::vector<double>&) const':
atomsf.cpp:657:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 0; i < params.size(); i++ ) if ( params[i] < 5 )
                                      ^
atomsf.cpp:702:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 0; i < params.size(); i++ )
                                      ^
atomsf.cpp: In member function 'bool clipper::AtomShapeFn::rho_curv(const clipper::Coord_orth&, clipper::ftype&, std::vector<double>&, clipper::Matrix<double>&) const':
atomsf.cpp:770:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 0; i < params.size(); i++ ) if ( params[i] < 5 )
                                      ^
atomsf.cpp:772:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 0; i < params.size(); i++ ) if ( params[i] < 5 )
                                      ^
atomsf.cpp:773:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( int j = 0; j < params.size(); j++ ) if ( params[j] < 5 )
                                        ^
atomsf.cpp: In member function 'bool clipper::AtomShapeFn::rho_grad(const clipper::Coord_orth&, std::vector<double>&) const':
atomsf.cpp:806:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 0; i < params.size(); i++ ) grad[i] = g[params[i]];
                                      ^
atomsf.cpp: In member function 'void clipper::AtomShapeFn::init(const clipper::String&, const ftype&)':
atomsf.cpp:820:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < element.length(); i++ ) {
                                       ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-derivs.lo `test -f 'derivs.cpp' || echo './'`derivs.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c derivs.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-derivs.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-ramachandran.lo `test -f 'ramachandran.cpp' || echo './'`ramachandran.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c ramachandran.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-ramachandran.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-clipper_instance.lo `test -f 'clipper_instance.cpp' || echo './'`clipper_instance.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c clipper_instance.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-clipper_instance.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-fftmap.lo `test -f 'fftmap.cpp' || echo './'`fftmap.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c fftmap.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-fftmap.o
ramachandran.cpp: In member function 'void clipper::Prob_phi_2d::accumulate(const ftype32*)':
ramachandran.cpp:2204:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 { for ( int i = 0; i < data_.size(); i++ ) data_[i] += table[i]; }
                                   ^
ramachandran.cpp: In member function 'void clipper::Prob_phi_2d::normalise()':
ramachandran.cpp:2233:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < data_.size(); i++ ) s += data_[i];
                                   ^
ramachandran.cpp:2235:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < data_.size(); i++ ) data_[i] *= s;
                                   ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-resol_basisfn.lo `test -f 'resol_basisfn.cpp' || echo './'`resol_basisfn.cpp
fftmap.cpp: In member function 'void clipper::FFTmap_p1::debug() const':
fftmap.cpp:253:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < datavec.size(); i++ )
                                     ^
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c resol_basisfn.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-resol_basisfn.o
resol_basisfn.cpp: In member function 'void clipper::Resolution_ordinal::init(const clipper::HKL_info&, const ftype&)':
resol_basisfn.cpp:61:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < hist.size(); i++ )
                                  ^
resol_basisfn.cpp: In member function 'void clipper::Resolution_ordinal::init(const clipper::HKL_data_base&, const ftype&)':
resol_basisfn.cpp:76:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < hist.size(); i++ )
                                  ^
resol_basisfn.cpp: In member function 'void clipper::Resolution_ordinal::init(const clipper::HKL_data_base&, const clipper::Cell&, const ftype&)':
resol_basisfn.cpp:91:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < hist.size(); i++ )
                                  ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-clipper_memory.lo `test -f 'clipper_memory.cpp' || echo './'`clipper_memory.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c clipper_memory.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-clipper_memory.o
clipper_memory.cpp: In destructor 'clipper::PropertyManager::~PropertyManager()':
clipper_memory.cpp:63:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < property_.size(); i++ ) delete property_[i].second;
                                       ^
clipper_memory.cpp: In member function 'clipper::PropertyManager& clipper::PropertyManager::copy(const clipper::PropertyManager&)':
clipper_memory.cpp:73:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < property_.size(); i++ ) delete property_[i].second;
                                       ^
clipper_memory.cpp:75:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < mgr.property_.size(); i++ )
                                           ^
clipper_memory.cpp: In member function 'const clipper::Property_base& clipper::PropertyManager::get_property(const string&) const':
clipper_memory.cpp:99:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < property_.size(); i++ )
                                       ^
clipper_memory.cpp: In member function 'bool clipper::PropertyManager::exists_property(const string&) const':
clipper_memory.cpp:116:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < property_.size(); i++ )
                                       ^
clipper_memory.cpp: In member function 'bool clipper::PropertyManager::delete_property(const string&)':
clipper_memory.cpp:131:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < property_.size(); i++ )
                                       ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-fftmap_sparse.lo `test -f 'fftmap_sparse.cpp' || echo './'`fftmap_sparse.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c fftmap_sparse.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-fftmap_sparse.o
fftmap.cpp: At global scope:
fftmap.cpp:55:15: warning: 'dummy' defined but not used [-Wunused-variable]
 static float* dummy = (fftw_real*) NULL;
               ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-resol_fn.lo `test -f 'resol_fn.cpp' || echo './'`resol_fn.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c resol_fn.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-resol_fn.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-clipper_message.lo `test -f 'clipper_message.cpp' || echo './'`clipper_message.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c clipper_message.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-clipper_message.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-hkl_compute.lo `test -f 'hkl_compute.cpp' || echo './'`hkl_compute.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c hkl_compute.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-hkl_compute.o
fftmap_sparse.cpp:55:15: warning: 'dummy' defined but not used [-Wunused-variable]
 static float* dummy = (fftw_real*) NULL;
               ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-resol_targetfn.lo `test -f 'resol_targetfn.cpp' || echo './'`resol_targetfn.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c resol_targetfn.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-resol_targetfn.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-clipper_stats.lo `test -f 'clipper_stats.cpp' || echo './'`clipper_stats.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c clipper_stats.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-clipper_stats.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-hkl_data.lo `test -f 'hkl_data.cpp' || echo './'`hkl_data.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c hkl_data.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-hkl_data.o
clipper_stats.cpp: In member function 'clipper::ftype clipper::Histogram::sum() const':
clipper_stats.cpp:52:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < data.size(); i++ ) s += data[i];
                                  ^
clipper_stats.cpp: In member function 'const clipper::Histogram& clipper::Histogram::operator+=(const clipper::Histogram&)':
clipper_stats.cpp:70:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < data.size(); i++ ) data[i] += h.data[i];
                                  ^
clipper_stats.cpp: In member function 'void clipper::Generic_ordinal::init(const std::vector<double>&, int)':
clipper_stats.cpp:87:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < values.size(); i++ ) range.include( values[i] );
                                    ^
clipper_stats.cpp:89:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < values.size(); i++ ) accumulate( values[i] );
                                    ^
clipper_stats.cpp: In member function 'void clipper::Generic_ordinal::prep_ordinal()':
clipper_stats.cpp:120:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 1; i < hist.size(); i++ )
                                  ^
clipper_stats.cpp:122:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < hist.size(); i++ )
                                  ^
clipper_stats.cpp: In member function 'void clipper::Generic_ordinal::invert()':
clipper_stats.cpp:131:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 1; i < hist.size()-1; i++ ) {
                                    ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-rotation.lo `test -f 'rotation.cpp' || echo './'`rotation.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c rotation.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-rotation.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-clipper_test.lo `test -f 'clipper_test.cpp' || echo './'`clipper_test.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c clipper_test.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-clipper_test.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-hkl_datatypes.lo `test -f 'hkl_datatypes.cpp' || echo './'`hkl_datatypes.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c hkl_datatypes.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-hkl_datatypes.o
clipper_test.cpp: In member function 'bool clipper::Test_base::test(const clipper::String&, const double&)':
clipper_test.cpp:66:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if ( count < data_val.size() ) {
                              ^
clipper_test.cpp:74:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   } else if ( count == data_val.size() ) {
                                      ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-spacegroup.lo `test -f 'spacegroup.cpp' || echo './'`spacegroup.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c spacegroup.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-spacegroup.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-clipper_types.lo `test -f 'clipper_types.cpp' || echo './'`clipper_types.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c clipper_types.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-clipper_types.o
clipper_types.cpp: In member function 'clipper::String clipper::String::trim() const':
clipper_types.cpp:90:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( i = 0; i < length(); i++ )
                           ^
clipper_types.cpp: In member function 'clipper::ftype clipper::String::rational() const':
clipper_types.cpp:149:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( i = 0; i < s.length(); i++ ) if ( s[i] == '/' ) break;
                             ^
clipper_types.cpp:150:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if ( i == s.length() ) return ( s.f() );
                      ^
spacegroup.cpp: In member function 'void clipper::Spgr_descr::Symop_codes::init_hall(const clipper::String&)':
spacegroup.cpp:115:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( j = 0; j < token.length(); j++ ) {
                                 ^
spacegroup.cpp:128:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( j = 0; j < token.length(); j++ ) {
                                   ^
spacegroup.cpp:214:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( k = 0; k < trans[i].length(); k++ ) {
                                      ^
spacegroup.cpp:256:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( i = 0; i < ops.size(); i++ )
                             ^
spacegroup.cpp: In member function 'void clipper::Spgr_descr::Symop_codes::init_symops(const clipper::String&)':
spacegroup.cpp:264:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < symops.size(); i++ )
                                    ^
spacegroup.cpp: In member function 'clipper::Spgr_descr::Symop_codes clipper::Spgr_descr::Symop_codes::expand() const':
spacegroup.cpp:280:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( i = 0; i < generators.size(); i++ )
                                      ^
spacegroup.cpp:284:30: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( l = 0; l < ops.size(); l++ )
                              ^
spacegroup.cpp:286:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    if ( l == ops.size() ) ops.push_back( k );
                       ^
spacegroup.cpp:289:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   } while ( ops.size() > size );
                          ^
spacegroup.cpp: In member function 'clipper::Spgr_descr::Symop_codes clipper::Spgr_descr::Symop_codes::primitive_noninversion_ops() const':
spacegroup.cpp:298:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 0; i < pops.size(); i++ )
                                    ^
spacegroup.cpp: In member function 'clipper::Spgr_descr::Symop_codes clipper::Spgr_descr::Symop_codes::inversion_ops() const':
spacegroup.cpp:313:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( i = 0; i < ops.size(); i++ )
                             ^
spacegroup.cpp: In member function 'clipper::Spgr_descr::Symop_codes clipper::Spgr_descr::Symop_codes::primitive_ops() const':
spacegroup.cpp:324:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( i = 0; i < ops.size(); i++ ) {
                             ^
spacegroup.cpp:325:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( j = 0; j < pops.size(); j++ )
                                ^
spacegroup.cpp:327:25: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if ( j == pops.size() ) pops.push_back( ops[i] );
                         ^
spacegroup.cpp: In member function 'clipper::Spgr_descr::Symop_codes clipper::Spgr_descr::Symop_codes::centering_ops() const':
spacegroup.cpp:336:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < ops.size(); i++ )
                                 ^
spacegroup.cpp: In member function 'clipper::Spgr_descr::Symop_codes clipper::Spgr_descr::Symop_codes::laue_ops() const':
spacegroup.cpp:347:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < ops.size(); i++ )
                                 ^
spacegroup.cpp: In member function 'clipper::Spgr_descr::Symop_codes clipper::Spgr_descr::Symop_codes::pgrp_ops() const':
spacegroup.cpp:356:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < ops.size(); i++ )
                                 ^
spacegroup.cpp: In member function 'clipper::Spgr_descr::Symop_codes clipper::Spgr_descr::Symop_codes::patterson_ops() const':
spacegroup.cpp:366:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < ops.size(); i++ )
                                 ^
spacegroup.cpp: In member function 'clipper::Spgr_descr::Symop_codes clipper::Spgr_descr::Symop_codes::generator_ops() const':
spacegroup.cpp:384:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 1; i < cens.size(); i++ ) {
                                  ^
spacegroup.cpp:385:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int j = 0; j < gend.size(); j++ )
                                    ^
spacegroup.cpp:395:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 1; i < prms.size(); i++ ) {
                                  ^
spacegroup.cpp:396:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int j = 0; j < gend.size(); j++ )
                                    ^
spacegroup.cpp:405:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = ncen; i < gens.size(); i++ ) {
                                     ^
spacegroup.cpp: In member function 'unsigned int clipper::Spgr_descr::Symop_codes::hash() const':
spacegroup.cpp:437:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int word = 0; word < data.size(); word++ ) {
                                        ^
spacegroup.cpp: In member function 'int clipper::Spgr_descr::spacegroup_number() const':
spacegroup.cpp:594:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if ( data::sgdata[i].sghash == hash_ ) return data::sgdata[i].num;
                                    ^
spacegroup.cpp: In member function 'clipper::String clipper::Spgr_descr::symbol_hall() const':
spacegroup.cpp:604:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if ( data::sgdata[i].sghash == hash_ ) return String(data::sgdata[i].hall);
                                    ^
spacegroup.cpp: In member function 'clipper::String clipper::Spgr_descr::symbol_hm() const':
spacegroup.cpp:614:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if ( data::sgdata[i].sghash == hash_ ) return String(data::sgdata[i].hm);
                                    ^
spacegroup.cpp: In member function 'clipper::String clipper::Spgr_descr::symbol_xhm() const':
spacegroup.cpp:624:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if ( data::sgdata[i].sghash == hash_ ) {
                                    ^
spacegroup.cpp: In member function 'clipper::String clipper::Spgr_descr::symbol_hm_ext() const':
spacegroup.cpp:640:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if ( data::sgdata[i].sghash == hash_ )
                                    ^
spacegroup.cpp: In function 'bool clipper::reci_asu(const clipper::Spgr_descr::Symop_codes&, clipper::data::ASUfn)':
spacegroup.cpp:680:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( i = 0; i < ops.size(); i++ ) symops[i] = ops[i].isymop();
                             ^
spacegroup.cpp:687:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
           for ( i = 0; i < symops.size(); i++ ) {
                                        ^
spacegroup.cpp:693:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
           if ( i != symops.size() ) return false;
                                 ^
spacegroup.cpp:695:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
           for ( i = 0; i < symops.size(); i++ ) {
                                        ^
spacegroup.cpp:701:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
           if ( i == symops.size() ) return false;
                                 ^
spacegroup.cpp: In function 'clipper::Vec3<double> clipper::real_asu(const clipper::Spgr_descr::Symop_codes&)':
spacegroup.cpp:713:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( i = 0; i < ops.size(); i++ ) symops[i] = ops[i].isymop();
                             ^
spacegroup.cpp:724:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( sym = 0; sym < symops.size(); sym++ )
                                        ^
spacegroup.cpp:732:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( sym = 0; sym < symops.size(); sym++ )
                                    ^
spacegroup.cpp:756:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int gui = 0; gui < gridlim.size(); gui++ )
                                         ^
spacegroup.cpp:757:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int gvi = 0; gvi < gridlim.size(); gvi++ )
                                           ^
spacegroup.cpp:758:45: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( int gwi = 0; gwi < gridlim.size(); gwi++ )
                                             ^
spacegroup.cpp:763:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( j = 0; j < grids.size(); j++ ) {
                               ^
spacegroup.cpp: In constructor 'clipper::Spgr_cacheobj::Spgr_cacheobj(const Key&)':
spacegroup.cpp:808:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if ( data::lgdata[lgrp].lghash == lghash ) break;
                                       ^
spacegroup.cpp:827:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < ops.size(); i++ ) {
                                 ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-hkl_info.lo `test -f 'hkl_info.cpp' || echo './'`hkl_info.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c hkl_info.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-hkl_info.o
hkl_info.cpp: In member function 'void clipper::HKL_info::add_hkl_list(const std::vector<clipper::HKL>&)':
hkl_info.cpp:224:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < add.size(); i++ ) {
                                 ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-spacegroup_data.lo `test -f 'spacegroup_data.cpp' || echo './'`spacegroup_data.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c spacegroup_data.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-spacegroup_data.o
spacegroup_data.cpp:198:1: warning: narrowing conversion of '2610067359u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
 };
 ^
spacegroup_data.cpp:198:1: warning: narrowing conversion of '2962048719u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3813317101u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3877911484u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '2287542463u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3917543540u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '4258748853u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '4067859496u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3444278312u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '2614353140u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3651312556u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3484884337u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '2324054638u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '4148985731u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3933373658u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '2979257203u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '4231977723u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3591180704u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '4157935919u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '4223201675u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '2748618130u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3102871870u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3117302633u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3281487799u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3885529868u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3048642136u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '4059855186u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:198:1: warning: narrowing conversion of '3444775782u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3338984827u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
 };
 ^
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2418865768u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2426619715u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2600648639u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3658907988u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2920162523u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3736409915u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3304036909u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3577291489u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2467438157u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2476584806u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2787018025u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2794533890u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3970646846u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3651655770u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2233849817u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3075091836u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3376757356u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2203202954u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3968571990u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4250739354u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3720501179u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3423924087u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2639537549u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3814404765u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3611503211u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2840345979u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2610067359u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2962048719u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3464647135u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2383513604u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2548583260u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2281965707u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2886127454u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4162310335u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3481495678u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2650018709u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3387231348u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4099545763u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3851199087u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2287579854u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3695750447u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2320829875u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2609100159u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3086500330u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2358795883u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2428675635u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2985148773u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2940137298u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2966596741u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2530682556u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3828356358u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2932721431u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4225521361u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2841246731u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3612797723u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4001572539u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2186743739u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2407165676u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3554470624u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2748863932u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3171837179u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4149262006u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2317733224u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3904697697u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3687955413u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2396020597u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3977578948u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3210900015u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2340055769u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2664252618u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4041164901u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3290948754u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3033746491u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2816651811u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2467962580u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3403438891u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3245172031u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2411766836u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3054495452u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4118117833u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3123245954u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3656230195u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3359317503u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2480337311u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4004083182u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3056847700u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4244930436u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2233262645u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2619612381u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2433297549u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3956173870u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3649577938u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4235008281u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4122697013u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3366780887u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2196909466u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2583737779u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2365636824u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2222294184u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3803916382u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2704522815u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4019591182u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3961561985u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2904168411u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2827994089u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2451072421u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3328466949u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2849998979u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3202350568u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3611343872u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4034550745u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3512997230u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3877911484u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3910432237u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2472171252u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3734125456u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3464349548u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2954092755u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2329734579u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3306479842u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4272062715u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2836088108u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2309349631u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2230100962u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3226306877u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3010129311u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2296155526u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3544540725u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2743406947u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2335940210u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3200102458u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3723179740u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3831314160u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3304297251u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2914344754u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3669114678u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3922832906u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3282737865u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2834052845u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3520796856u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3844365193u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3156463287u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3871557757u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2924629190u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3075139897u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3235735351u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2766637057u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3741674372u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3646855672u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3805952218u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3800996749u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3330708811u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3425056532u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3335665180u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2820462626u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3746678995u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2608206099u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3584412123u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2191608971u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2801656090u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3509235971u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3509235971u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2979997421u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2602742340u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3059749275u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2197155804u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3059749275u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3448854542u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3541845266u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3288189263u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3000293099u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3408682101u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2405377762u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4012135091u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4138183804u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2531055661u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3784582270u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3943298768u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2368582245u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2375498155u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3661664722u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3485610683u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3827726622u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3708157542u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4120944547u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2971291316u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3305622868u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3423497645u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2890254593u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2469869911u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3616936840u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2177769105u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3531304831u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4033975554u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2922806388u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3296398150u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2227085359u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3574404053u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4155514607u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3328906332u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2481568666u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4087488310u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3102871870u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3086641310u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3584573776u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4055167073u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2178348554u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2599328103u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2372539671u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3481411672u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4192172379u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2866230925u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2861034217u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2781013030u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3817986002u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4171872447u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3839598502u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3621875458u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3777132522u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3110341088u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2346550105u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2262638891u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3607781190u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2387486200u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3584076333u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4258748853u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3196915071u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3651312556u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3246656122u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2548228053u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3818862260u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2718664081u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2672623530u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3763332488u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3960320221u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3109139703u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4157712432u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4148985731u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4231977723u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3923258009u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2591885779u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3144227985u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2732437319u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2174916234u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2226666379u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2989485991u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3722360165u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2418216543u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4007019170u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2300242721u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2755161968u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3075421779u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4107856205u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4004296502u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4215949140u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3408260776u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4059855186u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2281302218u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2481163377u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3695182785u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '4192642629u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3558463651u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3795358687u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2477190635u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3311068970u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3720437491u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3146954322u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3807221806u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3320044959u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3353778870u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3132977604u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '3688590332u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
spacegroup_data.cpp:733:1: warning: narrowing conversion of '2193024274u' from 'unsigned int' to 'int' inside { } is ill-formed in C++11 [-Wnarrowing]
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-clipper_util.lo `test -f 'clipper_util.cpp' || echo './'`clipper_util.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c clipper_util.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-clipper_util.o
clipper_util.cpp: In constructor 'clipper::Util::Util()':
clipper_util.cpp:75:18: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
     ((U32*)&nan_)->i = CLIPPER_NULL_MASK_32;
                  ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-hkl_lookup.lo `test -f 'hkl_lookup.cpp' || echo './'`hkl_lookup.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c hkl_lookup.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-hkl_lookup.o
hkl_lookup.cpp: In member function 'void clipper::HKL_lookup::init(const std::vector<clipper::HKL>&)':
hkl_lookup.cpp:59:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for (i=0; i<hkl.size(); i++) {
                        ^
hkl_lookup.cpp:68:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for (i=0; i<hkl.size(); i++) {
                        ^
hkl_lookup.cpp:81:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for (i=0; i<hkl.size(); i++) {
                        ^
hkl_lookup.cpp:98:24: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for (i=0; i<hkl.size(); i++) {
                        ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-symop.lo `test -f 'symop.cpp' || echo './'`symop.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c symop.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-symop.o
symop.cpp: In constructor 'clipper::RTop_frac::RTop_frac(const clipper::String&)':
symop.cpp:70:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( nchr = 0; nchr < row.length(); nchr++ ) {
                                       ^
symop.cpp:75:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( npart = 0; npart < cols.size(); npart++ ) {
                                        ^
symop.cpp:79:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( nchr = 0; nchr < col.length(); nchr++ ) {
                                         ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-container.lo `test -f 'container.cpp' || echo './'`container.cpp
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-hkl_operators.lo `test -f 'hkl_operators.cpp' || echo './'`hkl_operators.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c container.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-container.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c hkl_operators.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-hkl_operators.o
container.cpp: In member function 'void clipper::Container::del_child(clipper::Container&)':
container.cpp:61:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < children.size(); i++ )
                                      ^
container.cpp: In member function 'virtual void clipper::Container::update()':
container.cpp:68:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < children.size(); i++ ) child(i).update();
                                      ^
container.cpp: In destructor 'virtual clipper::Container::~Container()':
container.cpp:109:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < children.size(); i++ ) {
                                      ^
container.cpp: In member function 'const clipper::Container& clipper::Container::child(const int&) const':
container.cpp:159:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if ( i < 0 || i >= children.size() )
                                    ^
container.cpp: In member function 'clipper::Container& clipper::Container::child(const int&)':
container.cpp:166:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if ( i < 0 || i >= children.size() )
                                    ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-container_hkl.lo `test -f 'container_hkl.cpp' || echo './'`container_hkl.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c container_hkl.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-container_hkl.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-map_interp.lo `test -f 'map_interp.cpp' || echo './'`map_interp.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c map_interp.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-map_interp.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-container_map.lo `test -f 'container_map.cpp' || echo './'`container_map.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c container_map.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-container_map.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-map_utils.lo `test -f 'map_utils.cpp' || echo './'`map_utils.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c map_utils.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-map_utils.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-xmap.lo `test -f 'xmap.cpp' || echo './'`xmap.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c xmap.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-xmap.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-container_types.lo `test -f 'container_types.cpp' || echo './'`container_types.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c container_types.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-container_types.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-nxmap.lo `test -f 'nxmap.cpp' || echo './'`nxmap.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c nxmap.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-nxmap.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-clipper_thread.lo `test -f 'clipper_thread.cpp' || echo './'`clipper_thread.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c clipper_thread.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-clipper_thread.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-test_core.lo `test -f 'test_core.cpp' || echo './'`test_core.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c test_core.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-test_core.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o libclipper_core_la-test_data.lo `test -f 'test_data.cpp' || echo './'`test_data.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c test_data.cpp  -fPIC -DPIC -o .libs/libclipper_core_la-test_data.o
test_core.cpp: In member function 'bool clipper::Test_core::operator()()':
test_core.cpp:153:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 0; i < resols.size(); i++ )
                                      ^
test_core.cpp:282:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 0; i < sizeof(pgs)/sizeof(pgs[0]); i++ )
                                                   ^
test_core.cpp:294:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int s = 0; s < hallsymbols.size(); s++ ) {
                                           ^
/bin/sh ../../libtool  --tag=CXX   --mode=link g++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro  -o libclipper-core.la -rpath /usr/lib libclipper_core_la-atomsf.lo libclipper_core_la-coords.lo libclipper_core_la-nxmap_operator.lo libclipper_core_la-cell.lo libclipper_core_la-derivs.lo libclipper_core_la-ramachandran.lo libclipper_core_la-clipper_instance.lo libclipper_core_la-fftmap.lo libclipper_core_la-resol_basisfn.lo libclipper_core_la-clipper_memory.lo libclipper_core_la-fftmap_sparse.lo libclipper_core_la-resol_fn.lo libclipper_core_la-clipper_message.lo libclipper_core_la-hkl_compute.lo libclipper_core_la-resol_targetfn.lo libclipper_core_la-clipper_stats.lo libclipper_core_la-hkl_data.lo libclipper_core_la-rotation.lo libclipper_core_la-clipper_test.lo libclipper_core_la-hkl_datatypes.lo libclipper_core_la-spacegroup.lo libclipper_core_la-clipper_types.lo libclipper_core_la-hkl_info.lo libclipper_core_la-spacegroup_data.lo libclipper_core_la-clipper_util.lo libclipper_core_la-hkl_lookup.lo libclipper_core_la-symop.lo libclipper_core_la-container.lo libclipper_core_la-hkl_operators.lo libclipper_core_la-container_hkl.lo libclipper_core_la-map_interp.lo libclipper_core_la-container_map.lo libclipper_core_la-map_utils.lo libclipper_core_la-xmap.lo libclipper_core_la-container_types.lo libclipper_core_la-nxmap.lo libclipper_core_la-clipper_thread.lo libclipper_core_la-test_core.lo libclipper_core_la-test_data.lo -lsrfftw -lsfftw -lpthread -lm 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  .libs/libclipper_core_la-atomsf.o .libs/libclipper_core_la-coords.o .libs/libclipper_core_la-nxmap_operator.o .libs/libclipper_core_la-cell.o .libs/libclipper_core_la-derivs.o .libs/libclipper_core_la-ramachandran.o .libs/libclipper_core_la-clipper_instance.o .libs/libclipper_core_la-fftmap.o .libs/libclipper_core_la-resol_basisfn.o .libs/libclipper_core_la-clipper_memory.o .libs/libclipper_core_la-fftmap_sparse.o .libs/libclipper_core_la-resol_fn.o .libs/libclipper_core_la-clipper_message.o .libs/libclipper_core_la-hkl_compute.o .libs/libclipper_core_la-resol_targetfn.o .libs/libclipper_core_la-clipper_stats.o .libs/libclipper_core_la-hkl_data.o .libs/libclipper_core_la-rotation.o .libs/libclipper_core_la-clipper_test.o .libs/libclipper_core_la-hkl_datatypes.o .libs/libclipper_core_la-spacegroup.o .libs/libclipper_core_la-clipper_types.o .libs/libclipper_core_la-hkl_info.o .libs/libclipper_core_la-spacegroup_data.o .libs/libclipper_core_la-clipper_util.o .libs/libclipper_core_la-hkl_lookup.o .libs/libclipper_core_la-symop.o .libs/libclipper_core_la-container.o .libs/libclipper_core_la-hkl_operators.o .libs/libclipper_core_la-container_hkl.o .libs/libclipper_core_la-map_interp.o .libs/libclipper_core_la-container_map.o .libs/libclipper_core_la-map_utils.o .libs/libclipper_core_la-xmap.o .libs/libclipper_core_la-container_types.o .libs/libclipper_core_la-nxmap.o .libs/libclipper_core_la-clipper_thread.o .libs/libclipper_core_la-test_core.o .libs/libclipper_core_la-test_data.o   -lsrfftw -lsfftw -lpthread -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-core.so.2 -o .libs/libclipper-core.so.2.0.1
libtool: link: (cd ".libs" && rm -f "libclipper-core.so.2" && ln -s "libclipper-core.so.2.0.1" "libclipper-core.so.2")
libtool: link: (cd ".libs" && rm -f "libclipper-core.so" && ln -s "libclipper-core.so.2.0.1" "libclipper-core.so")
libtool: link: ( cd ".libs" && rm -f "libclipper-core.la" && ln -s "../libclipper-core.la" "libclipper-core.la" )
make[3]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper/core'
Making all in contrib
make[3]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper/contrib'
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o convolution_search.lo convolution_search.cpp
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o sfcalc.lo sfcalc.cpp
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o edcalc.lo edcalc.cpp
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o sfcalc_obs.lo sfcalc_obs.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c convolution_search.cpp  -fPIC -DPIC -o .libs/convolution_search.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c edcalc.cpp  -fPIC -DPIC -o .libs/edcalc.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c sfcalc.cpp  -fPIC -DPIC -o .libs/sfcalc.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c sfcalc_obs.cpp  -fPIC -DPIC -o .libs/sfcalc_obs.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o fffear.lo fffear.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c fffear.cpp  -fPIC -DPIC -o .libs/fffear.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o sfscale.lo sfscale.cpp
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o function_object_bases.lo function_object_bases.cpp
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o sfweight.lo sfweight.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c sfscale.cpp  -fPIC -DPIC -o .libs/sfscale.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c function_object_bases.cpp  -fPIC -DPIC -o .libs/function_object_bases.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c sfweight.cpp  -fPIC -DPIC -o .libs/sfweight.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o mapfilter.lo mapfilter.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c mapfilter.cpp  -fPIC -DPIC -o .libs/mapfilter.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o skeleton.lo skeleton.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c skeleton.cpp  -fPIC -DPIC -o .libs/skeleton.o
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o originmatch.lo originmatch.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c originmatch.cpp  -fPIC -DPIC -o .libs/originmatch.o
skeleton.cpp: In member function 'virtual bool clipper::Skeleton_basic::operator()(clipper::Xmap<int>&, const clipper::Xmap<float>&) const':
skeleton.cpp:126:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < index.size(); i++ )
                                   ^
/bin/sh ../../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I../..     -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o test_contrib.lo test_contrib.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I../.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c test_contrib.cpp  -fPIC -DPIC -o .libs/test_contrib.o
test_contrib.cpp: In member function 'bool clipper::Test_contrib::operator()()':
test_contrib.cpp:113:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int s = 0; s < hallsymbols.size(); s++ ) {
                                           ^
test_contrib.cpp:220:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 0; i < params_e1.size(); i++ ) {
                                         ^
/bin/sh ../../libtool  --tag=CXX   --mode=link g++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro  -o libclipper-contrib.la -rpath /usr/lib convolution_search.lo sfcalc.lo edcalc.lo sfcalc_obs.lo fffear.lo sfscale.lo function_object_bases.lo sfweight.lo mapfilter.lo skeleton.lo originmatch.lo test_contrib.lo ../core/libclipper-core.la -lm 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  .libs/convolution_search.o .libs/sfcalc.o .libs/edcalc.o .libs/sfcalc_obs.o .libs/fffear.o .libs/sfscale.o .libs/function_object_bases.o .libs/sfweight.o .libs/mapfilter.o .libs/skeleton.o .libs/originmatch.o .libs/test_contrib.o   -Wl,-rpath -Wl,/builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs ../core/.libs/libclipper-core.so -lsrfftw -lsfftw -lpthread -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-contrib.so.2 -o .libs/libclipper-contrib.so.2.0.1
libtool: link: (cd ".libs" && rm -f "libclipper-contrib.so.2" && ln -s "libclipper-contrib.so.2.0.1" "libclipper-contrib.so.2")
libtool: link: (cd ".libs" && rm -f "libclipper-contrib.so" && ln -s "libclipper-contrib.so.2.0.1" "libclipper-contrib.so")
libtool: link: ( cd ".libs" && rm -f "libclipper-contrib.la" && ln -s "../libclipper-contrib.la" "libclipper-contrib.la" )
make[3]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper/contrib'
make[3]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper'
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o mmdb/clipper_mmdb.lo mmdb/clipper_mmdb.cpp
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o minimol/minimol.lo minimol/minimol.cpp
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o minimol/container_minimol.lo minimol/container_minimol.cpp
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o minimol/minimol_data.lo minimol/minimol_data.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c mmdb/clipper_mmdb.cpp  -fPIC -DPIC -o mmdb/.libs/clipper_mmdb.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c minimol/container_minimol.cpp  -fPIC -DPIC -o minimol/.libs/container_minimol.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c minimol/minimol.cpp  -fPIC -DPIC -o minimol/.libs/minimol.o
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c minimol/minimol_data.cpp  -fPIC -DPIC -o minimol/.libs/minimol_data.o
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o minimol/minimol_io.lo minimol/minimol_io.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c minimol/minimol_io.cpp  -fPIC -DPIC -o minimol/.libs/minimol_io.o
minimol/minimol.cpp: In static member function 'static clipper::String clipper::MAtom::id_tidy(const clipper::String&)':
minimol/minimol.cpp:99:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  if ( pos == String::npos ) pos = id.length();
                      ^
minimol/minimol.cpp: In member function 'clipper::Atom_list clipper::MMonomer::atom_list() const':
minimol/minimol.cpp:149:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for ( int a = 0; a < children.size(); a++ )
                                     ^
minimol/minimol.cpp: In member function 'void clipper::MMonomer::transform(clipper::RTop_orth)':
minimol/minimol.cpp:155:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 { for ( int i = 0; i < children.size(); i++ ) children[i].transform( rt ); }
                                      ^
minimol/minimol.cpp: In member function 'clipper::MMonomer clipper::MMonomer::select(const clipper::String&, clipper::MM::MODE) const':
minimol/minimol.cpp:177:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int i = 0; i < children.size(); i++ ) result.insert( children[i] );
                                       ^
minimol/minimol.cpp:180:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int j = 0; j < list.size(); j++ ) {
                                   ^
minimol/minimol.cpp:182:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
      for ( int i = 0; i < children.size(); i++ )
                                         ^
minimol/minimol.cpp: In member function 'std::vector<int> clipper::MMonomer::select_index(const clipper::String&, clipper::MM::MODE) const':
minimol/minimol.cpp:199:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int i = 0; i < children.size(); i++ ) result.push_back( i );
                                       ^
minimol/minimol.cpp:202:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int j = 0; j < list.size(); j++ ) {
                                   ^
minimol/minimol.cpp:204:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
      for ( int i = 0; i < children.size(); i++ )
                                         ^
minimol/minimol.cpp: In member function 'int clipper::MMonomer::lookup(const clipper::String&, const clipper::MM::MODE&) const':
minimol/minimol.cpp:234:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for ( int i = 0; i < children.size(); i++ )
                                     ^
minimol/minimol.cpp: In static member function 'static clipper::String clipper::MMonomer::id_tidy(const clipper::String&)':
minimol/minimol.cpp:300:22: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  if ( pos == String::npos )
                      ^
minimol/minimol.cpp: In member function 'clipper::Atom_list clipper::MPolymer::atom_list() const':
minimol/minimol.cpp:318:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for ( int m = 0; m < children.size(); m++ )
                                     ^
minimol/minimol.cpp: In member function 'void clipper::MPolymer::transform(clipper::RTop_orth)':
minimol/minimol.cpp:325:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 { for ( int i = 0; i < children.size(); i++ ) children[i].transform( rt ); }
                                      ^
minimol/minimol.cpp: In member function 'clipper::MPolymer clipper::MPolymer::select(const clipper::String&, clipper::MM::MODE) const':
minimol/minimol.cpp:348:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int i = 0; i < children.size(); i++ )
                                       ^
minimol/minimol.cpp:352:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int j = 0; j < list.size(); j++ ) {
                                   ^
minimol/minimol.cpp:354:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
      for ( int i = 0; i < children.size(); i++ )
                                         ^
minimol/minimol.cpp: In member function 'std::vector<int> clipper::MPolymer::select_index(const clipper::String&, clipper::MM::MODE) const':
minimol/minimol.cpp:371:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int i = 0; i < children.size(); i++ )
                                       ^
minimol/minimol.cpp:375:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int j = 0; j < list.size(); j++ ) {
                                   ^
minimol/minimol.cpp:377:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
      for ( int i = 0; i < children.size(); i++ )
                                         ^
minimol/minimol.cpp: In member function 'int clipper::MPolymer::lookup(const clipper::String&, const clipper::MM::MODE&) const':
minimol/minimol.cpp:407:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for ( int i = 0; i < children.size(); i++ )
                                     ^
minimol/minimol.cpp: In member function 'clipper::Atom_list clipper::MModel::atom_list() const':
minimol/minimol.cpp:482:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for ( int p = 0; p < children.size(); p++ )
                                     ^
minimol/minimol.cpp: In member function 'void clipper::MModel::transform(clipper::RTop_orth)':
minimol/minimol.cpp:490:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
 { for ( int i = 0; i < children.size(); i++ ) children[i].transform( rt ); }
                                      ^
minimol/minimol.cpp: In member function 'clipper::MModel clipper::MModel::select(const clipper::String&, clipper::MM::MODE) const':
minimol/minimol.cpp:514:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int i = 0; i < children.size(); i++ )
                                       ^
minimol/minimol.cpp:518:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int j = 0; j < list.size(); j++ ) {
                                   ^
minimol/minimol.cpp:520:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
      for ( int i = 0; i < children.size(); i++ )
                                         ^
minimol/minimol.cpp: In member function 'std::vector<int> clipper::MModel::select_index(const clipper::String&, clipper::MM::MODE) const':
minimol/minimol.cpp:537:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int i = 0; i < children.size(); i++ )
                                       ^
minimol/minimol.cpp:541:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int j = 0; j < list.size(); j++ ) {
                                   ^
minimol/minimol.cpp:543:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
      for ( int i = 0; i < children.size(); i++ )
                                         ^
minimol/minimol.cpp: In member function 'int clipper::MModel::lookup(const clipper::String&, const clipper::MM::MODE&) const':
minimol/minimol.cpp:572:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for ( int i = 0; i < children.size(); i++ )
                                     ^
minimol/minimol.cpp: In member function 'std::vector<clipper::MAtomIndex> clipper::MModel::select_atom_index(const clipper::String&, clipper::MM::MODE) const':
minimol/minimol.cpp:658:32: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for ( int p = 0; p < mps.size(); p++ ) {
                                ^
minimol/minimol.cpp:661:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int m = 0; m < mms.size(); m++ ) {
                                  ^
minimol/minimol.cpp:664:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
      for ( int a = 0; a < mas.size(); a++ ) {
                                    ^
minimol/minimol_io.cpp: In member function 'void clipper::MMDBfile::export_minimol(const clipper::MiniMol&)':
minimol/minimol_io.cpp:224:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int p = 0; p < smod.data.size(); p++ ) {  // loop over chains
                                       ^
minimol/minimol_io.cpp:229:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int r = 0; r < spol.data.size(); r++ ) {  // loop over residues
                                         ^
minimol/minimol_io.cpp:234:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( int a = 0; a < smon.data.size(); a++ ) {  // loop over atoms
                                           ^
minimol/minimol_io.cpp:248:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    for ( int p = 0; p < smod.data.size(); p++ ) {  // loop over chains
                                        ^
minimol/minimol_io.cpp:255:42: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
      for ( int r = 0; r < spol.data.size(); r++ ) {  // loop over residues
                                          ^
minimol/minimol_io.cpp:262:44: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
        for ( int a = 0; a < smon.data.size(); a++ ) {  // loop over atoms
                                            ^
minimol/minimol_io.cpp:277:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int p = 0; p < smod.data.size(); p++ ) {  // loop over chains
                                       ^
minimol/minimol_io.cpp:283:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int r = 0; r < spol.data.size(); r++ ) {  // loop over residues
                                         ^
minimol/minimol_io.cpp:289:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( int a = 0; a < smon.data.size(); a++ ) {  // loop over atoms
                                           ^
minimol/minimol_io.cpp:300:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int p = 0; p < smod.data.size(); p++ ) {  // loop over chains
                                       ^
minimol/minimol_io.cpp:303:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int r = 0; r < spol.data.size(); r++ ) {  // loop over residues
                                         ^
minimol/minimol_io.cpp:308:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       if ( pos != String::npos )
                           ^
minimol/minimol_io.cpp:310:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( int a = 0; a < smon.data.size(); a++ ) {  // loop over atoms
                                           ^
minimol/minimol_io.cpp: In member function 'void clipper::SEQfile::import_molecule_sequence(clipper::MMoleculeSequence&)':
minimol/minimol_io.cpp:373:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int l = 0; l < lines.size(); l++ ) {
                                   ^
minimol/minimol_io.cpp:386:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( int i = 0; i < line.length(); i++ )
                                        ^
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o minimol/minimol_seq.lo minimol/minimol_seq.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c minimol/minimol_seq.cpp  -fPIC -DPIC -o minimol/.libs/minimol_seq.o
minimol/minimol_seq.cpp: In member function 'int clipper::MMoleculeSequence::lookup(const clipper::String&, const clipper::MM::MODE&) const':
minimol/minimol_seq.cpp:78:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < children.size(); i++ )
                                      ^
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o minimol/minimol_utils.lo minimol/minimol_utils.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c minimol/minimol_utils.cpp  -fPIC -DPIC -o minimol/.libs/minimol_utils.o
minimol/minimol_utils.cpp: In constructor 'clipper::MAtomNonBond::MAtomNonBond(const clipper::MiniMol&, double)':
minimol/minimol_utils.cpp:91:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < iatoms.size(); i++ ) {
                                    ^
minimol/minimol_utils.cpp:93:49: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if ( lookup[iatoms[i].first] == iatoms.size() )
                                                 ^
minimol/minimol_utils.cpp: In member function 'std::vector<clipper::MAtomIndexSymmetry> clipper::MAtomNonBond::operator()(const clipper::Coord_orth&, double) const':
minimol/minimol_utils.cpp:145:35: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < atoms.size(); i++ ) {
                                   ^
minimol/minimol_utils.cpp: In member function 'void clipper::MAtomNonBond::debug() const':
minimol/minimol_utils.cpp:157:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < lookup.size(); i++ )
                                    ^
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o phs/phs_io.lo phs/phs_io.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c phs/phs_io.cpp  -fPIC -DPIC -o phs/.libs/phs_io.o
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o cif/cif_data_io.lo cif/cif_data_io.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c cif/cif_data_io.cpp  -fPIC -DPIC -o cif/.libs/cif_data_io.o
cif/cif_data_io.cpp: In member function 'void clipper::CIFfile::close_read()':
cif/cif_data_io.cpp:199:7: warning: variable 'ret_val' set but not used [-Wunused-but-set-variable]
   int ret_val = 0;
       ^
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o ccp4/ccp4_mtz_types.lo ccp4/ccp4_mtz_types.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c ccp4/ccp4_mtz_types.cpp  -fPIC -DPIC -o ccp4/.libs/ccp4_mtz_types.o
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o ccp4/ccp4_mtz_io.lo ccp4/ccp4_mtz_io.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c ccp4/ccp4_mtz_io.cpp  -fPIC -DPIC -o ccp4/.libs/ccp4_mtz_io.o
cif/cif_data_io.cpp:360:24: warning: 'D_sigma' may be used uninitialized in this function [-Wmaybe-uninitialized]
         x1[1] = D_sigma;
                        ^
cif/cif_data_io.cpp:389:29: warning: 'sigI_plus' may be used uninitialized in this function [-Wmaybe-uninitialized]
        x_anom[1] = sigI_plus;
                             ^
cif/cif_data_io.cpp:391:30: warning: 'sigI_minus' may be used uninitialized in this function [-Wmaybe-uninitialized]
        x_anom[3] = sigI_minus;
                              ^
ccp4/ccp4_mtz_io.cpp: In function 'const std::vector<clipper::String> clipper::mtz_assign(const clipper::String&, const clipper::String&, const clipper::String&, const int&)':
ccp4/ccp4_mtz_io.cpp:206:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i=0; i < list.size(); i++) mtz_names[i] = assign + "." + type + "." + list[i];
                                 ^
ccp4/ccp4_mtz_io.cpp:213:33: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i=0; i < list.size(); i++) mtz_names[i] = pref + list[i];
                                 ^
ccp4/ccp4_mtz_io.cpp: In function 'void clipper::write_spacegroup(CMtz::MTZ*, const clipper::Spacegroup&, const char&)':
ccp4/ccp4_mtz_io.cpp:263:61: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int s = 0; s < sizeof(ccp4_code)/sizeof(ccp4_code[0]); s++ )
                                                             ^
ccp4/ccp4_mtz_io.cpp: In function 'void clipper::write_hierarchy(CMtz::MTZ*, std::vector<clipper::CCP4MTZfile::crystalinf>&)':
ccp4/ccp4_mtz_io.cpp:345:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for (int x = 0; x < crystals.size(); x ++ ) {
                                     ^
ccp4/ccp4_mtz_io.cpp:353:51: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int s = 0; s < crystals[x].datasets.size(); s ++ ) {
                                                   ^
ccp4/ccp4_mtz_io.cpp:358:64: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for (int c = 0; c < crystals[x].datasets[s].columns.size(); c ++ ) {
                                                                ^
ccp4/ccp4_mtz_io.cpp: In function 'void clipper::reference_cols(CMtz::MTZ*, std::vector<CMtz::MTZCOL*>, std::vector<std::vector<clipper::CCP4MTZfile::hkldatacol> >, std::vector<std::vector<int> >&, std::vector<std::vector<double> >&)':
ccp4/ccp4_mtz_io.cpp:389:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for ( mcol = 0; mcol < lookup.size(); mcol++ )
                                     ^
ccp4/ccp4_mtz_io.cpp:392:27: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  if ( mcol == lookup.size() )
                           ^
ccp4/ccp4_mtz_io.cpp: In member function 'bool clipper::CCP4MTZfile::match_path(const clipper::String&, int&, int&, int&)':
ccp4/ccp4_mtz_io.cpp:405:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( x = 0; x < crystals.size(); x ++ )
                                  ^
ccp4/ccp4_mtz_io.cpp:407:48: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( s = 0; s < crystals[x].datasets.size(); s ++ )
                                                ^
ccp4/ccp4_mtz_io.cpp:409:61: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( c = 0; c < crystals[x].datasets[s].columns.size(); c ++ )
                                                             ^
ccp4/ccp4_mtz_io.cpp:413:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( x = 0; x < crystals.size(); x ++ )
                                  ^
ccp4/ccp4_mtz_io.cpp:415:48: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( s = 0; s < crystals[x].datasets.size(); s ++ )
                                                ^
ccp4/ccp4_mtz_io.cpp:419:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( x = 0; x < crystals.size(); x ++ )
                                  ^
ccp4/ccp4_mtz_io.cpp: In member function 'void clipper::CCP4MTZfile::open_read(clipper::String)':
ccp4/ccp4_mtz_io.cpp:490:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int h = 0; h < history_.size(); h++ )
                                      ^
ccp4/ccp4_mtz_io.cpp: In member function 'void clipper::CCP4MTZfile::close_read()':
ccp4/ccp4_mtz_io.cpp:548:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < lookup_i.size(); i++ ) {
                                      ^
ccp4/ccp4_mtz_io.cpp:560:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( lst = 0; lst < hkl_data_i.size(); lst++ ) hkl_data_i[lst]->update();
                                        ^
ccp4/ccp4_mtz_io.cpp:571:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( lst = 0; lst < cols.size(); lst++ ) {
                                    ^
ccp4/ccp4_mtz_io.cpp:573:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( col = 0; col < cols[lst].size(); col++ ) {
                                           ^
ccp4/ccp4_mtz_io.cpp: In member function 'void clipper::CCP4MTZfile::close_write()':
ccp4/ccp4_mtz_io.cpp:664:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int h = 0; h < history_.size(); h++ )
                                        ^
ccp4/ccp4_mtz_io.cpp:665:45: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( int c = 0; c < history_[h].size(); c++ )
                                             ^
ccp4/ccp4_mtz_io.cpp:691:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( lst = 0; lst < cols.size(); lst++ ) {
                                    ^
ccp4/ccp4_mtz_io.cpp:695:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( col = 0; col < cols[lst].size(); col++ ) {
                                           ^
ccp4/ccp4_mtz_io.cpp:708:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( c = 0; c < lookup_o.size(); c++ )
                                    ^
ccp4/ccp4_mtz_io.cpp: In member function 'void clipper::CCP4MTZfile::open_append(clipper::String, clipper::String)':
ccp4/ccp4_mtz_io.cpp:766:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int h = 0; h < history_.size(); h++ )
                                      ^
ccp4/ccp4_mtz_io.cpp: In member function 'void clipper::CCP4MTZfile::close_append()':
ccp4/ccp4_mtz_io.cpp:812:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < lookup_i.size(); i++ ) {
                                      ^
ccp4/ccp4_mtz_io.cpp:837:40: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int h = 0; h < history_.size(); h++ )
                                        ^
ccp4/ccp4_mtz_io.cpp:838:45: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( int c = 0; c < history_[h].size(); c++ )
                                             ^
ccp4/ccp4_mtz_io.cpp:855:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < lookup_i.size(); i++ ) {
                                      ^
ccp4/ccp4_mtz_io.cpp:857:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( c = 0; c < lookup_o.size(); c++ )
                                    ^
ccp4/ccp4_mtz_io.cpp:859:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     if ( c == lookup_o.size() )
                             ^
ccp4/ccp4_mtz_io.cpp:875:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 0; i < cpcols.size(); i++ ) {
                                      ^
ccp4/ccp4_mtz_io.cpp:880:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( lst = 0; lst < cols.size(); lst++ ) {
                                    ^
ccp4/ccp4_mtz_io.cpp:884:43: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( col = 0; col < cols[lst].size(); col++ ) {
                                           ^
ccp4/ccp4_mtz_io.cpp:897:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( c = 0; c < lookup_o.size(); c++ )
                                    ^
ccp4/ccp4_mtz_io.cpp: In member function 'void clipper::CCP4MTZfile::import_hkl_list(clipper::HKL_info&)':
ccp4/ccp4_mtz_io.cpp:964:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < lookup_i.size(); i++ ) {
                                      ^
ccp4/ccp4_mtz_io.cpp: In member function 'std::vector<clipper::String> clipper::CCP4MTZfile::column_paths() const':
ccp4/ccp4_mtz_io.cpp:1351:34: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( x = 0; x < crystals.size(); x ++ )
                                  ^
ccp4/ccp4_mtz_io.cpp:1352:48: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( s = 0; s < crystals[x].datasets.size(); s ++ )
                                                ^
ccp4/ccp4_mtz_io.cpp:1353:61: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( c = 0; c < crystals[x].datasets[s].columns.size(); c ++ )
                                                             ^
ccp4/ccp4_mtz_io.cpp: In member function 'std::vector<clipper::String> clipper::CCP4MTZfile::column_labels() const':
ccp4/ccp4_mtz_io.cpp:1439:38: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int x = 0; x < crystals.size(); x++ )
                                      ^
ccp4/ccp4_mtz_io.cpp:1440:52: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int s = 0; s < crystals[x].datasets.size(); s++ )
                                                    ^
ccp4/ccp4_mtz_io.cpp:1441:65: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       for ( int c = 0; c < crystals[x].datasets[s].columns.size(); c++ )
                                                                 ^
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o ccp4/ccp4_map_io.lo ccp4/ccp4_map_io.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c ccp4/ccp4_map_io.cpp  -fPIC -DPIC -o ccp4/.libs/ccp4_map_io.o
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o ccp4/ccp4_utils.lo ccp4/ccp4_utils.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c ccp4/ccp4_utils.cpp  -fPIC -DPIC -o ccp4/.libs/ccp4_utils.o
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o cns/cns_hkl_io.lo cns/cns_hkl_io.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c cns/cns_hkl_io.cpp  -fPIC -DPIC -o cns/.libs/cns_hkl_io.o
ccp4/ccp4_utils.cpp: In constructor 'CCP4CommandInput::CCP4CommandInput(int, char**, bool)':
ccp4/ccp4_utils.cpp:64:29: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
      if ( i != std::string::npos ) {
                             ^
ccp4/ccp4_utils.cpp:70:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
        if ( i != std::string::npos ) {
                               ^
ccp4/ccp4_utils.cpp:73:26: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   if ( i != std::string::npos ) {
                          ^
ccp4/ccp4_utils.cpp:86:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 1; i < size(); i++ ) {
                               ^
cns/cns_hkl_io.cpp: In member function 'void clipper::CNS_HKLfile::close_read()':
cns/cns_hkl_io.cpp:180:37: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for ( int i = 0; i < fphis_i.size(); i++ ) fphis_i[i].first->update();
                                     ^
cns/cns_hkl_io.cpp:200:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 0; i < fphis_i.size(); i++ ) fphis[i][0]=fphis[i][1]=0.0;
                                       ^
cns/cns_hkl_io.cpp:224:36: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for ( int i = 0; i < fphis_i.size(); i++ )
                                    ^
cns/cns_hkl_io.cpp:236:39: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for ( int i = 0; i < fphis_i.size(); i++ )
                                       ^
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o cns/cns_map_io.lo cns/cns_map_io.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c cns/cns_map_io.cpp  -fPIC -DPIC -o cns/.libs/cns_map_io.o
cns/cns_map_io.cpp: In instantiation of 'void clipper::CNSMAPfile::export_nxmap(const clipper::NXmap<T>&) [with T = unsigned char]':
cns/cns_map_io.cpp:621:90:   required from here
cns/cns_map_io.cpp:412:9: warning: variable 'cp' set but not used [-Wunused-but-set-variable]
   float cp[6];
         ^
cns/cns_map_io.cpp: In instantiation of 'void clipper::CNSMAPfile::export_nxmap(const clipper::NXmap<T>&) [with T = char]':
cns/cns_map_io.cpp:622:72:   required from here
cns/cns_map_io.cpp:412:9: warning: variable 'cp' set but not used [-Wunused-but-set-variable]
cns/cns_map_io.cpp: In instantiation of 'void clipper::CNSMAPfile::export_nxmap(const clipper::NXmap<T>&) [with T = short unsigned int]':
cns/cns_map_io.cpp:623:92:   required from here
cns/cns_map_io.cpp:412:9: warning: variable 'cp' set but not used [-Wunused-but-set-variable]
cns/cns_map_io.cpp: In instantiation of 'void clipper::CNSMAPfile::export_nxmap(const clipper::NXmap<T>&) [with T = short int]':
cns/cns_map_io.cpp:624:74:   required from here
cns/cns_map_io.cpp:412:9: warning: variable 'cp' set but not used [-Wunused-but-set-variable]
cns/cns_map_io.cpp: In instantiation of 'void clipper::CNSMAPfile::export_nxmap(const clipper::NXmap<T>&) [with T = unsigned int]':
cns/cns_map_io.cpp:625:88:   required from here
cns/cns_map_io.cpp:412:9: warning: variable 'cp' set but not used [-Wunused-but-set-variable]
cns/cns_map_io.cpp: In instantiation of 'void clipper::CNSMAPfile::export_nxmap(const clipper::NXmap<T>&) [with T = int]':
cns/cns_map_io.cpp:626:70:   required from here
cns/cns_map_io.cpp:412:9: warning: variable 'cp' set but not used [-Wunused-but-set-variable]
cns/cns_map_io.cpp: In instantiation of 'void clipper::CNSMAPfile::export_nxmap(const clipper::NXmap<T>&) [with T = float]':
cns/cns_map_io.cpp:627:78:   required from here
cns/cns_map_io.cpp:412:9: warning: variable 'cp' set but not used [-Wunused-but-set-variable]
cns/cns_map_io.cpp: In instantiation of 'void clipper::CNSMAPfile::export_nxmap(const clipper::NXmap<T>&) [with T = double]':
cns/cns_map_io.cpp:628:78:   required from here
cns/cns_map_io.cpp:412:9: warning: variable 'cp' set but not used [-Wunused-but-set-variable]
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = unsigned char]':
cns/cns_map_io.cpp:202:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:205:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:209:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:212:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:223:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:235:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:243:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:252:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = char]':
cns/cns_map_io.cpp:202:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:205:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:209:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:212:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:223:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:235:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:243:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:252:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = short unsigned int]':
cns/cns_map_io.cpp:202:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:205:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:209:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:212:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:223:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:235:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:243:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:252:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = short int]':
cns/cns_map_io.cpp:202:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:205:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:209:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:212:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:223:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:235:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:243:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:252:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = unsigned int]':
cns/cns_map_io.cpp:202:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:205:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:209:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:212:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:223:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:235:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:243:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:252:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = int]':
cns/cns_map_io.cpp:202:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:205:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:209:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:212:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:223:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:235:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:243:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:252:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = float]':
cns/cns_map_io.cpp:202:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:205:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:209:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:212:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:223:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:235:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:243:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:252:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_xmap(clipper::Xmap<T>&) [with T = double]':
cns/cns_map_io.cpp:202:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:205:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:209:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:212:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:223:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:235:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:243:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:252:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = unsigned char]':
cns/cns_map_io.cpp:331:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:334:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:338:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:341:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:352:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:364:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:372:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:381:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = char]':
cns/cns_map_io.cpp:331:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:334:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:338:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:341:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:352:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:364:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:372:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:381:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = short unsigned int]':
cns/cns_map_io.cpp:331:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:334:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:338:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:341:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:352:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:364:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:372:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:381:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = short int]':
cns/cns_map_io.cpp:331:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:334:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:338:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:341:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:352:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:364:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:372:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:381:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = unsigned int]':
cns/cns_map_io.cpp:331:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:334:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:338:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:341:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:352:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:364:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:372:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:381:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = int]':
cns/cns_map_io.cpp:331:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:334:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:338:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:341:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:352:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:364:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:372:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:381:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = float]':
cns/cns_map_io.cpp:331:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:334:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:338:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:341:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:352:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:364:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:372:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:381:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'void clipper::CNSMAPfile::import_nxmap(clipper::NXmap<T>&) [with T = double]':
cns/cns_map_io.cpp:331:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:334:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:338:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:341:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:352:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:364:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:372:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:381:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'clipper::CNSMAPfile::ASUerror clipper::CNSMAPfile::import_xmap_check_asu(clipper::Xmap<T>&, T) [with T = float]':
cns/cns_map_io.cpp:497:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:500:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:504:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:507:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:518:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:536:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:544:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:553:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
cns/cns_map_io.cpp: In member function 'clipper::CNSMAPfile::ASUerror clipper::CNSMAPfile::import_xmap_check_asu(clipper::Xmap<T>&, T) [with T = double]':
cns/cns_map_io.cpp:497:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:500:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // could be blank line first
     ^
cns/cns_map_io.cpp:504:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);;
     ^
cns/cns_map_io.cpp:507:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:518:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:536:3: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
   fgets(buf,512,f);;
   ^
cns/cns_map_io.cpp:544:5: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
     fgets(buf,512,f);; // read slice number line
     ^
cns/cns_map_io.cpp:553:11: warning: ignoring return value of 'char* fgets(char*, int, FILE*)', declared with attribute warn_unused_result [-Wunused-result]
           fgets(buf,512,f);;
           ^
/bin/sh ../libtool  --tag=CXX   --mode=compile g++ -DHAVE_CONFIG_H -I. -I..  -I..   -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -c -o fortran/f_interface.lo fortran/f_interface.cpp
libtool: compile:  g++ -DHAVE_CONFIG_H -I. -I.. -I.. -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -c fortran/f_interface.cpp  -fPIC -DPIC -o fortran/.libs/f_interface.o
/bin/sh ../libtool  --tag=CXX   --mode=link g++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro  -o mmdb/libclipper-mmdb.la -rpath /usr/lib mmdb/clipper_mmdb.lo core/libclipper-core.la -lmmdb2 -lm 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  mmdb/.libs/clipper_mmdb.o   -Wl,-rpath -Wl,/builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs core/.libs/libclipper-core.so -lsrfftw -lsfftw -lpthread -lmmdb2 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-mmdb.so.2 -o mmdb/.libs/libclipper-mmdb.so.2.0.1
libtool: link: (cd "mmdb/.libs" && rm -f "libclipper-mmdb.so.2" && ln -s "libclipper-mmdb.so.2.0.1" "libclipper-mmdb.so.2")
libtool: link: (cd "mmdb/.libs" && rm -f "libclipper-mmdb.so" && ln -s "libclipper-mmdb.so.2.0.1" "libclipper-mmdb.so")
libtool: link: ( cd "mmdb/.libs" && rm -f "libclipper-mmdb.la" && ln -s "../libclipper-mmdb.la" "libclipper-mmdb.la" )
/bin/sh ../libtool  --tag=CXX   --mode=link g++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro  -o phs/libclipper-phs.la -rpath /usr/lib phs/phs_io.lo core/libclipper-core.la -lm 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  phs/.libs/phs_io.o   -Wl,-rpath -Wl,/builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs core/.libs/libclipper-core.so -lsrfftw -lsfftw -lpthread -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-phs.so.2 -o phs/.libs/libclipper-phs.so.2.0.1
libtool: link: (cd "phs/.libs" && rm -f "libclipper-phs.so.2" && ln -s "libclipper-phs.so.2.0.1" "libclipper-phs.so.2")
libtool: link: (cd "phs/.libs" && rm -f "libclipper-phs.so" && ln -s "libclipper-phs.so.2.0.1" "libclipper-phs.so")
libtool: link: ( cd "phs/.libs" && rm -f "libclipper-phs.la" && ln -s "../libclipper-phs.la" "libclipper-phs.la" )
/bin/sh ../libtool  --tag=CXX   --mode=link g++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro  -o cif/libclipper-cif.la -rpath /usr/lib cif/cif_data_io.lo core/libclipper-core.la -lmmdb2 -lm 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  cif/.libs/cif_data_io.o   -Wl,-rpath -Wl,/builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs core/.libs/libclipper-core.so -lsrfftw -lsfftw -lpthread -lmmdb2 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-cif.so.2 -o cif/.libs/libclipper-cif.so.2.0.1
libtool: link: (cd "cif/.libs" && rm -f "libclipper-cif.so.2" && ln -s "libclipper-cif.so.2.0.1" "libclipper-cif.so.2")
libtool: link: (cd "cif/.libs" && rm -f "libclipper-cif.so" && ln -s "libclipper-cif.so.2.0.1" "libclipper-cif.so")
libtool: link: ( cd "cif/.libs" && rm -f "libclipper-cif.la" && ln -s "../libclipper-cif.la" "libclipper-cif.la" )
/bin/sh ../libtool  --tag=CXX   --mode=link g++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro  -o fortran/libclipper-fortran.la -rpath /usr/lib fortran/f_interface.lo core/libclipper-core.la contrib/libclipper-contrib.la -lm 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  fortran/.libs/f_interface.o   -Wl,-rpath -Wl,/builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs -Wl,-rpath -Wl,/builddir/build/BUILD/clipper-2.1.20140911/clipper/contrib/.libs -L/builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs core/.libs/libclipper-core.so contrib/.libs/libclipper-contrib.so /builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -lpthread -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-fortran.so.2 -o fortran/.libs/libclipper-fortran.so.2.0.1
libtool: link: (cd "fortran/.libs" && rm -f "libclipper-fortran.so.2" && ln -s "libclipper-fortran.so.2.0.1" "libclipper-fortran.so.2")
libtool: link: (cd "fortran/.libs" && rm -f "libclipper-fortran.so" && ln -s "libclipper-fortran.so.2.0.1" "libclipper-fortran.so")
libtool: link: ( cd "fortran/.libs" && rm -f "libclipper-fortran.la" && ln -s "../libclipper-fortran.la" "libclipper-fortran.la" )
/bin/sh ../libtool  --tag=CXX   --mode=link g++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro  -o minimol/libclipper-minimol.la -rpath /usr/lib minimol/minimol.lo minimol/container_minimol.lo minimol/minimol_data.lo minimol/minimol_io.lo minimol/minimol_seq.lo minimol/minimol_utils.lo core/libclipper-core.la mmdb/libclipper-mmdb.la -lmmdb2 -lm 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  minimol/.libs/minimol.o minimol/.libs/container_minimol.o minimol/.libs/minimol_data.o minimol/.libs/minimol_io.o minimol/.libs/minimol_seq.o minimol/.libs/minimol_utils.o   -Wl,-rpath -Wl,/builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs -Wl,-rpath -Wl,/builddir/build/BUILD/clipper-2.1.20140911/clipper/mmdb/.libs -L/builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs core/.libs/libclipper-core.so mmdb/.libs/libclipper-mmdb.so /builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs/libclipper-core.so -lsrfftw -lsfftw -lpthread -lmmdb2 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-minimol.so.2 -o minimol/.libs/libclipper-minimol.so.2.0.1
libtool: link: (cd "minimol/.libs" && rm -f "libclipper-minimol.so.2" && ln -s "libclipper-minimol.so.2.0.1" "libclipper-minimol.so.2")
libtool: link: (cd "minimol/.libs" && rm -f "libclipper-minimol.so" && ln -s "libclipper-minimol.so.2.0.1" "libclipper-minimol.so")
libtool: link: ( cd "minimol/.libs" && rm -f "libclipper-minimol.la" && ln -s "../libclipper-minimol.la" "libclipper-minimol.la" )
/bin/sh ../libtool  --tag=CXX   --mode=link g++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro  -o ccp4/libclipper-ccp4.la -rpath /usr/lib ccp4/ccp4_mtz_types.lo ccp4/ccp4_mtz_io.lo ccp4/ccp4_map_io.lo ccp4/ccp4_utils.lo core/libclipper-core.la -lccp4c -lm 
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  ccp4/.libs/ccp4_mtz_types.o ccp4/.libs/ccp4_mtz_io.o ccp4/.libs/ccp4_map_io.o ccp4/.libs/ccp4_utils.o   -Wl,-rpath -Wl,/builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs core/.libs/libclipper-core.so -lsrfftw -lsfftw -lpthread -lccp4c -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-ccp4.so.2 -o ccp4/.libs/libclipper-ccp4.so.2.0.1
/bin/sh ../libtool  --tag=CXX   --mode=link g++  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -march=armv7-a -mfpu=vfpv3-d16  -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro  -o cns/libclipper-cns.la -rpath /usr/lib cns/cns_hkl_io.lo cns/cns_map_io.lo core/libclipper-core.la -lm 
libtool: link: (cd "ccp4/.libs" && rm -f "libclipper-ccp4.so.2" && ln -s "libclipper-ccp4.so.2.0.1" "libclipper-ccp4.so.2")
libtool: link: (cd "ccp4/.libs" && rm -f "libclipper-ccp4.so" && ln -s "libclipper-ccp4.so.2.0.1" "libclipper-ccp4.so")
libtool: link: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  cns/.libs/cns_hkl_io.o cns/.libs/cns_map_io.o   -Wl,-rpath -Wl,/builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs core/.libs/libclipper-core.so -lsrfftw -lsfftw -lpthread -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-cns.so.2 -o cns/.libs/libclipper-cns.so.2.0.1
libtool: link: ( cd "ccp4/.libs" && rm -f "libclipper-ccp4.la" && ln -s "../libclipper-ccp4.la" "libclipper-ccp4.la" )
libtool: link: (cd "cns/.libs" && rm -f "libclipper-cns.so.2" && ln -s "libclipper-cns.so.2.0.1" "libclipper-cns.so.2")
libtool: link: (cd "cns/.libs" && rm -f "libclipper-cns.so" && ln -s "libclipper-cns.so.2.0.1" "libclipper-cns.so")
libtool: link: ( cd "cns/.libs" && rm -f "libclipper-cns.la" && ln -s "../libclipper-cns.la" "libclipper-cns.la" )
make[3]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper'
make[2]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper'
Making all in examples
make[2]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/examples'
make[2]: Nothing to be done for `all'.
make[2]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/examples'
make[2]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911'
make[2]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911'
make[1]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911'
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.9ZPMxm
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm
++ dirname /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm
+ cd clipper-2.1.20140911
+ rm -rf /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm
+ make install DESTDIR=/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm 'INSTALL=install -p' 'CPPROG=cp -p'
Making install in clipper
make[1]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper'
Making install in core
make[2]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper/core'
make[3]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper/core'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib'
 /bin/sh ../../libtool   --mode=install install -p   libclipper-core.la '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib'
libtool: install: install -p .libs/libclipper-core.so.2.0.1 /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-core.so.2.0.1
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-core.so.2.0.1 libclipper-core.so.2 || { rm -f libclipper-core.so.2 && ln -s libclipper-core.so.2.0.1 libclipper-core.so.2; }; })
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-core.so.2.0.1 libclipper-core.so || { rm -f libclipper-core.so && ln -s libclipper-core.so.2.0.1 libclipper-core.so; }; })
libtool: install: install -p .libs/libclipper-core.lai /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-core.la
libtool: install: warning: remember to run `libtool --finish /usr/lib'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/core'
 install -p -m 644 atomsf.h container_types.h nxmap_operator.h cell.h coords.h ramachandran.h clipper_instance.h derivs.h resol_basisfn.h clipper_memory.h fftmap.h resol_fn.h clipper_message.h fftmap_sparse.h resol_targetfn.h clipper_precision.h hkl_compute.h rotation.h clipper_stats.h hkl_data.h spacegroup.h clipper_sysdep.h hkl_datatypes.h spacegroup_data.h clipper_test.h hkl_info.h symop.h clipper_types.h hkl_lookup.h clipper_util.h hkl_operators.h container.h map_interp.h xmap.h container_hkl.h map_utils.h container_map.h nxmap.h clipper_thread.h test_core.h '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/core'
 install -p -m 644 test_data.h '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/core'
make[3]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper/core'
make[2]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper/core'
Making install in contrib
make[2]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper/contrib'
make[3]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper/contrib'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib'
 /bin/sh ../../libtool   --mode=install install -p   libclipper-contrib.la '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib'
libtool: install: warning: relinking `libclipper-contrib.la'
libtool: install: (cd /builddir/build/BUILD/clipper-2.1.20140911/clipper/contrib; /bin/sh /builddir/build/BUILD/clipper-2.1.20140911/libtool  --tag CXX --mode=relink g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro -o libclipper-contrib.la -rpath /usr/lib convolution_search.lo sfcalc.lo edcalc.lo sfcalc_obs.lo fffear.lo sfscale.lo function_object_bases.lo sfweight.lo mapfilter.lo skeleton.lo originmatch.lo test_contrib.lo ../core/libclipper-core.la -lm -inst-prefix-dir /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm)
libtool: relink: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  .libs/convolution_search.o .libs/sfcalc.o .libs/edcalc.o .libs/sfcalc_obs.o .libs/fffear.o .libs/sfscale.o .libs/function_object_bases.o .libs/sfweight.o .libs/mapfilter.o .libs/skeleton.o .libs/originmatch.o .libs/test_contrib.o   -L/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib -L/usr/lib -lclipper-core -lsrfftw -lsfftw -lpthread -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-contrib.so.2 -o .libs/libclipper-contrib.so.2.0.1
libtool: install: install -p .libs/libclipper-contrib.so.2.0.1T /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-contrib.so.2.0.1
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-contrib.so.2.0.1 libclipper-contrib.so.2 || { rm -f libclipper-contrib.so.2 && ln -s libclipper-contrib.so.2.0.1 libclipper-contrib.so.2; }; })
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-contrib.so.2.0.1 libclipper-contrib.so || { rm -f libclipper-contrib.so && ln -s libclipper-contrib.so.2.0.1 libclipper-contrib.so; }; })
libtool: install: install -p .libs/libclipper-contrib.lai /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-contrib.la
libtool: install: warning: remember to run `libtool --finish /usr/lib'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/contrib'
 install -p -m 644 convolution_search.h mapfilter.h sfscale.h edcalc.h originmatch.h sfweight.h fffear.h sfcalc.h skeleton.h function_object_bases.h sfcalc_obs.h test_contrib.h '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/contrib'
make[3]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper/contrib'
make[2]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper/contrib'
make[2]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper'
make[3]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib'
 /bin/sh ../libtool   --mode=install install -p   mmdb/libclipper-mmdb.la minimol/libclipper-minimol.la phs/libclipper-phs.la cif/libclipper-cif.la ccp4/libclipper-ccp4.la cns/libclipper-cns.la fortran/libclipper-fortran.la '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib'
libtool: install: warning: relinking `mmdb/libclipper-mmdb.la'
libtool: install: (cd /builddir/build/BUILD/clipper-2.1.20140911/clipper; /bin/sh /builddir/build/BUILD/clipper-2.1.20140911/libtool  --tag CXX --mode=relink g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro -o mmdb/libclipper-mmdb.la -rpath /usr/lib mmdb/clipper_mmdb.lo core/libclipper-core.la -lmmdb2 -lm -inst-prefix-dir /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm)
libtool: relink: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  mmdb/.libs/clipper_mmdb.o   -L/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib -L/usr/lib -lclipper-core -lsrfftw -lsfftw -lpthread -lmmdb2 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-mmdb.so.2 -o mmdb/.libs/libclipper-mmdb.so.2.0.1
libtool: install: install -p mmdb/.libs/libclipper-mmdb.so.2.0.1T /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-mmdb.so.2.0.1
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-mmdb.so.2.0.1 libclipper-mmdb.so.2 || { rm -f libclipper-mmdb.so.2 && ln -s libclipper-mmdb.so.2.0.1 libclipper-mmdb.so.2; }; })
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-mmdb.so.2.0.1 libclipper-mmdb.so || { rm -f libclipper-mmdb.so && ln -s libclipper-mmdb.so.2.0.1 libclipper-mmdb.so; }; })
libtool: install: install -p mmdb/.libs/libclipper-mmdb.lai /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-mmdb.la
libtool: install: warning: relinking `minimol/libclipper-minimol.la'
libtool: install: (cd /builddir/build/BUILD/clipper-2.1.20140911/clipper; /bin/sh /builddir/build/BUILD/clipper-2.1.20140911/libtool  --tag CXX --mode=relink g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro -o minimol/libclipper-minimol.la -rpath /usr/lib minimol/minimol.lo minimol/container_minimol.lo minimol/minimol_data.lo minimol/minimol_io.lo minimol/minimol_seq.lo minimol/minimol_utils.lo core/libclipper-core.la mmdb/libclipper-mmdb.la -lmmdb2 -lm -inst-prefix-dir /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm)
libtool: relink: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  minimol/.libs/minimol.o minimol/.libs/container_minimol.o minimol/.libs/minimol_data.o minimol/.libs/minimol_io.o minimol/.libs/minimol_seq.o minimol/.libs/minimol_utils.o   -L/builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs -L/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib -L/usr/lib -lclipper-mmdb -lclipper-core -lsrfftw -lsfftw -lpthread -lmmdb2 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-minimol.so.2 -o minimol/.libs/libclipper-minimol.so.2.0.1
libtool: install: install -p minimol/.libs/libclipper-minimol.so.2.0.1T /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-minimol.so.2.0.1
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-minimol.so.2.0.1 libclipper-minimol.so.2 || { rm -f libclipper-minimol.so.2 && ln -s libclipper-minimol.so.2.0.1 libclipper-minimol.so.2; }; })
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-minimol.so.2.0.1 libclipper-minimol.so || { rm -f libclipper-minimol.so && ln -s libclipper-minimol.so.2.0.1 libclipper-minimol.so; }; })
libtool: install: install -p minimol/.libs/libclipper-minimol.lai /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-minimol.la
libtool: install: warning: relinking `phs/libclipper-phs.la'
libtool: install: (cd /builddir/build/BUILD/clipper-2.1.20140911/clipper; /bin/sh /builddir/build/BUILD/clipper-2.1.20140911/libtool  --tag CXX --mode=relink g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro -o phs/libclipper-phs.la -rpath /usr/lib phs/phs_io.lo core/libclipper-core.la -lm -inst-prefix-dir /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm)
libtool: relink: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  phs/.libs/phs_io.o   -L/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib -L/usr/lib -lclipper-core -lsrfftw -lsfftw -lpthread -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-phs.so.2 -o phs/.libs/libclipper-phs.so.2.0.1
libtool: install: install -p phs/.libs/libclipper-phs.so.2.0.1T /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-phs.so.2.0.1
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-phs.so.2.0.1 libclipper-phs.so.2 || { rm -f libclipper-phs.so.2 && ln -s libclipper-phs.so.2.0.1 libclipper-phs.so.2; }; })
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-phs.so.2.0.1 libclipper-phs.so || { rm -f libclipper-phs.so && ln -s libclipper-phs.so.2.0.1 libclipper-phs.so; }; })
libtool: install: install -p phs/.libs/libclipper-phs.lai /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-phs.la
libtool: install: warning: relinking `cif/libclipper-cif.la'
libtool: install: (cd /builddir/build/BUILD/clipper-2.1.20140911/clipper; /bin/sh /builddir/build/BUILD/clipper-2.1.20140911/libtool  --tag CXX --mode=relink g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro -o cif/libclipper-cif.la -rpath /usr/lib cif/cif_data_io.lo core/libclipper-core.la -lmmdb2 -lm -inst-prefix-dir /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm)
libtool: relink: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  cif/.libs/cif_data_io.o   -L/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib -L/usr/lib -lclipper-core -lsrfftw -lsfftw -lpthread -lmmdb2 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-cif.so.2 -o cif/.libs/libclipper-cif.so.2.0.1
libtool: install: install -p cif/.libs/libclipper-cif.so.2.0.1T /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-cif.so.2.0.1
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-cif.so.2.0.1 libclipper-cif.so.2 || { rm -f libclipper-cif.so.2 && ln -s libclipper-cif.so.2.0.1 libclipper-cif.so.2; }; })
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-cif.so.2.0.1 libclipper-cif.so || { rm -f libclipper-cif.so && ln -s libclipper-cif.so.2.0.1 libclipper-cif.so; }; })
libtool: install: install -p cif/.libs/libclipper-cif.lai /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-cif.la
libtool: install: warning: relinking `ccp4/libclipper-ccp4.la'
libtool: install: (cd /builddir/build/BUILD/clipper-2.1.20140911/clipper; /bin/sh /builddir/build/BUILD/clipper-2.1.20140911/libtool  --tag CXX --mode=relink g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro -o ccp4/libclipper-ccp4.la -rpath /usr/lib ccp4/ccp4_mtz_types.lo ccp4/ccp4_mtz_io.lo ccp4/ccp4_map_io.lo ccp4/ccp4_utils.lo core/libclipper-core.la -lccp4c -lm -inst-prefix-dir /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm)
libtool: relink: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  ccp4/.libs/ccp4_mtz_types.o ccp4/.libs/ccp4_mtz_io.o ccp4/.libs/ccp4_map_io.o ccp4/.libs/ccp4_utils.o   -L/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib -L/usr/lib -lclipper-core -lsrfftw -lsfftw -lpthread -lccp4c -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-ccp4.so.2 -o ccp4/.libs/libclipper-ccp4.so.2.0.1
libtool: install: install -p ccp4/.libs/libclipper-ccp4.so.2.0.1T /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-ccp4.so.2.0.1
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-ccp4.so.2.0.1 libclipper-ccp4.so.2 || { rm -f libclipper-ccp4.so.2 && ln -s libclipper-ccp4.so.2.0.1 libclipper-ccp4.so.2; }; })
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-ccp4.so.2.0.1 libclipper-ccp4.so || { rm -f libclipper-ccp4.so && ln -s libclipper-ccp4.so.2.0.1 libclipper-ccp4.so; }; })
libtool: install: install -p ccp4/.libs/libclipper-ccp4.lai /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-ccp4.la
libtool: install: warning: relinking `cns/libclipper-cns.la'
libtool: install: (cd /builddir/build/BUILD/clipper-2.1.20140911/clipper; /bin/sh /builddir/build/BUILD/clipper-2.1.20140911/libtool  --tag CXX --mode=relink g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro -o cns/libclipper-cns.la -rpath /usr/lib cns/cns_hkl_io.lo cns/cns_map_io.lo core/libclipper-core.la -lm -inst-prefix-dir /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm)
libtool: relink: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  cns/.libs/cns_hkl_io.o cns/.libs/cns_map_io.o   -L/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib -L/usr/lib -lclipper-core -lsrfftw -lsfftw -lpthread -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-cns.so.2 -o cns/.libs/libclipper-cns.so.2.0.1
libtool: install: install -p cns/.libs/libclipper-cns.so.2.0.1T /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-cns.so.2.0.1
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-cns.so.2.0.1 libclipper-cns.so.2 || { rm -f libclipper-cns.so.2 && ln -s libclipper-cns.so.2.0.1 libclipper-cns.so.2; }; })
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-cns.so.2.0.1 libclipper-cns.so || { rm -f libclipper-cns.so && ln -s libclipper-cns.so.2.0.1 libclipper-cns.so; }; })
libtool: install: install -p cns/.libs/libclipper-cns.lai /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-cns.la
libtool: install: warning: relinking `fortran/libclipper-fortran.la'
libtool: install: (cd /builddir/build/BUILD/clipper-2.1.20140911/clipper; /bin/sh /builddir/build/BUILD/clipper-2.1.20140911/libtool  --tag CXX --mode=relink g++ -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -version-info 2:1 -Wl,-z,relro -o fortran/libclipper-fortran.la -rpath /usr/lib fortran/f_interface.lo core/libclipper-core.la contrib/libclipper-contrib.la -lm -inst-prefix-dir /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm)
libtool: relink: g++  -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crti.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtbeginS.o  fortran/.libs/f_interface.o   -L/builddir/build/BUILD/clipper-2.1.20140911/clipper/core/.libs -L/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib -L/usr/lib -lclipper-contrib -lclipper-core -lsrfftw -lsfftw -lpthread -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5 -L/usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/crtendS.o /usr/lib/gcc/armv7hl-redhat-linux-gnueabi/4.8.5/../../../crtn.o  -O2 -march=armv7-a -mfpu=vfpv3-d16 -mfloat-abi=hard -Wl,-z -Wl,relro   -Wl,-soname -Wl,libclipper-fortran.so.2 -o fortran/.libs/libclipper-fortran.so.2.0.1
libtool: install: install -p fortran/.libs/libclipper-fortran.so.2.0.1T /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-fortran.so.2.0.1
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-fortran.so.2.0.1 libclipper-fortran.so.2 || { rm -f libclipper-fortran.so.2 && ln -s libclipper-fortran.so.2.0.1 libclipper-fortran.so.2; }; })
libtool: install: (cd /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib && { ln -s -f libclipper-fortran.so.2.0.1 libclipper-fortran.so || { rm -f libclipper-fortran.so && ln -s libclipper-fortran.so.2.0.1 libclipper-fortran.so; }; })
libtool: install: install -p fortran/.libs/libclipper-fortran.lai /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-fortran.la
libtool: install: warning: remember to run `libtool --finish /usr/lib'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/ccp4'
 install -p -m 644 ccp4/ccp4_map_io.h ccp4/ccp4_mtz_io.h ccp4/ccp4_mtz_types.h ccp4/ccp4_utils.h '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/ccp4'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/cif'
 install -p -m 644 cif/cif_data_io.h '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/cif'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/cns'
 install -p -m 644 cns/cns_hkl_io.h cns/cns_map_io.h '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/cns'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/minimol'
 install -p -m 644 minimol/container_minimol.h minimol/minimol_data.h minimol/minimol_seq.h minimol/minimol.h minimol/minimol_io.h minimol/minimol_utils.h '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/minimol'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/mmdb'
 install -p -m 644 mmdb/clipper_mmdb.h '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/mmdb'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/phs'
 install -p -m 644 phs/phs_io.h '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper/phs'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper'
 install -p -m 644 clipper-ccp4.h clipper-contrib.h clipper-phs.h clipper-cctbx.h clipper-minimol.h clipper.h clipper-cif.h clipper-mmdb.h minimal-clipper-hkl.h clipper-cns.h minimal-clipper-map.h '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/include/clipper'
make[3]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper'
make[2]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper'
make[1]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/clipper'
Making install in examples
make[1]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/examples'
make[2]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911/examples'
make[2]: Nothing to be done for `install-exec-am'.
make[2]: Nothing to be done for `install-data-am'.
make[2]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/examples'
make[1]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911/examples'
make[1]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911'
make[2]: Entering directory `/builddir/build/BUILD/clipper-2.1.20140911'
make[2]: Nothing to be done for `install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/pkgconfig'
 install -p -m 644 clipper.pc '/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/pkgconfig'
make[2]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911'
make[1]: Leaving directory `/builddir/build/BUILD/clipper-2.1.20140911'
+ rm -f /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-ccp4.la /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-cif.la /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-cns.la /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-contrib.la /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-core.la /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-fortran.la /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-minimol.la /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-mmdb.la /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-phs.la
+ /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 /builddir/build/BUILD/clipper-2.1.20140911
extracting debug info from /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-minimol.so.2.0.1
extracting debug info from /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-core.so.2.0.1
extracting debug info from /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-contrib.so.2.0.1
extracting debug info from /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-mmdb.so.2.0.1
extracting debug info from /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-cns.so.2.0.1
extracting debug info from /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-ccp4.so.2.0.1
extracting debug info from /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-fortran.so.2.0.1
extracting debug info from /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-phs.so.2.0.1
extracting debug info from /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/lib/libclipper-cif.so.2.0.1
/usr/lib/rpm/sepdebugcrcfix: Updated 9 CRC32s, 0 CRC32s did match.
symlinked /usr/lib/debug/usr/lib/libclipper-minimol.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-minimol.so.2.debug
symlinked /usr/lib/debug/usr/lib/libclipper-contrib.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-contrib.so.debug
symlinked /usr/lib/debug/usr/lib/libclipper-contrib.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-contrib.so.2.debug
symlinked /usr/lib/debug/usr/lib/libclipper-core.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-core.so.debug
symlinked /usr/lib/debug/usr/lib/libclipper-cns.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-cns.so.debug
symlinked /usr/lib/debug/usr/lib/libclipper-cif.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-cif.so.2.debug
symlinked /usr/lib/debug/usr/lib/libclipper-minimol.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-minimol.so.debug
symlinked /usr/lib/debug/usr/lib/libclipper-fortran.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-fortran.so.debug
symlinked /usr/lib/debug/usr/lib/libclipper-mmdb.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-mmdb.so.debug
symlinked /usr/lib/debug/usr/lib/libclipper-cns.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-cns.so.2.debug
symlinked /usr/lib/debug/usr/lib/libclipper-phs.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-phs.so.2.debug
symlinked /usr/lib/debug/usr/lib/libclipper-cif.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-cif.so.debug
symlinked /usr/lib/debug/usr/lib/libclipper-core.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-core.so.2.debug
symlinked /usr/lib/debug/usr/lib/libclipper-ccp4.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-ccp4.so.debug
symlinked /usr/lib/debug/usr/lib/libclipper-phs.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-phs.so.debug
symlinked /usr/lib/debug/usr/lib/libclipper-fortran.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-fortran.so.2.debug
symlinked /usr/lib/debug/usr/lib/libclipper-mmdb.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-mmdb.so.2.debug
symlinked /usr/lib/debug/usr/lib/libclipper-ccp4.so.2.0.1.debug to /usr/lib/debug/usr/lib/libclipper-ccp4.so.2.debug
3173 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-java-repack-jars
Processing files: clipper-2.1-26.20140911.el7.armv7hl
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.wVgkxG
+ umask 022
+ cd /builddir/build/BUILD
+ cd clipper-2.1.20140911
+ DOCDIR=/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/share/doc/clipper-2.1
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/share/doc/clipper-2.1
+ cp -pr README /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/share/doc/clipper-2.1
+ cp -pr AUTHORS /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/share/doc/clipper-2.1
+ cp -pr COPYING /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/share/doc/clipper-2.1
+ exit 0
Provides: clipper = 2.1-26.20140911.el7 clipper(armv7hl-32) = 2.1-26.20140911.el7 libclipper-ccp4.so.2 libclipper-cif.so.2 libclipper-cns.so.2 libclipper-contrib.so.2 libclipper-core.so.2 libclipper-fortran.so.2 libclipper-minimol.so.2 libclipper-mmdb.so.2 libclipper-phs.so.2
Requires(interp): /sbin/ldconfig /sbin/ldconfig
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires(post): /sbin/ldconfig
Requires(postun): /sbin/ldconfig
Requires: ld-linux-armhf.so.3 ld-linux-armhf.so.3(GLIBC_2.4) libc.so.6 libc.so.6(GLIBC_2.4) libccp4c.so.0 libclipper-contrib.so.2 libclipper-core.so.2 libclipper-mmdb.so.2 libgcc_s.so.1 libgcc_s.so.1(GCC_3.5) libgcc_s.so.1(GCC_4.0.0) libm.so.6 libm.so.6(GLIBC_2.4) libmmdb2.so.0 libpthread.so.0 libpthread.so.0(GLIBC_2.4) libsfftw.so.2 libsrfftw.so.2 libstdc++.so.6 libstdc++.so.6(CXXABI_1.3) libstdc++.so.6(CXXABI_1.3.1) libstdc++.so.6(CXXABI_ARM_1.3.3) libstdc++.so.6(GLIBCXX_3.4) libstdc++.so.6(GLIBCXX_3.4.11) libstdc++.so.6(GLIBCXX_3.4.9) rtld(GNU_HASH)
Processing files: clipper-devel-2.1-26.20140911.el7.armv7hl
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.HMKQ9s
+ umask 022
+ cd /builddir/build/BUILD
+ cd clipper-2.1.20140911
+ DOCDIR=/builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/share/doc/clipper-devel-2.1
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/share/doc/clipper-devel-2.1
+ cp -pr dox /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm/usr/share/doc/clipper-devel-2.1
+ exit 0
Provides: clipper-devel = 2.1-26.20140911.el7 clipper-devel(armv7hl-32) = 2.1-26.20140911.el7 pkgconfig(clipper) = 2.1.20140911
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/pkg-config libclipper-ccp4.so.2 libclipper-cif.so.2 libclipper-cns.so.2 libclipper-contrib.so.2 libclipper-core.so.2 libclipper-fortran.so.2 libclipper-minimol.so.2 libclipper-mmdb.so.2 libclipper-phs.so.2 pkgconfig(libccp4c) pkgconfig(mmdb2)
Processing files: clipper-debuginfo-2.1-26.20140911.el7.armv7hl
Provides: clipper-debuginfo = 2.1-26.20140911.el7 clipper-debuginfo(armv7hl-32) = 2.1-26.20140911.el7
Requires(rpmlib): rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 rpmlib(CompressedFileNames) <= 3.0.4-1
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm
Wrote: /builddir/build/RPMS/clipper-2.1-26.20140911.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/clipper-devel-2.1-26.20140911.el7.armv7hl.rpm
Wrote: /builddir/build/RPMS/clipper-debuginfo-2.1-26.20140911.el7.armv7hl.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.876SYN
+ umask 022
+ cd /builddir/build/BUILD
+ cd clipper-2.1.20140911
+ rm -rf /builddir/build/BUILDROOT/clipper-2.1-26.20140911.el7.arm
+ exit 0
Child return code was: 0
LEAVE do -->